RNA–Protein interactions for RNA: ENST00000436280.5

GPN1-204, Transcript of GPN-loop GTPase 1, humanhuman

TSL 2

Gene GPN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-204ENST00000436280 HOXC10Q9NYD6 342 aa16.73■□□□□ 0.27
GPN1-204ENST00000436280 IGHDP01880 384 aa16.72■□□□□ 0.27
GPN1-204ENST00000436280 ELNP15502 786 aa16.72■□□□□ 0.27
GPN1-204ENST00000436280 ATP2B2Q01814 1243 aa16.72■□□□□ 0.27
GPN1-204ENST00000436280 COG2Q14746 738 aa16.72■□□□□ 0.27
GPN1-204ENST00000436280 CLEC10AQ8IUN9 316 aa16.72■□□□□ 0.27
GPN1-204ENST00000436280 NUDT12Q9BQG2 462 aa16.72■□□□□ 0.27
GPN1-204ENST00000436280 VCPKMTQ9H867 229 aa16.72■□□□□ 0.27
GPN1-204ENST00000436280 GOPCQ9HD26 462 aa16.72■□□□□ 0.27
GPN1-204ENST00000436280 GJD2Q9UKL4 321 aa16.72■□□□□ 0.27
GPN1-204ENST00000436280 SPDYE16A6NNV3 312 aaPredicted RBP16.71■□□□□ 0.27
GPN1-204ENST00000436280 WDR46O15213 610 aaKnown RBP16.71■□□□□ 0.27
GPN1-204ENST00000436280 INHAP05111 366 aa16.71■□□□□ 0.27
GPN1-204ENST00000436280 GJB1P08034 283 aa16.71■□□□□ 0.27
GPN1-204ENST00000436280 EEF2P13639 858 aaKnown RBP16.71■□□□□ 0.27
GPN1-204ENST00000436280 RASA1P20936 1047 aa16.71■□□□□ 0.27
GPN1-204ENST00000436280 NUCB1Q02818 461 aa16.71■□□□□ 0.27
GPN1-204ENST00000436280 PDE4BQ07343 736 aa16.71■□□□□ 0.27
GPN1-204ENST00000436280 Q3C1V9 767 aa16.71■□□□□ 0.27
GPN1-204ENST00000436280 SIAH1Q8IUQ4 282 aa16.71■□□□□ 0.27
GPN1-204ENST00000436280 ZNF444Q8N0Y2 327 aaPredicted RBP16.71■□□□□ 0.27
GPN1-204ENST00000436280 STK11IPQ8N1F8 1099 aa16.71■□□□□ 0.27
GPN1-204ENST00000436280 HELLSQ9NRZ9 838 aa16.71■□□□□ 0.27
GPN1-204ENST00000436280 TNRC18O15417 2968 aaPredicted RBP16.71■□□□□ 0.26
GPN1-204ENST00000436280 TRIM6-TRIM34B2RNG4 842 aa16.7■□□□□ 0.26
GPN1-204ENST00000436280 PEX10O60683 326 aa16.7■□□□□ 0.26
GPN1-204ENST00000436280 HMGCRP04035 888 aa16.7■□□□□ 0.26
GPN1-204ENST00000436280 XRCC5P13010 732 aaKnown RBP16.7■□□□□ 0.26
GPN1-204ENST00000436280 CAPN2P17655 700 aa16.7■□□□□ 0.26
GPN1-204ENST00000436280 GJA8P48165 433 aa16.7■□□□□ 0.26
GPN1-204ENST00000436280 GPR142Q7Z601 462 aa16.7■□□□□ 0.26
GPN1-204ENST00000436280 PLEKHH3Q7Z736 793 aa16.7■□□□□ 0.26
GPN1-204ENST00000436280 TRMT44Q8IYL2 757 aaKnown RBP16.7■□□□□ 0.26
GPN1-204ENST00000436280 SPICE1Q8N0Z3 855 aa16.7■□□□□ 0.26
GPN1-204ENST00000436280 MB21D1Q8N884 522 aa16.7■□□□□ 0.26
GPN1-204ENST00000436280 PORCNQ9H237 461 aa16.7■□□□□ 0.26
GPN1-204ENST00000436280 BRCA2P51587 3418 aa16.69■□□□□ 0.26
GPN1-204ENST00000436280 PARP14Q460N5 1801 aa16.69■□□□□ 0.26
GPN1-204ENST00000436280 CNMDO75829 334 aa16.69■□□□□ 0.26
GPN1-204ENST00000436280 FLOT1O75955 427 aa16.69■□□□□ 0.26
GPN1-204ENST00000436280 RGS2P41220 211 aa16.69■□□□□ 0.26
GPN1-204ENST00000436280 POTEEQ6S8J3 1075 aa16.69■□□□□ 0.26
GPN1-204ENST00000436280 UNC93B1Q9H1C4 597 aa16.69■□□□□ 0.26
GPN1-204ENST00000436280 OSBPL3Q9H4L5 887 aa16.69■□□□□ 0.26
GPN1-204ENST00000436280 RAD21O60216 631 aa16.68■□□□□ 0.26
GPN1-204ENST00000436280 CYP2B6P20813 491 aa16.68■□□□□ 0.26
GPN1-204ENST00000436280 DSG3P32926 999 aa16.68■□□□□ 0.26
GPN1-204ENST00000436280 PPARAQ07869 468 aa16.68■□□□□ 0.26
GPN1-204ENST00000436280 MCMDC2Q4G0Z9 681 aa16.68■□□□□ 0.26
GPN1-204ENST00000436280 KIAA1755Q5JYT7 1200 aa16.68■□□□□ 0.26
GPN1-204ENST00000436280 WDR78Q5VTH9 848 aa16.68■□□□□ 0.26
GPN1-204ENST00000436280 PRPF38BQ5VTL8 546 aaKnown RBP16.68■□□□□ 0.26
GPN1-204ENST00000436280 CCDC129Q6ZRS4 1044 aa16.68■□□□□ 0.26
GPN1-204ENST00000436280 U2AF1L4Q8WU68 220 aaKnown RBP16.68■□□□□ 0.26
GPN1-204ENST00000436280 RILPL2Q969X0 211 aa16.68■□□□□ 0.26
GPN1-204ENST00000436280 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.68■□□□□ 0.26
GPN1-204ENST00000436280 BTBD7Q9P203 1132 aa16.68■□□□□ 0.26
GPN1-204ENST00000436280 NYAP2Q9P242 653 aa16.68■□□□□ 0.26
GPN1-204ENST00000436280 IVNS1ABPQ9Y6Y0 642 aa16.68■□□□□ 0.26
GPN1-204ENST00000436280 PLXNB2O15031 1838 aa16.68■□□□□ 0.26
GPN1-204ENST00000436280 PRDM1O75626 825 aa16.67■□□□□ 0.26
GPN1-204ENST00000436280 TSPY3P0CV98 308 aa16.67■□□□□ 0.26
GPN1-204ENST00000436280 TSPY8P0CW00 308 aa16.67■□□□□ 0.26
GPN1-204ENST00000436280 MORN1Q5T089 497 aa16.67■□□□□ 0.26
GPN1-204ENST00000436280 PLEKHM2Q8IWE5 1019 aa16.67■□□□□ 0.26
GPN1-204ENST00000436280 APBA2Q99767 749 aa16.67■□□□□ 0.26
GPN1-204ENST00000436280 GREB1LQ9C091 1923 aaPredicted RBP16.66■□□□□ 0.26
GPN1-204ENST00000436280 SLC15A5A6NIM6 579 aa16.66■□□□□ 0.26
GPN1-204ENST00000436280 SGPL1O95470 568 aa16.66■□□□□ 0.26
GPN1-204ENST00000436280 ZKSCAN1P17029 563 aaPredicted RBP16.66■□□□□ 0.26
GPN1-204ENST00000436280 MFAP1P55081 439 aaKnown RBP16.66■□□□□ 0.26
GPN1-204ENST00000436280 MAP2K5Q13163 448 aa16.66■□□□□ 0.26
GPN1-204ENST00000436280 PPP4R3BQ5MIZ7 849 aa16.66■□□□□ 0.26
GPN1-204ENST00000436280 TRIB2Q92519 343 aa16.66■□□□□ 0.26
GPN1-204ENST00000436280 USP6NLQ92738 828 aa16.66■□□□□ 0.26
GPN1-204ENST00000436280 SHISA4Q96DD7 197 aa16.66■□□□□ 0.26
GPN1-204ENST00000436280 SPATC1LQ9H0A9 340 aa16.66■□□□□ 0.26
GPN1-204ENST00000436280 HMX1Q9NP08 348 aaPredicted RBP16.66■□□□□ 0.26
GPN1-204ENST00000436280 PAK6Q9NQU5 681 aaPredicted RBP16.66■□□□□ 0.26
GPN1-204ENST00000436280 SYNPO2Q9UMS6 1093 aa16.66■□□□□ 0.26
GPN1-204ENST00000436280 MYH4Q9Y623 1939 aa16.65■□□□□ 0.26
GPN1-204ENST00000436280 IGKV6D-41A0A0C4DH26 115 aa16.65■□□□□ 0.26
GPN1-204ENST00000436280 A0A0D9SFI3 127 aa16.65■□□□□ 0.26
GPN1-204ENST00000436280 TTLL1O95922 423 aa16.65■□□□□ 0.26
GPN1-204ENST00000436280 PTPREP23469 700 aa16.65■□□□□ 0.26
GPN1-204ENST00000436280 PLS1Q14651 629 aa16.65■□□□□ 0.26
GPN1-204ENST00000436280 SHCBP1Q8NEM2 672 aa16.65■□□□□ 0.26
GPN1-204ENST00000436280 ATG4CQ96DT6 458 aa16.65■□□□□ 0.26
GPN1-204ENST00000436280 FAM227BQ96M60 508 aa16.65■□□□□ 0.26
GPN1-204ENST00000436280 DEFB118Q96PH6 123 aa16.65■□□□□ 0.26
GPN1-204ENST00000436280 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.65■□□□□ 0.26
GPN1-204ENST00000436280 MTMR4Q9NYA4 1195 aa16.65■□□□□ 0.26
GPN1-204ENST00000436280 CLIP2Q9UDT6 1046 aa16.65■□□□□ 0.26
GPN1-204ENST00000436280 RPTORQ8N122 1335 aa16.65■□□□□ 0.26
GPN1-204ENST00000436280 RLFQ13129 1914 aa16.64■□□□□ 0.26
GPN1-204ENST00000436280 PLIN4Q96Q06 1357 aa16.64■□□□□ 0.26
GPN1-204ENST00000436280 F5H6K3 240 aa16.64■□□□□ 0.25
GPN1-204ENST00000436280 STRNO43815 780 aa16.64■□□□□ 0.25
GPN1-204ENST00000436280 TFRCP02786 760 aaKnown RBP16.64■□□□□ 0.25
GPN1-204ENST00000436280 TFAP4Q01664 338 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms