RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 SPZ1Q9BXG8 430 aa9.57□□□□□ -0.88
HDAC9-207ENST00000413509 GPRC5DQ9NZD1 345 aa9.57□□□□□ -0.88
HDAC9-207ENST00000413509 STX8Q9UNK0 236 aa9.57□□□□□ -0.88
HDAC9-207ENST00000413509 FAM196BA6NMK8 535 aa9.56□□□□□ -0.88
HDAC9-207ENST00000413509 TRAK2O60296 914 aa9.56□□□□□ -0.88
HDAC9-207ENST00000413509 PDHBP11177 359 aa9.56□□□□□ -0.88
HDAC9-207ENST00000413509 JAG1P78504 1218 aa9.56□□□□□ -0.88
HDAC9-207ENST00000413509 TNFAIP1Q13829 316 aa9.56□□□□□ -0.88
HDAC9-207ENST00000413509 PFKFB3Q16875 520 aaPredicted RBP9.56□□□□□ -0.88
HDAC9-207ENST00000413509 SHROOM1Q2M3G4 852 aaPredicted RBP9.56□□□□□ -0.88
HDAC9-207ENST00000413509 KLHL40Q2TBA0 621 aa9.56□□□□□ -0.88
HDAC9-207ENST00000413509 KIF4BQ2VIQ3 1234 aa9.56□□□□□ -0.88
HDAC9-207ENST00000413509 ASPRV1Q53RT3 343 aa9.56□□□□□ -0.88
HDAC9-207ENST00000413509 OTUD7BQ6GQQ9 843 aa9.56□□□□□ -0.88
HDAC9-207ENST00000413509 USP48Q86UV5 1035 aa9.56□□□□□ -0.88
HDAC9-207ENST00000413509 ZSCAN29Q8IWY8 852 aaPredicted RBP9.56□□□□□ -0.88
HDAC9-207ENST00000413509 CMTR1Q8N1G2 835 aaKnown RBP9.56□□□□□ -0.88
HDAC9-207ENST00000413509 STAG2Q8N3U4 1231 aa9.56□□□□□ -0.88
HDAC9-207ENST00000413509 TMEM39BQ9GZU3 492 aa9.56□□□□□ -0.88
HDAC9-207ENST00000413509 KANSL2Q9H9L4 492 aa9.56□□□□□ -0.88
HDAC9-207ENST00000413509 GJB4Q9NTQ9 266 aa9.56□□□□□ -0.88
HDAC9-207ENST00000413509 CNPY2Q9Y2B0 182 aa9.56□□□□□ -0.88
HDAC9-207ENST00000413509 GJA3Q9Y6H8 435 aa9.56□□□□□ -0.88
HDAC9-207ENST00000413509 ATAD5Q96QE3 1844 aa9.56□□□□□ -0.88
HDAC9-207ENST00000413509 ZC3H4Q9UPT8 1303 aaKnown RBP9.56□□□□□ -0.88
HDAC9-207ENST00000413509 KIF28PB7ZC32 967 aa9.55□□□□□ -0.88
HDAC9-207ENST00000413509 CYTH3O43739 400 aa9.55□□□□□ -0.88
HDAC9-207ENST00000413509 PRPF40AO75400 957 aaKnown RBP9.55□□□□□ -0.88
HDAC9-207ENST00000413509 MMP1P03956 469 aa9.55□□□□□ -0.88
HDAC9-207ENST00000413509 PARP1P09874 1014 aaKnown RBP9.55□□□□□ -0.88
HDAC9-207ENST00000413509 TNNI2P48788 182 aa9.55□□□□□ -0.88
HDAC9-207ENST00000413509 KRT85P78386 507 aa9.55□□□□□ -0.88
HDAC9-207ENST00000413509 GUCY1B3Q02153 619 aa9.55□□□□□ -0.88
HDAC9-207ENST00000413509 ZNF543Q08ER8 600 aa9.55□□□□□ -0.88
HDAC9-207ENST00000413509 RASA3Q14644 834 aa9.55□□□□□ -0.88
HDAC9-207ENST00000413509 NPY5RQ15761 445 aa9.55□□□□□ -0.88
HDAC9-207ENST00000413509 CSPP1Q1MSJ5 1256 aa9.55□□□□□ -0.88
HDAC9-207ENST00000413509 ABCB5Q2M3G0 1257 aa9.55□□□□□ -0.88
HDAC9-207ENST00000413509 SAMD7Q7Z3H4 446 aa9.55□□□□□ -0.88
HDAC9-207ENST00000413509 CLEC10AQ8IUN9 316 aa9.55□□□□□ -0.88
HDAC9-207ENST00000413509 CDAN1Q8IWY9 1227 aa9.55□□□□□ -0.88
HDAC9-207ENST00000413509 GMCL1P1Q8NEA9 526 aa9.55□□□□□ -0.88
HDAC9-207ENST00000413509 GPT2Q8TD30 523 aa9.55□□□□□ -0.88
HDAC9-207ENST00000413509 PHF20Q9BVI0 1012 aa9.55□□□□□ -0.88
HDAC9-207ENST00000413509 SCAND2PQ9GZW5 306 aaPredicted RBP9.55□□□□□ -0.88
HDAC9-207ENST00000413509 FOXP1Q9H334 677 aaPredicted RBP9.55□□□□□ -0.88
HDAC9-207ENST00000413509 VEZTQ9HBM0 779 aa9.55□□□□□ -0.88
HDAC9-207ENST00000413509 SH3GLB2Q9NR46 395 aa9.55□□□□□ -0.88
HDAC9-207ENST00000413509 GINM1Q9NU53 330 aa9.55□□□□□ -0.88
HDAC9-207ENST00000413509 V9GY48 417 aaPredicted RBP9.55□□□□□ -0.88
HDAC9-207ENST00000413509 PAPPA2Q9BXP8 1791 aa9.55□□□□□ -0.88
HDAC9-207ENST00000413509 ASTN2O75129 1339 aaPredicted RBP9.55□□□□□ -0.88
HDAC9-207ENST00000413509 PITPNM2Q9BZ72 1349 aa9.55□□□□□ -0.88
HDAC9-207ENST00000413509 USP17L5A8MUK1 530 aa9.54□□□□□ -0.88
HDAC9-207ENST00000413509 PHF20L1A8MW92 1017 aa9.54□□□□□ -0.88
HDAC9-207ENST00000413509 KLRF2D3W0D1 207 aa9.54□□□□□ -0.88
HDAC9-207ENST00000413509 H7C1D1 291 aa9.54□□□□□ -0.88
HDAC9-207ENST00000413509 MBD3O95983 291 aa9.54□□□□□ -0.88
HDAC9-207ENST00000413509 SCG2P13521 617 aa9.54□□□□□ -0.88
HDAC9-207ENST00000413509 EEF2P13639 858 aaKnown RBP9.54□□□□□ -0.88
HDAC9-207ENST00000413509 NASPP49321 788 aaPredicted RBP9.54□□□□□ -0.88
HDAC9-207ENST00000413509 FOSBP53539 338 aa9.54□□□□□ -0.88
HDAC9-207ENST00000413509 SEPT2Q15019 361 aa9.54□□□□□ -0.88
HDAC9-207ENST00000413509 TBC1D10BQ4KMP7 808 aaPredicted RBP9.54□□□□□ -0.88
HDAC9-207ENST00000413509 MYSM1Q5VVJ2 828 aa9.54□□□□□ -0.88
HDAC9-207ENST00000413509 FAM173BQ6P4H8 233 aa9.54□□□□□ -0.88
HDAC9-207ENST00000413509 RASGRP2Q7LDG7 609 aa9.54□□□□□ -0.88
HDAC9-207ENST00000413509 APOBEC3FQ8IUX4 373 aaKnown RBP9.54□□□□□ -0.88
HDAC9-207ENST00000413509 TRPM4Q8TD43 1214 aa9.54□□□□□ -0.88
HDAC9-207ENST00000413509 DCAF4Q8WV16 495 aa9.54□□□□□ -0.88
HDAC9-207ENST00000413509 LEO1Q8WVC0 666 aaPredicted RBP9.54□□□□□ -0.88
HDAC9-207ENST00000413509 TNFRSF25Q93038 417 aa9.54□□□□□ -0.88
HDAC9-207ENST00000413509 MTMR8Q96EF0 704 aa9.54□□□□□ -0.88
HDAC9-207ENST00000413509 GMCL1Q96IK5 515 aa9.54□□□□□ -0.88
HDAC9-207ENST00000413509 L3MBTL3Q96JM7 780 aaPredicted RBP9.54□□□□□ -0.88
HDAC9-207ENST00000413509 TRIM34Q9BYJ4 488 aa9.54□□□□□ -0.88
HDAC9-207ENST00000413509 RIOX1Q9H6W3 641 aa9.54□□□□□ -0.88
HDAC9-207ENST00000413509 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.54□□□□□ -0.88
HDAC9-207ENST00000413509 RTEL1Q9NZ71 1219 aa9.54□□□□□ -0.88
HDAC9-207ENST00000413509 CLIP2Q9UDT6 1046 aa9.54□□□□□ -0.88
HDAC9-207ENST00000413509 HACL1Q9UJ83 578 aa9.54□□□□□ -0.88
HDAC9-207ENST00000413509 RCOR1Q9UKL0 485 aa9.54□□□□□ -0.88
HDAC9-207ENST00000413509 MORC2Q9Y6X9 1032 aaPredicted RBP9.54□□□□□ -0.88
HDAC9-207ENST00000413509 DOCK1Q14185 1865 aa9.53□□□□□ -0.88
HDAC9-207ENST00000413509 DCAF8L1A6NGE4 600 aa9.53□□□□□ -0.88
HDAC9-207ENST00000413509 MPHOSPH10O00566 681 aaKnown RBP9.53□□□□□ -0.88
HDAC9-207ENST00000413509 GDF11O95390 407 aa9.53□□□□□ -0.88
HDAC9-207ENST00000413509 GH2P01242 217 aa9.53□□□□□ -0.88
HDAC9-207ENST00000413509 HIRAP54198 1017 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-207ENST00000413509 UBE2HP62256 183 aa9.53□□□□□ -0.88
HDAC9-207ENST00000413509 AKAP17AQ02040 695 aaKnown RBP9.53□□□□□ -0.88
HDAC9-207ENST00000413509 ICA1Q05084 483 aa9.53□□□□□ -0.88
HDAC9-207ENST00000413509 TRIM29Q14134 588 aa9.53□□□□□ -0.88
HDAC9-207ENST00000413509 FOXD4L6Q3SYB3 417 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-207ENST00000413509 GPATCH4Q5T3I0 446 aaKnown RBP9.53□□□□□ -0.88
HDAC9-207ENST00000413509 RBM26Q5T8P6 1007 aaKnown RBP9.53□□□□□ -0.88
HDAC9-207ENST00000413509 C9orf131Q5VYM1 1079 aa9.53□□□□□ -0.88
HDAC9-207ENST00000413509 USP17L2Q6R6M4 530 aa9.53□□□□□ -0.88
HDAC9-207ENST00000413509 FOXD4L3Q6VB84 417 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-207ENST00000413509 NOSTRINQ8IVI9 506 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms