RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 MTMR7Q9Y216 660 aa22.77■■□□□ 1.24
APTR-204ENST00000440088 ELP1O95163 1332 aa22.76■■□□□ 1.23
APTR-204ENST00000440088 ZNF541Q9H0D2 1346 aa22.76■■□□□ 1.23
APTR-204ENST00000440088 DICER1Q9UPY3 1922 aaKnown RBP22.76■■□□□ 1.23
APTR-204ENST00000440088 PKN1Q16512 942 aa22.76■■□□□ 1.23
APTR-204ENST00000440088 STAG2Q8N3U4 1231 aa22.76■■□□□ 1.23
APTR-204ENST00000440088 GPT2Q8TD30 523 aa22.76■■□□□ 1.23
APTR-204ENST00000440088 ZNF396Q96N95 335 aaPredicted RBP22.76■■□□□ 1.23
APTR-204ENST00000440088 GNL2Q13823 731 aaKnown RBP22.75■■□□□ 1.23
APTR-204ENST00000440088 SPATA32Q96LK8 384 aa22.75■■□□□ 1.23
APTR-204ENST00000440088 LZTS2Q9BRK4 669 aa22.75■■□□□ 1.23
APTR-204ENST00000440088 GZF1Q9H116 711 aaPredicted RBP22.75■■□□□ 1.23
APTR-204ENST00000440088 CLIP2Q9UDT6 1046 aa22.75■■□□□ 1.23
APTR-204ENST00000440088 CNOT7Q9UIV1 285 aaKnown RBP22.75■■□□□ 1.23
APTR-204ENST00000440088 PALM3A6NDB9 673 aaPredicted RBP22.75■■□□□ 1.23
APTR-204ENST00000440088 MMP1P03956 469 aa22.75■■□□□ 1.23
APTR-204ENST00000440088 PARP1P09874 1014 aaKnown RBP22.75■■□□□ 1.23
APTR-204ENST00000440088 UBE2HP62256 183 aa22.75■■□□□ 1.23
APTR-204ENST00000440088 SAFBQ15424 915 aaKnown RBP eCLIP22.75■■□□□ 1.23
APTR-204ENST00000440088 BAZ2BQ9UIF8 2168 aaKnown RBP22.74■■□□□ 1.23
APTR-204ENST00000440088 KIF28PB7ZC32 967 aa22.74■■□□□ 1.23
APTR-204ENST00000440088 GADD45BO75293 160 aaPredicted RBP22.74■■□□□ 1.23
APTR-204ENST00000440088 RBM26Q5T8P6 1007 aaKnown RBP22.74■■□□□ 1.23
APTR-204ENST00000440088 CLEC10AQ8IUN9 316 aa22.74■■□□□ 1.23
APTR-204ENST00000440088 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.74■■□□□ 1.23
APTR-204ENST00000440088 SRCAPQ6ZRS2 3230 aa22.74■■□□□ 1.23
APTR-204ENST00000440088 hCG_1642624A0A1W2PR95 340 aa22.74■■□□□ 1.23
APTR-204ENST00000440088 TNNI2P48788 182 aa22.74■■□□□ 1.23
APTR-204ENST00000440088 GSE1Q14687 1217 aa22.74■■□□□ 1.23
APTR-204ENST00000440088 TMEM179Q6ZVK1 233 aa22.74■■□□□ 1.23
APTR-204ENST00000440088 LEO1Q8WVC0 666 aaPredicted RBP22.74■■□□□ 1.23
APTR-204ENST00000440088 TMEM39BQ9GZU3 492 aa22.74■■□□□ 1.23
APTR-204ENST00000440088 KANSL2Q9H9L4 492 aa22.74■■□□□ 1.23
APTR-204ENST00000440088 U2AF2P26368 475 aaKnown RBP eCLIP22.73■■□□□ 1.231e-6■■■□□ 15.6
APTR-204ENST00000440088 TNFAIP1Q13829 316 aa22.73■■□□□ 1.23
APTR-204ENST00000440088 ABCB5Q2M3G0 1257 aa22.73■■□□□ 1.23
APTR-204ENST00000440088 LRRC47Q8N1G4 583 aaKnown RBP22.73■■□□□ 1.23
APTR-204ENST00000440088 SBF1O95248 1867 aa22.73■■□□□ 1.23
APTR-204ENST00000440088 KLRF2D3W0D1 207 aa22.72■■□□□ 1.23
APTR-204ENST00000440088 EGFRP00533 1210 aa22.72■■□□□ 1.23
APTR-204ENST00000440088 MYSM1Q5VVJ2 828 aa22.72■■□□□ 1.23
APTR-204ENST00000440088 KCNJ14Q9UNX9 436 aa22.72■■□□□ 1.23
APTR-204ENST00000440088 MYH4Q9Y623 1939 aa22.72■■□□□ 1.23
APTR-204ENST00000440088 PDHBP11177 359 aa22.72■■□□□ 1.23
APTR-204ENST00000440088 SCG2P13521 617 aa22.72■■□□□ 1.23
APTR-204ENST00000440088 USP17L2Q6R6M4 530 aa22.72■■□□□ 1.23
APTR-204ENST00000440088 SAMD7Q7Z3H4 446 aa22.72■■□□□ 1.23
APTR-204ENST00000440088 VPS54Q9P1Q0 977 aa22.72■■□□□ 1.23
APTR-204ENST00000440088 GOLGA8HP0CJ92 632 aa22.71■■□□□ 1.23
APTR-204ENST00000440088 ATP2B2Q01814 1243 aa22.71■■□□□ 1.23
APTR-204ENST00000440088 PFKFB3Q16875 520 aaPredicted RBP22.71■■□□□ 1.23
APTR-204ENST00000440088 DIS3L2Q8IYB7 885 aaKnown RBP22.71■■□□□ 1.23
APTR-204ENST00000440088 GPC2Q8N158 579 aa22.71■■□□□ 1.23
APTR-204ENST00000440088 USP28Q96RU2 1077 aa22.71■■□□□ 1.23
APTR-204ENST00000440088 CABP5Q9NP86 173 aa22.71■■□□□ 1.23
APTR-204ENST00000440088 NYAP2Q9P242 653 aa22.71■■□□□ 1.23
APTR-204ENST00000440088 USP17L5A8MUK1 530 aa22.7■■□□□ 1.23
APTR-204ENST00000440088 H7C1D1 291 aa22.7■■□□□ 1.23
APTR-204ENST00000440088 GDF11O95390 407 aa22.7■■□□□ 1.23
APTR-204ENST00000440088 SNHG28P0DPA3 235 aa22.7■■□□□ 1.23
APTR-204ENST00000440088 SMARCA1P28370 1054 aa22.7■■□□□ 1.23
APTR-204ENST00000440088 CEBPZQ03701 1054 aaKnown RBP22.7■■□□□ 1.23
APTR-204ENST00000440088 TBC1D10BQ4KMP7 808 aaPredicted RBP22.7■■□□□ 1.23
APTR-204ENST00000440088 CAVIN1Q6NZI2 390 aaKnown RBP22.7■■□□□ 1.23
APTR-204ENST00000440088 RASGRP2Q7LDG7 609 aa22.7■■□□□ 1.23
APTR-204ENST00000440088 SPZ1Q9BXG8 430 aa22.7■■□□□ 1.23
APTR-204ENST00000440088 FOXP1Q9H334 677 aaPredicted RBP22.7■■□□□ 1.23
APTR-204ENST00000440088 TBC1D12O60347 775 aa22.7■■□□□ 1.22
APTR-204ENST00000440088 SEPT2Q15019 361 aa22.7■■□□□ 1.22
APTR-204ENST00000440088 KIF4BQ2VIQ3 1234 aa22.7■■□□□ 1.22
APTR-204ENST00000440088 ASPRV1Q53RT3 343 aa22.7■■□□□ 1.22
APTR-204ENST00000440088 MKL1Q969V6 931 aa22.7■■□□□ 1.22
APTR-204ENST00000440088 BTBD18B2RXH4 712 aa22.69■■□□□ 1.22
APTR-204ENST00000440088 CYTH3O43739 400 aa22.69■■□□□ 1.22
APTR-204ENST00000440088 ICA1Q05084 483 aa22.69■■□□□ 1.22
APTR-204ENST00000440088 SHROOM1Q2M3G4 852 aaPredicted RBP22.69■■□□□ 1.22
APTR-204ENST00000440088 NOSTRINQ8IVI9 506 aa22.69■■□□□ 1.22
APTR-204ENST00000440088 PIBF1Q8WXW3 757 aa22.69■■□□□ 1.22
APTR-204ENST00000440088 PHF20Q9BVI0 1012 aa22.69■■□□□ 1.22
APTR-204ENST00000440088 RCOR1Q9UKL0 485 aa22.69■■□□□ 1.22
APTR-204ENST00000440088 EEF2P13639 858 aaKnown RBP22.69■■□□□ 1.22
APTR-204ENST00000440088 RASA3Q14644 834 aa22.69■■□□□ 1.22
APTR-204ENST00000440088 FTOQ9C0B1 505 aaKnown RBP eCLIP22.69■■□□□ 1.22
APTR-204ENST00000440088 RTEL1Q9NZ71 1219 aa22.69■■□□□ 1.22
APTR-204ENST00000440088 PGAP2Q9UHJ9 254 aa22.69■■□□□ 1.22
APTR-204ENST00000440088 GOLGA6L4A6NEF3 574 aa22.68■■□□□ 1.22
APTR-204ENST00000440088 GH2P01242 217 aa22.68■■□□□ 1.22
APTR-204ENST00000440088 YBX3P16989 372 aaKnown RBP eCLIP22.68■■□□□ 1.22
APTR-204ENST00000440088 POLR3EQ9NVU0 708 aa22.68■■□□□ 1.22
APTR-204ENST00000440088 SLC35G1Q2M3R5 365 aa22.67■■□□□ 1.22
APTR-204ENST00000440088 CDAN1Q8IWY9 1227 aa22.67■■□□□ 1.22
APTR-204ENST00000440088 SHISA4Q96DD7 197 aa22.67■■□□□ 1.22
APTR-204ENST00000440088 BRMS1Q9HCU9 246 aa22.67■■□□□ 1.22
APTR-204ENST00000440088 GPRC5DQ9NZD1 345 aa22.67■■□□□ 1.22
APTR-204ENST00000440088 RRP1BQ14684 758 aaKnown RBP22.67■■□□□ 1.22
APTR-204ENST00000440088 SH3GLB2Q9NR46 395 aa22.67■■□□□ 1.22
APTR-204ENST00000440088 HACL1Q9UJ83 578 aa22.67■■□□□ 1.22
APTR-204ENST00000440088 KRT2P35908 639 aa22.66■■□□□ 1.22
APTR-204ENST00000440088 ZNF543Q08ER8 600 aa22.66■■□□□ 1.22
APTR-204ENST00000440088 TPRNQ4KMQ1 711 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms