RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 TMX2Q9Y320 296 aa20.85■□□□□ 0.93
SLC6A1-202ENST00000425938 ADCY3O60266 1144 aa20.84■□□□□ 0.93
SLC6A1-202ENST00000425938 RASA1P20936 1047 aa20.84■□□□□ 0.93
SLC6A1-202ENST00000425938 ERVK-9P63128 1117 aa20.84■□□□□ 0.93
SLC6A1-202ENST00000425938 ERVK-24P63145 666 aa20.84■□□□□ 0.93
SLC6A1-202ENST00000425938 MTFR1Q15390 333 aa20.84■□□□□ 0.93
SLC6A1-202ENST00000425938 ZNF444Q8N0Y2 327 aaPredicted RBP20.84■□□□□ 0.93
SLC6A1-202ENST00000425938 PXYLP1Q8TE99 480 aa20.84■□□□□ 0.93
SLC6A1-202ENST00000425938 TANGO6Q9C0B7 1094 aa20.84■□□□□ 0.93
SLC6A1-202ENST00000425938 VCPKMTQ9H867 229 aa20.84■□□□□ 0.93
SLC6A1-202ENST00000425938 RABGAP1Q9Y3P9 1069 aa20.84■□□□□ 0.93
SLC6A1-202ENST00000425938 GREB1LQ9C091 1923 aaPredicted RBP20.84■□□□□ 0.93
SLC6A1-202ENST00000425938 EEF2P13639 858 aaKnown RBP20.83■□□□□ 0.93
SLC6A1-202ENST00000425938 CCNA1P78396 465 aa20.83■□□□□ 0.93
SLC6A1-202ENST00000425938 PDE4BQ07343 736 aa20.83■□□□□ 0.93
SLC6A1-202ENST00000425938 MCMDC2Q4G0Z9 681 aa20.83■□□□□ 0.93
SLC6A1-202ENST00000425938 SIAH1Q8IUQ4 282 aa20.83■□□□□ 0.93
SLC6A1-202ENST00000425938 MYH4Q9Y623 1939 aa20.82■□□□□ 0.92
SLC6A1-202ENST00000425938 PEX10O60683 326 aa20.82■□□□□ 0.92
SLC6A1-202ENST00000425938 CCL5P13501 91 aa20.82■□□□□ 0.92
SLC6A1-202ENST00000425938 MAPK4P31152 587 aa20.82■□□□□ 0.92
SLC6A1-202ENST00000425938 PPARAQ07869 468 aa20.82■□□□□ 0.92
SLC6A1-202ENST00000425938 COG2Q14746 738 aa20.82■□□□□ 0.92
SLC6A1-202ENST00000425938 LBX2Q6XYB7 198 aa20.82■□□□□ 0.92
SLC6A1-202ENST00000425938 NKX2-3Q8TAU0 364 aa20.82■□□□□ 0.92
SLC6A1-202ENST00000425938 FAM227BQ96M60 508 aa20.82■□□□□ 0.92
SLC6A1-202ENST00000425938 CWC22Q9HCG8 908 aaKnown RBP20.82■□□□□ 0.92
SLC6A1-202ENST00000425938 GOPCQ9HD26 462 aa20.82■□□□□ 0.92
SLC6A1-202ENST00000425938 HOXC10Q9NYD6 342 aa20.82■□□□□ 0.92
SLC6A1-202ENST00000425938 A0A0D9SFI3 127 aa20.81■□□□□ 0.92
SLC6A1-202ENST00000425938 SPDYE16A6NNV3 312 aaPredicted RBP20.81■□□□□ 0.92
SLC6A1-202ENST00000425938 PRDM1O75626 825 aa20.81■□□□□ 0.92
SLC6A1-202ENST00000425938 SPICE1Q8N0Z3 855 aa20.81■□□□□ 0.92
SLC6A1-202ENST00000425938 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.81■□□□□ 0.92
SLC6A1-202ENST00000425938 RNF208Q9H0X6 261 aa20.81■□□□□ 0.92
SLC6A1-202ENST00000425938 WDR46O15213 610 aaKnown RBP20.8■□□□□ 0.92
SLC6A1-202ENST00000425938 RAD21O60216 631 aa20.8■□□□□ 0.92
SLC6A1-202ENST00000425938 GJB1P08034 283 aa20.8■□□□□ 0.92
SLC6A1-202ENST00000425938 ELNP15502 786 aa20.8■□□□□ 0.92
SLC6A1-202ENST00000425938 NMIQ13287 307 aaPredicted RBP20.8■□□□□ 0.92
SLC6A1-202ENST00000425938 Q3C1V9 767 aa20.8■□□□□ 0.92
SLC6A1-202ENST00000425938 SOCS4Q8WXH5 440 aa20.8■□□□□ 0.92
SLC6A1-202ENST00000425938 RLFQ13129 1914 aa20.8■□□□□ 0.92
SLC6A1-202ENST00000425938 FLOT1O75955 427 aa20.79■□□□□ 0.92
SLC6A1-202ENST00000425938 SDSP20132 328 aa20.79■□□□□ 0.92
SLC6A1-202ENST00000425938 GJA8P48165 433 aa20.79■□□□□ 0.92
SLC6A1-202ENST00000425938 MFAP1P55081 439 aaKnown RBP20.79■□□□□ 0.92
SLC6A1-202ENST00000425938 KIAA1755Q5JYT7 1200 aa20.79■□□□□ 0.92
SLC6A1-202ENST00000425938 VPS53Q5VIR6 699 aa20.79■□□□□ 0.92
SLC6A1-202ENST00000425938 POTEEQ6S8J3 1075 aa20.79■□□□□ 0.92
SLC6A1-202ENST00000425938 NUDT12Q9BQG2 462 aa20.79■□□□□ 0.92
SLC6A1-202ENST00000425938 NYAP2Q9P242 653 aa20.79■□□□□ 0.92
SLC6A1-202ENST00000425938 GJD2Q9UKL4 321 aa20.79■□□□□ 0.92
SLC6A1-202ENST00000425938 PLXNB2O15031 1838 aa20.78■□□□□ 0.92
SLC6A1-202ENST00000425938 HIP1O00291 1037 aa20.78■□□□□ 0.92
SLC6A1-202ENST00000425938 FOXP2O15409 715 aa20.78■□□□□ 0.92
SLC6A1-202ENST00000425938 CNMDO75829 334 aa20.78■□□□□ 0.92
SLC6A1-202ENST00000425938 INHAP05111 366 aa20.78■□□□□ 0.92
SLC6A1-202ENST00000425938 TSPY3P0CV98 308 aa20.78■□□□□ 0.92
SLC6A1-202ENST00000425938 TSPY8P0CW00 308 aa20.78■□□□□ 0.92
SLC6A1-202ENST00000425938 ALX1Q15699 326 aa20.78■□□□□ 0.92
SLC6A1-202ENST00000425938 PLEKHH3Q7Z736 793 aa20.78■□□□□ 0.92
SLC6A1-202ENST00000425938 MB21D1Q8N884 522 aa20.78■□□□□ 0.92
SLC6A1-202ENST00000425938 PORCNQ9H237 461 aa20.78■□□□□ 0.92
SLC6A1-202ENST00000425938 DIAPH3Q9NSV4 1193 aa20.78■□□□□ 0.92
SLC6A1-202ENST00000425938 PARP14Q460N5 1801 aa20.78■□□□□ 0.92
SLC6A1-202ENST00000425938 CCDC171Q6TFL3 1326 aa20.78■□□□□ 0.92
SLC6A1-202ENST00000425938 WDR78Q5VTH9 848 aa20.77■□□□□ 0.92
SLC6A1-202ENST00000425938 GPR142Q7Z601 462 aa20.77■□□□□ 0.92
SLC6A1-202ENST00000425938 NEDD1Q8NHV4 660 aa20.77■□□□□ 0.92
SLC6A1-202ENST00000425938 SHISA4Q96DD7 197 aa20.77■□□□□ 0.92
SLC6A1-202ENST00000425938 UNC93B1Q9H1C4 597 aa20.77■□□□□ 0.92
SLC6A1-202ENST00000425938 BTBD7Q9P203 1132 aa20.77■□□□□ 0.92
SLC6A1-202ENST00000425938 PLIN4Q96Q06 1357 aa20.76■□□□□ 0.91
SLC6A1-202ENST00000425938 IGKV6D-41A0A0C4DH26 115 aa20.76■□□□□ 0.91
SLC6A1-202ENST00000425938 HSPD1P10809 573 aaKnown RBP20.76■□□□□ 0.91
SLC6A1-202ENST00000425938 DSG3P32926 999 aa20.76■□□□□ 0.91
SLC6A1-202ENST00000425938 TFAP4Q01664 338 aa20.76■□□□□ 0.91
SLC6A1-202ENST00000425938 SAMD1Q6SPF0 538 aaPredicted RBP20.76■□□□□ 0.91
SLC6A1-202ENST00000425938 CEP95Q96GE4 821 aa20.76■□□□□ 0.91
SLC6A1-202ENST00000425938 CLIP2Q9UDT6 1046 aa20.76■□□□□ 0.91
SLC6A1-202ENST00000425938 ANAPC4Q9UJX5 808 aa20.76■□□□□ 0.91
SLC6A1-202ENST00000425938 A0A0G2JMZ2 1700 aa20.75■□□□□ 0.91
SLC6A1-202ENST00000425938 TTLL1O95922 423 aa20.75■□□□□ 0.91
SLC6A1-202ENST00000425938 HMGCRP04035 888 aa20.75■□□□□ 0.91
SLC6A1-202ENST00000425938 CAPN2P17655 700 aa20.75■□□□□ 0.91
SLC6A1-202ENST00000425938 CYP2B6P20813 491 aa20.75■□□□□ 0.91
SLC6A1-202ENST00000425938 RGS2P41220 211 aa20.75■□□□□ 0.91
SLC6A1-202ENST00000425938 CTDSPL2Q05D32 466 aa20.75■□□□□ 0.91
SLC6A1-202ENST00000425938 FAM47AQ5JRC9 791 aa20.75■□□□□ 0.91
SLC6A1-202ENST00000425938 PPP4R3BQ5MIZ7 849 aa20.75■□□□□ 0.91
SLC6A1-202ENST00000425938 ZNF589Q86UQ0 364 aaPredicted RBP20.75■□□□□ 0.91
SLC6A1-202ENST00000425938 MTMR4Q9NYA4 1195 aa20.75■□□□□ 0.91
SLC6A1-202ENST00000425938 SYNPO2Q9UMS6 1093 aa20.75■□□□□ 0.91
SLC6A1-202ENST00000425938 IVNS1ABPQ9Y6Y0 642 aa20.75■□□□□ 0.91
SLC6A1-202ENST00000425938 COL11A1P12107 1806 aaPredicted RBP20.74■□□□□ 0.91
SLC6A1-202ENST00000425938 TSPY2A6NKD2 308 aa20.74■□□□□ 0.91
SLC6A1-202ENST00000425938 SGPL1O95470 568 aa20.74■□□□□ 0.91
SLC6A1-202ENST00000425938 FGAP02671 866 aa20.74■□□□□ 0.91
SLC6A1-202ENST00000425938 XRCC5P13010 732 aaKnown RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms