RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 TMED8Q6PL24 325 aaPredicted RBP13.12□□□□□ -0.31
PDXDC1-202ENST00000396410 CERS3Q8IU89 383 aa13.12□□□□□ -0.31
PDXDC1-202ENST00000396410 EYA3Q99504 573 aa13.12□□□□□ -0.31
PDXDC1-202ENST00000396410 RMND1Q9NWS8 449 aa13.12□□□□□ -0.31
PDXDC1-202ENST00000396410 MPHOSPH10O00566 681 aaKnown RBP13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 RGL2O15211 777 aa13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 SLFN14P0C7P3 912 aa13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 PLCD1P51178 756 aa13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 PFKFB3Q16875 520 aaPredicted RBP13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 DGKHQ86XP1 1220 aa13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 TCP11L1Q9NUJ3 509 aa13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 CCZ1BP86790 482 aa13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 CCZ1P86791 482 aaPredicted RBP13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 PKN1Q16512 942 aa13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 RASGRP4Q8TDF6 673 aa13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 RRP36Q96EU6 259 aaKnown RBP13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 CTAGE1Q96RT6 745 aa13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 DNAI1Q9UI46 699 aa13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 SEPT12Q8IYM1 358 aa13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 CDK5RAP3Q96JB5 506 aa13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 PCMTD1Q96MG8 357 aaPredicted RBP13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 PLIN2Q99541 437 aa13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 MAGEC2Q9UBF1 373 aaPredicted RBP13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 CTNND2Q9UQB3 1225 aa13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 V9GYY5 206 aaPredicted RBP13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 SLIT2O94813 1529 aa13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 PLCH1Q4KWH8 1693 aa13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 TRAPPC10P48553 1259 aa13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 GOLGA8FQ08AF8 430 aa13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 GOLGA8DPQ0D2H9 430 aa13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 C12orf60Q5U649 245 aa13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 SLC44A5Q8NCS7 719 aa13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 GJD4Q96KN9 370 aaPredicted RBP13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 BAG1Q99933 345 aaPredicted RBP13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 C6orf50Q9HD87 102 aa13.11□□□□□ -0.31
PDXDC1-202ENST00000396410 URI1O94763 535 aaPredicted RBP13.1□□□□□ -0.31
PDXDC1-202ENST00000396410 GPSM2P81274 684 aa13.1□□□□□ -0.31
PDXDC1-202ENST00000396410 NCAPHQ15003 741 aa13.1□□□□□ -0.31
PDXDC1-202ENST00000396410 DPF2Q92785 391 aa13.1□□□□□ -0.31
PDXDC1-202ENST00000396410 PAGE5Q96GU1 130 aa13.1□□□□□ -0.31
PDXDC1-202ENST00000396410 ZC3H12CQ9C0D7 883 aaKnown RBP13.1□□□□□ -0.31
PDXDC1-202ENST00000396410 CNTNAP5Q8WYK1 1306 aa13.1□□□□□ -0.31
PDXDC1-202ENST00000396410 CASP1P29466 404 aa13.1□□□□□ -0.31
PDXDC1-202ENST00000396410 EVX2Q03828 476 aa13.1□□□□□ -0.31
PDXDC1-202ENST00000396410 ARMCX5Q6P1M9 558 aa13.1□□□□□ -0.31
PDXDC1-202ENST00000396410 ENOX1Q8TC92 643 aaKnown RBP13.1□□□□□ -0.31
PDXDC1-202ENST00000396410 PCDHA4Q9UN74 947 aa13.1□□□□□ -0.31
PDXDC1-202ENST00000396410 N4BP3O15049 544 aa13.1□□□□□ -0.31
PDXDC1-202ENST00000396410 RBM5P52756 815 aaKnown RBP eCLIP13.1□□□□□ -0.31
PDXDC1-202ENST00000396410 GTF2IP78347 998 aa13.1□□□□□ -0.31
PDXDC1-202ENST00000396410 SPECC1LQ69YQ0 1117 aa13.1□□□□□ -0.31
PDXDC1-202ENST00000396410 VSTM4Q8IW00 320 aa13.1□□□□□ -0.31
PDXDC1-202ENST00000396410 TMX1Q9H3N1 280 aa13.1□□□□□ -0.31
PDXDC1-202ENST00000396410 CD209Q9NNX6 404 aa13.1□□□□□ -0.31
PDXDC1-202ENST00000396410 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.1□□□□□ -0.31
PDXDC1-202ENST00000396410 PDS5AQ29RF7 1337 aaKnown RBP13.1□□□□□ -0.31
PDXDC1-202ENST00000396410 KLRF2D3W0D1 207 aa13.09□□□□□ -0.31
PDXDC1-202ENST00000396410 PRR5LQ6MZQ0 368 aa13.09□□□□□ -0.31
PDXDC1-202ENST00000396410 SMYD4Q8IYR2 804 aaPredicted RBP13.09□□□□□ -0.31
PDXDC1-202ENST00000396410 TBC1D22AQ8WUA7 517 aa13.09□□□□□ -0.31
PDXDC1-202ENST00000396410 SAMSN1Q9NSI8 373 aaKnown RBP13.09□□□□□ -0.31
PDXDC1-202ENST00000396410 TMEM232C9JQI7 657 aa13.09□□□□□ -0.31
PDXDC1-202ENST00000396410 INF2Q27J81 1249 aa13.09□□□□□ -0.31
PDXDC1-202ENST00000396410 LETM2Q2VYF4 491 aa13.09□□□□□ -0.31
PDXDC1-202ENST00000396410 PPP1R13BQ96KQ4 1090 aa13.09□□□□□ -0.31
PDXDC1-202ENST00000396410 MYO5AQ9Y4I1 1855 aaKnown RBP13.09□□□□□ -0.31
PDXDC1-202ENST00000396410 SLU7O95391 586 aaKnown RBP13.09□□□□□ -0.31
PDXDC1-202ENST00000396410 ERCC5P28715 1186 aaPredicted RBP13.09□□□□□ -0.31
PDXDC1-202ENST00000396410 GNA11P29992 359 aa13.09□□□□□ -0.31
PDXDC1-202ENST00000396410 ADKP55263 362 aaKnown RBP13.09□□□□□ -0.31
PDXDC1-202ENST00000396410 FOXP4Q8IVH2 680 aaPredicted RBP13.09□□□□□ -0.31
PDXDC1-202ENST00000396410 STAG2Q8N3U4 1231 aa13.09□□□□□ -0.31
PDXDC1-202ENST00000396410 GSDMAQ96QA5 445 aa13.09□□□□□ -0.31
PDXDC1-202ENST00000396410 LZTS2Q9BRK4 669 aa13.09□□□□□ -0.31
PDXDC1-202ENST00000396410 CGNQ9P2M7 1197 aaKnown RBP13.09□□□□□ -0.31
PDXDC1-202ENST00000396410 MAPK8IP1Q9UQF2 711 aa13.09□□□□□ -0.31
PDXDC1-202ENST00000396410 FAM237AA0A1B0GTK4 181 aa13.09□□□□□ -0.31
PDXDC1-202ENST00000396410 ZNF384Q8TF68 577 aa13.09□□□□□ -0.31
PDXDC1-202ENST00000396410 COL1A1P02452 1464 aaPredicted RBP13.08□□□□□ -0.31
PDXDC1-202ENST00000396410 PSDA5PKW4 1024 aaPredicted RBP13.08□□□□□ -0.32
PDXDC1-202ENST00000396410 EARS2Q5JPH6 523 aaKnown RBP13.08□□□□□ -0.32
PDXDC1-202ENST00000396410 TRPC5Q9UL62 973 aaPredicted RBP13.08□□□□□ -0.32
PDXDC1-202ENST00000396410 BBOX1O75936 387 aa13.08□□□□□ -0.32
PDXDC1-202ENST00000396410 TUBB4AP04350 444 aa13.08□□□□□ -0.32
PDXDC1-202ENST00000396410 CDC25AP30304 524 aa13.08□□□□□ -0.32
PDXDC1-202ENST00000396410 EIF6P56537 245 aaKnown RBP13.08□□□□□ -0.32
PDXDC1-202ENST00000396410 MORC3Q14149 939 aa13.08□□□□□ -0.32
PDXDC1-202ENST00000396410 CCDC96Q2M329 555 aa13.08□□□□□ -0.32
PDXDC1-202ENST00000396410 ZSCAN29Q8IWY8 852 aaPredicted RBP13.08□□□□□ -0.32
PDXDC1-202ENST00000396410 NID2Q14112 1375 aa13.08□□□□□ -0.32
PDXDC1-202ENST00000396410 ARHGAP6O43182 974 aa13.08□□□□□ -0.32
PDXDC1-202ENST00000396410 ACTN4O43707 911 aaKnown RBP13.08□□□□□ -0.32
PDXDC1-202ENST00000396410 ADRA2BP18089 450 aa13.08□□□□□ -0.32
PDXDC1-202ENST00000396410 GTF2F1P35269 517 aaKnown RBP eCLIP13.08□□□□□ -0.32
PDXDC1-202ENST00000396410 CCT6AP40227 531 aaKnown RBP13.08□□□□□ -0.32
PDXDC1-202ENST00000396410 CBX1P83916 185 aa13.08□□□□□ -0.32
PDXDC1-202ENST00000396410 SPATA1Q5VX52 437 aa13.08□□□□□ -0.32
PDXDC1-202ENST00000396410 NUP88Q99567 741 aaPredicted RBP13.08□□□□□ -0.32
PDXDC1-202ENST00000396410 AFF2P51816 1311 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms