RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 IFNL2Q8IZJ0 200 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 PROCA1Q8NCQ7 364 aaPredicted RBP9.43□□□□□ -0.9
NDE1-202ENST00000396355 C3orf20Q8ND61 904 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 ZSCAN16Q9H4T2 348 aaPredicted RBP9.43□□□□□ -0.9
NDE1-202ENST00000396355 CD2APQ9Y5K6 639 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 UTYO14607 1347 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 EME2A4GXA9 379 aaPredicted RBP9.43□□□□□ -0.9
NDE1-202ENST00000396355 CREB3O43889 395 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 HNRNPCP07910 306 aaKnown RBP eCLIP9.43□□□□□ -0.92e-6■■■■□ 20.4
NDE1-202ENST00000396355 HSPA6P17066 643 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 IFFO1Q0D2I5 559 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 NECTIN1Q15223 517 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 EPHA10Q5JZY3 1008 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 AKNAD1Q5T1N1 836 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 SWT1Q5T5J6 900 aaKnown RBP9.43□□□□□ -0.9
NDE1-202ENST00000396355 AACSQ86V21 672 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 GSPT2Q8IYD1 628 aaKnown RBP9.43□□□□□ -0.9
NDE1-202ENST00000396355 NLGN1Q8N2Q7 840 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 TMEM87AQ8NBN3 555 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 MPHOSPH8Q99549 860 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 GRM8O00222 908 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 CDKL5O76039 1030 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 CHGBP05060 677 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 YBX3P16989 372 aaKnown RBP eCLIP9.42□□□□□ -0.9
NDE1-202ENST00000396355 ADCY2Q08462 1091 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 MAEAQ7L5Y9 396 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 TMCO5AQ8N6Q1 288 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 CCDC26Q8TAB7 109 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 TBC1D22AQ8WUA7 517 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 BICD1Q96G01 975 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 EHD4Q9H223 541 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 MRC1P22897 1456 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 COL15A1P39059 1388 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 PALLDQ8WX93 1383 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 A0A0D9SFI3 127 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 CPLX1O14810 134 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 ALDH1L1O75891 902 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 PIP4K2AP48426 406 aaPredicted RBP9.42□□□□□ -0.9
NDE1-202ENST00000396355 NEXNQ0ZGT2 675 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 G3BP1Q13283 466 aaKnown RBP eCLIP9.42□□□□□ -0.9
NDE1-202ENST00000396355 FILIP1LQ4L180 1135 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 TBC1D1Q86TI0 1168 aaPredicted RBP9.42□□□□□ -0.9
NDE1-202ENST00000396355 TTC5Q8N0Z6 440 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 TRIML1Q8N9V2 468 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 SPATA17Q96L03 361 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 FAM210AQ96ND0 272 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 CCDC8Q9H0W5 538 aaPredicted RBP9.42□□□□□ -0.9
NDE1-202ENST00000396355 KDM4CQ9H3R0 1056 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 RNF181Q9P0P0 153 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 MEGF6O75095 1541 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 AFDNP55196 1824 aaKnown RBP9.42□□□□□ -0.9
NDE1-202ENST00000396355 SEPT7Q16181 437 aaKnown RBP9.42□□□□□ -0.9
NDE1-202ENST00000396355 ME3Q16798 604 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 CCDC38Q502W7 563 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 TTC6Q86TZ1 520 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 STAG1Q8WVM7 1258 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 KCNB2Q92953 911 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 EDC3Q96F86 508 aaKnown RBP9.42□□□□□ -0.9
NDE1-202ENST00000396355 NWD2Q9ULI1 1742 aa9.42□□□□□ -0.9
NDE1-202ENST00000396355 POLR3DP05423 398 aaPredicted RBP9.41□□□□□ -0.9
NDE1-202ENST00000396355 MCM3P25205 808 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 HSP90AB4PQ58FF6 505 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 C11orf57Q6ZUT1 292 aaPredicted RBP9.41□□□□□ -0.9
NDE1-202ENST00000396355 LRP10Q7Z4F1 713 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 GPIHBP1Q8IV16 184 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 TRIM42Q8IWZ5 723 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 NEUROD6Q96NK8 337 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 LBHD1Q9BQE6 289 aaPredicted RBP9.41□□□□□ -0.9
NDE1-202ENST00000396355 TSGA10Q9BZW7 698 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 ZSWIM6Q9HCJ5 1215 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 TLDC2A0PJX2 215 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 GNAT1P11488 350 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 SCNN1BP51168 640 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 NMIQ13287 307 aaPredicted RBP9.41□□□□□ -0.9
NDE1-202ENST00000396355 TAF11Q15544 211 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 CFAP58Q5T655 872 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 PARP9Q8IXQ6 854 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 LINS1Q8NG48 757 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 NSMCE1Q8WV22 266 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 RUFY2Q8WXA3 655 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 KAT14Q9H8E8 782 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 CLEC11AQ9Y240 323 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 ARFGEF2Q9Y6D5 1785 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 A0A1B0GVL5 298 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 TADA3O75528 432 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 DEUP1Q05D60 604 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 ZNF589Q86UQ0 364 aaPredicted RBP9.41□□□□□ -0.9
NDE1-202ENST00000396355 FBF1Q8TES7 1133 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 HAUS2Q9NVX0 235 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 MTMR6Q9Y217 621 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 COL18A1P39060 1754 aa9.41□□□□□ -0.9
NDE1-202ENST00000396355 ZNF202O95125 648 aa9.4□□□□□ -0.9
NDE1-202ENST00000396355 ZNF365Q70YC5 407 aa9.4□□□□□ -0.9
NDE1-202ENST00000396355 LMBR1Q8WVP7 490 aa9.4□□□□□ -0.9
NDE1-202ENST00000396355 ZKSCAN4Q969J2 545 aaPredicted RBP9.4□□□□□ -0.9
NDE1-202ENST00000396355 GBP5Q96PP8 586 aa9.4□□□□□ -0.9
NDE1-202ENST00000396355 NUP88Q99567 741 aaPredicted RBP9.4□□□□□ -0.9
NDE1-202ENST00000396355 IRX2Q9BZI1 471 aaPredicted RBP9.4□□□□□ -0.9
NDE1-202ENST00000396355 DDX21Q9NR30 783 aaKnown RBP eCLIP9.4□□□□□ -0.9
NDE1-202ENST00000396355 PPP2R2CQ9Y2T4 447 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms