RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 NACAP1Q9BZK3 213 aa17.4■□□□□ 0.38
HSPG2-207ENST00000453796 VCPKMTQ9H867 229 aa17.4■□□□□ 0.38
HSPG2-207ENST00000453796 KANSL2Q9H9L4 492 aa17.4■□□□□ 0.38
HSPG2-207ENST00000453796 ARHGEF10LQ9HCE6 1279 aa17.4■□□□□ 0.38
HSPG2-207ENST00000453796 GJD2Q9UKL4 321 aa17.4■□□□□ 0.38
HSPG2-207ENST00000453796 RABGAP1Q9Y3P9 1069 aa17.4■□□□□ 0.38
HSPG2-207ENST00000453796 SPDYE16A6NNV3 312 aaPredicted RBP17.39■□□□□ 0.37
HSPG2-207ENST00000453796 EEF2P13639 858 aaKnown RBP17.39■□□□□ 0.37
HSPG2-207ENST00000453796 MTFR1Q15390 333 aa17.39■□□□□ 0.37
HSPG2-207ENST00000453796 VPS53Q5VIR6 699 aa17.39■□□□□ 0.37
HSPG2-207ENST00000453796 STK11IPQ8N1F8 1099 aa17.39■□□□□ 0.37
HSPG2-207ENST00000453796 PXYLP1Q8TE99 480 aa17.39■□□□□ 0.37
HSPG2-207ENST00000453796 LPAR1Q92633 364 aa17.39■□□□□ 0.37
HSPG2-207ENST00000453796 NAPBQ9H115 298 aa17.39■□□□□ 0.37
HSPG2-207ENST00000453796 IGKV6D-41A0A0C4DH26 115 aa17.38■□□□□ 0.37
HSPG2-207ENST00000453796 ADCY3O60266 1144 aa17.38■□□□□ 0.37
HSPG2-207ENST00000453796 PDE4AP27815 886 aa17.38■□□□□ 0.37
HSPG2-207ENST00000453796 PPARAQ07869 468 aa17.38■□□□□ 0.37
HSPG2-207ENST00000453796 PAGR1Q9BTK6 254 aa17.38■□□□□ 0.37
HSPG2-207ENST00000453796 PORCNQ9H237 461 aa17.38■□□□□ 0.37
HSPG2-207ENST00000453796 SH2D4AQ9H788 454 aa17.38■□□□□ 0.37
HSPG2-207ENST00000453796 MKNK2Q9HBH9 465 aa17.38■□□□□ 0.37
HSPG2-207ENST00000453796 BTBD7Q9P203 1132 aa17.38■□□□□ 0.37
HSPG2-207ENST00000453796 PLIN4Q96Q06 1357 aa17.38■□□□□ 0.37
HSPG2-207ENST00000453796 PDE4DIPQ5VU43 2346 aa17.37■□□□□ 0.37
HSPG2-207ENST00000453796 TRIM6-TRIM34B2RNG4 842 aa17.37■□□□□ 0.37
HSPG2-207ENST00000453796 EN2P19622 333 aaPredicted RBP17.37■□□□□ 0.37
HSPG2-207ENST00000453796 NMIQ13287 307 aaPredicted RBP17.37■□□□□ 0.37
HSPG2-207ENST00000453796 ALX1Q15699 326 aa17.37■□□□□ 0.37
HSPG2-207ENST00000453796 MCMDC2Q4G0Z9 681 aa17.37■□□□□ 0.37
HSPG2-207ENST00000453796 ZNF589Q86UQ0 364 aaPredicted RBP17.37■□□□□ 0.37
HSPG2-207ENST00000453796 RILPL2Q969X0 211 aa17.37■□□□□ 0.37
HSPG2-207ENST00000453796 TMEM106CQ9BVX2 250 aa17.37■□□□□ 0.37
HSPG2-207ENST00000453796 NYAP2Q9P242 653 aa17.37■□□□□ 0.37
HSPG2-207ENST00000453796 LAMA4Q16363 1823 aa17.36■□□□□ 0.37
HSPG2-207ENST00000453796 WDR46O15213 610 aaKnown RBP17.36■□□□□ 0.37
HSPG2-207ENST00000453796 PRDM1O75626 825 aa17.36■□□□□ 0.37
HSPG2-207ENST00000453796 ELNP15502 786 aa17.36■□□□□ 0.37
HSPG2-207ENST00000453796 MAPK4P31152 587 aa17.36■□□□□ 0.37
HSPG2-207ENST00000453796 COG2Q14746 738 aa17.36■□□□□ 0.37
HSPG2-207ENST00000453796 SPICE1Q8N0Z3 855 aa17.36■□□□□ 0.37
HSPG2-207ENST00000453796 ZNF287Q9HBT7 754 aa17.36■□□□□ 0.37
HSPG2-207ENST00000453796 ANAPC4Q9UJX5 808 aa17.36■□□□□ 0.37
HSPG2-207ENST00000453796 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.36■□□□□ 0.37
HSPG2-207ENST00000453796 TACC3Q9Y6A5 838 aa17.36■□□□□ 0.37
HSPG2-207ENST00000453796 ZNF236Q9UL36 1845 aa17.35■□□□□ 0.37
HSPG2-207ENST00000453796 ZNFX1Q9P2E3 1918 aaKnown RBP17.35■□□□□ 0.37
HSPG2-207ENST00000453796 MYCP01106 439 aaPredicted RBP17.35■□□□□ 0.37
HSPG2-207ENST00000453796 SDSP20132 328 aa17.35■□□□□ 0.37
HSPG2-207ENST00000453796 GPR142Q7Z601 462 aa17.35■□□□□ 0.37
HSPG2-207ENST00000453796 ZNF444Q8N0Y2 327 aaPredicted RBP17.35■□□□□ 0.37
HSPG2-207ENST00000453796 USP6NLQ92738 828 aa17.35■□□□□ 0.37
HSPG2-207ENST00000453796 TANGO6Q9C0B7 1094 aa17.35■□□□□ 0.37
HSPG2-207ENST00000453796 HOXC10Q9NYD6 342 aa17.35■□□□□ 0.37
HSPG2-207ENST00000453796 ZMYM6O95789 1325 aa17.34■□□□□ 0.37
HSPG2-207ENST00000453796 INHAP05111 366 aa17.34■□□□□ 0.37
HSPG2-207ENST00000453796 HSPD1P10809 573 aaKnown RBP17.34■□□□□ 0.37
HSPG2-207ENST00000453796 CCL5P13501 91 aa17.34■□□□□ 0.37
HSPG2-207ENST00000453796 DSG3P32926 999 aa17.34■□□□□ 0.37
HSPG2-207ENST00000453796 UBXN2AP68543 259 aa17.34■□□□□ 0.37
HSPG2-207ENST00000453796 ATP2B2Q01814 1243 aa17.34■□□□□ 0.37
HSPG2-207ENST00000453796 CTDSPL2Q05D32 466 aa17.34■□□□□ 0.37
HSPG2-207ENST00000453796 PDE4BQ07343 736 aa17.34■□□□□ 0.37
HSPG2-207ENST00000453796 MORN1Q5T089 497 aa17.34■□□□□ 0.37
HSPG2-207ENST00000453796 CCDC171Q6TFL3 1326 aa17.34■□□□□ 0.37
HSPG2-207ENST00000453796 NEDD1Q8NHV4 660 aa17.34■□□□□ 0.37
HSPG2-207ENST00000453796 GOPCQ9HD26 462 aa17.34■□□□□ 0.37
HSPG2-207ENST00000453796 MTMR4Q9NYA4 1195 aa17.34■□□□□ 0.37
HSPG2-207ENST00000453796 FGAP02671 866 aa17.33■□□□□ 0.36
HSPG2-207ENST00000453796 FGRP09769 529 aa17.33■□□□□ 0.36
HSPG2-207ENST00000453796 CCNA1P78396 465 aa17.33■□□□□ 0.36
HSPG2-207ENST00000453796 PLEKHH3Q7Z736 793 aa17.33■□□□□ 0.36
HSPG2-207ENST00000453796 SOCS4Q8WXH5 440 aa17.33■□□□□ 0.36
HSPG2-207ENST00000453796 MKL1Q969V6 931 aa17.33■□□□□ 0.36
HSPG2-207ENST00000453796 SHISA4Q96DD7 197 aa17.33■□□□□ 0.36
HSPG2-207ENST00000453796 CEP95Q96GE4 821 aa17.33■□□□□ 0.36
HSPG2-207ENST00000453796 NUDT12Q9BQG2 462 aa17.33■□□□□ 0.36
HSPG2-207ENST00000453796 ADAMTS5Q9UNA0 930 aa17.33■□□□□ 0.36
HSPG2-207ENST00000453796 FLOT1O75955 427 aa17.32■□□□□ 0.36
HSPG2-207ENST00000453796 GJB1P08034 283 aa17.32■□□□□ 0.36
HSPG2-207ENST00000453796 SLC3A2P08195 630 aaKnown RBP17.32■□□□□ 0.36
HSPG2-207ENST00000453796 XRCC5P13010 732 aaKnown RBP17.32■□□□□ 0.36
HSPG2-207ENST00000453796 GSPT1P15170 499 aaKnown RBP17.32■□□□□ 0.36
HSPG2-207ENST00000453796 FAM47AQ5JRC9 791 aa17.32■□□□□ 0.36
HSPG2-207ENST00000453796 MB21D1Q8N884 522 aa17.32■□□□□ 0.36
HSPG2-207ENST00000453796 TRIB2Q92519 343 aa17.32■□□□□ 0.36
HSPG2-207ENST00000453796 ATG4CQ96DT6 458 aa17.32■□□□□ 0.36
HSPG2-207ENST00000453796 UNC93B1Q9H1C4 597 aa17.32■□□□□ 0.36
HSPG2-207ENST00000453796 INCENPQ9NQS7 918 aa17.32■□□□□ 0.36
HSPG2-207ENST00000453796 BIN2Q9UBW5 565 aaPredicted RBP17.32■□□□□ 0.36
HSPG2-207ENST00000453796 CLIP2Q9UDT6 1046 aa17.32■□□□□ 0.36
HSPG2-207ENST00000453796 SYNPO2Q9UMS6 1093 aa17.32■□□□□ 0.36
HSPG2-207ENST00000453796 F5H6K3 240 aa17.31■□□□□ 0.36
HSPG2-207ENST00000453796 HMGCRP04035 888 aa17.31■□□□□ 0.36
HSPG2-207ENST00000453796 CYP2B6P20813 491 aa17.31■□□□□ 0.36
HSPG2-207ENST00000453796 GJA8P48165 433 aa17.31■□□□□ 0.36
HSPG2-207ENST00000453796 TFAP4Q01664 338 aa17.31■□□□□ 0.36
HSPG2-207ENST00000453796 KLRC3Q07444 240 aa17.31■□□□□ 0.36
HSPG2-207ENST00000453796 FAM83BQ5T0W9 1011 aa17.31■□□□□ 0.36
HSPG2-207ENST00000453796 MOV10L1Q9BXT6 1211 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms