RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 GJB4Q9NTQ9 266 aa13.75□□□□□ -0.21
GTF2A2-202ENST00000396060 POLR3EQ9NVU0 708 aa13.75□□□□□ -0.21
GTF2A2-202ENST00000396060 NYAP2Q9P242 653 aa13.75□□□□□ -0.21
GTF2A2-202ENST00000396060 PGAP2Q9UHJ9 254 aa13.75□□□□□ -0.21
GTF2A2-202ENST00000396060 SYNPO2Q9UMS6 1093 aa13.75□□□□□ -0.21
GTF2A2-202ENST00000396060 MYH6P13533 1939 aa13.75□□□□□ -0.21
GTF2A2-202ENST00000396060 CNTNAP1P78357 1384 aa13.75□□□□□ -0.21
GTF2A2-202ENST00000396060 KIF28PB7ZC32 967 aa13.75□□□□□ -0.21
GTF2A2-202ENST00000396060 UBE2Q2LH0YL09 131 aa13.75□□□□□ -0.21
GTF2A2-202ENST00000396060 WNT10BO00744 389 aa13.75□□□□□ -0.21
GTF2A2-202ENST00000396060 MYO1BO43795 1136 aa13.75□□□□□ -0.21
GTF2A2-202ENST00000396060 CERKLQ49MI3 558 aaPredicted RBP13.75□□□□□ -0.21
GTF2A2-202ENST00000396060 USP28Q96RU2 1077 aa13.75□□□□□ -0.21
GTF2A2-202ENST00000396060 PHF20Q9BVI0 1012 aa13.75□□□□□ -0.21
GTF2A2-202ENST00000396060 KANSL2Q9H9L4 492 aa13.75□□□□□ -0.21
GTF2A2-202ENST00000396060 YEATS4O95619 227 aa13.74□□□□□ -0.21
GTF2A2-202ENST00000396060 PARP1P09874 1014 aaKnown RBP13.74□□□□□ -0.21
GTF2A2-202ENST00000396060 SCG2P13521 617 aa13.74□□□□□ -0.21
GTF2A2-202ENST00000396060 FOSBP53539 338 aa13.74□□□□□ -0.21
GTF2A2-202ENST00000396060 ZNF445P59923 1031 aa13.74□□□□□ -0.21
GTF2A2-202ENST00000396060 RASSF7Q02833 373 aa13.74□□□□□ -0.21
GTF2A2-202ENST00000396060 TMEM179Q6ZVK1 233 aa13.74□□□□□ -0.21
GTF2A2-202ENST00000396060 ZSCAN29Q8IWY8 852 aaPredicted RBP13.74□□□□□ -0.21
GTF2A2-202ENST00000396060 STAG2Q8N3U4 1231 aa13.74□□□□□ -0.21
GTF2A2-202ENST00000396060 CCDC82Q8N4S0 544 aa13.74□□□□□ -0.21
GTF2A2-202ENST00000396060 SYAP1Q96A49 352 aaPredicted RBP13.74□□□□□ -0.21
GTF2A2-202ENST00000396060 MORC2Q9Y6X9 1032 aaPredicted RBP13.74□□□□□ -0.21
GTF2A2-202ENST00000396060 LMNB1P20700 586 aa13.73□□□□□ -0.21
GTF2A2-202ENST00000396060 SLC35G1Q2M3R5 365 aa13.73□□□□□ -0.21
GTF2A2-202ENST00000396060 ASPRV1Q53RT3 343 aa13.73□□□□□ -0.21
GTF2A2-202ENST00000396060 NOSTRINQ8IVI9 506 aa13.73□□□□□ -0.21
GTF2A2-202ENST00000396060 DIS3L2Q8IYB7 885 aaKnown RBP13.73□□□□□ -0.21
GTF2A2-202ENST00000396060 SHISA4Q96DD7 197 aa13.73□□□□□ -0.21
GTF2A2-202ENST00000396060 CSRNP1Q96S65 589 aa13.73□□□□□ -0.21
GTF2A2-202ENST00000396060 TRIM34Q9BYJ4 488 aa13.73□□□□□ -0.21
GTF2A2-202ENST00000396060 RIOX1Q9H6W3 641 aa13.73□□□□□ -0.21
GTF2A2-202ENST00000396060 DICER1Q9UPY3 1922 aaKnown RBP13.73□□□□□ -0.21
GTF2A2-202ENST00000396060 BAZ2BQ9UIF8 2168 aaKnown RBP13.72□□□□□ -0.21
GTF2A2-202ENST00000396060 FSD2A1L4K1 749 aa13.72□□□□□ -0.21
GTF2A2-202ENST00000396060 TCP10L2B9ZVM9 353 aa13.72□□□□□ -0.21
GTF2A2-202ENST00000396060 KLRF2D3W0D1 207 aa13.72□□□□□ -0.21
GTF2A2-202ENST00000396060 CYTH3O43739 400 aa13.72□□□□□ -0.21
GTF2A2-202ENST00000396060 PDHBP11177 359 aa13.72□□□□□ -0.21
GTF2A2-202ENST00000396060 GMPSP49915 693 aaPredicted RBP13.72□□□□□ -0.21
GTF2A2-202ENST00000396060 GALNT17Q6IS24 598 aa13.72□□□□□ -0.21
GTF2A2-202ENST00000396060 CAVIN1Q6NZI2 390 aaKnown RBP13.72□□□□□ -0.21
GTF2A2-202ENST00000396060 LINC00301Q8NCQ3 95 aa13.72□□□□□ -0.21
GTF2A2-202ENST00000396060 PGBD1Q96JS3 809 aa13.72□□□□□ -0.21
GTF2A2-202ENST00000396060 FHDC1Q9C0D6 1143 aaPredicted RBP13.72□□□□□ -0.21
GTF2A2-202ENST00000396060 TMEM63CQ9P1W3 806 aa13.72□□□□□ -0.21
GTF2A2-202ENST00000396060 CLIP2Q9UDT6 1046 aa13.72□□□□□ -0.21
GTF2A2-202ENST00000396060 CLRN2A0PK11 232 aa13.71□□□□□ -0.21
GTF2A2-202ENST00000396060 BTBD18B2RXH4 712 aa13.71□□□□□ -0.21
GTF2A2-202ENST00000396060 TNNI2P48788 182 aa13.71□□□□□ -0.21
GTF2A2-202ENST00000396060 SLC39A14Q15043 492 aa13.71□□□□□ -0.21
GTF2A2-202ENST00000396060 NPY5RQ15761 445 aa13.71□□□□□ -0.21
GTF2A2-202ENST00000396060 ABCB5Q2M3G0 1257 aa13.71□□□□□ -0.21
GTF2A2-202ENST00000396060 NBPF9Q3BBW0 867 aa13.71□□□□□ -0.21
GTF2A2-202ENST00000396060 ANO1Q5XXA6 986 aa13.71□□□□□ -0.21
GTF2A2-202ENST00000396060 SIAH1Q8IUQ4 282 aa13.71□□□□□ -0.21
GTF2A2-202ENST00000396060 KCNG4Q8TDN1 519 aa13.71□□□□□ -0.21
GTF2A2-202ENST00000396060 GZF1Q9H116 711 aaPredicted RBP13.71□□□□□ -0.21
GTF2A2-202ENST00000396060 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.71□□□□□ -0.21
GTF2A2-202ENST00000396060 CNOT7Q9UIV1 285 aaKnown RBP13.71□□□□□ -0.21
GTF2A2-202ENST00000396060 KCNJ14Q9UNX9 436 aa13.71□□□□□ -0.21
GTF2A2-202ENST00000396060 A0A1W2PQ27 194 aa13.71□□□□□ -0.22
GTF2A2-202ENST00000396060 A0A1W2PQ64 194 aa13.71□□□□□ -0.22
GTF2A2-202ENST00000396060 A0A1W2PQD8 194 aa13.71□□□□□ -0.22
GTF2A2-202ENST00000396060 USP17L5A8MUK1 530 aa13.71□□□□□ -0.22
GTF2A2-202ENST00000396060 hCG_1984214I3L0E3 225 aa13.71□□□□□ -0.22
GTF2A2-202ENST00000396060 LETM1O95202 739 aaPredicted RBP13.71□□□□□ -0.22
GTF2A2-202ENST00000396060 CALML3P27482 149 aa13.71□□□□□ -0.22
GTF2A2-202ENST00000396060 ZNF543Q08ER8 600 aa13.71□□□□□ -0.22
GTF2A2-202ENST00000396060 TNFAIP1Q13829 316 aa13.71□□□□□ -0.22
GTF2A2-202ENST00000396060 ZSCAN23Q3MJ62 389 aa13.71□□□□□ -0.22
GTF2A2-202ENST00000396060 RILPL1Q5EBL4 403 aa13.71□□□□□ -0.22
GTF2A2-202ENST00000396060 GPATCH4Q5T3I0 446 aaKnown RBP13.71□□□□□ -0.22
GTF2A2-202ENST00000396060 RBM26Q5T8P6 1007 aaKnown RBP13.71□□□□□ -0.22
GTF2A2-202ENST00000396060 ZNF713Q8N859 430 aaPredicted RBP13.71□□□□□ -0.22
GTF2A2-202ENST00000396060 TNFRSF25Q93038 417 aa13.71□□□□□ -0.22
GTF2A2-202ENST00000396060 SYT17Q9BSW7 474 aa13.71□□□□□ -0.22
GTF2A2-202ENST00000396060 PPP6R2O75170 966 aa13.7□□□□□ -0.22
GTF2A2-202ENST00000396060 KRT2P35908 639 aa13.7□□□□□ -0.22
GTF2A2-202ENST00000396060 GNL2Q13823 731 aaKnown RBP13.7□□□□□ -0.22
GTF2A2-202ENST00000396060 ADALQ6DHV7 355 aa13.7□□□□□ -0.22
GTF2A2-202ENST00000396060 USP17L2Q6R6M4 530 aa13.7□□□□□ -0.22
GTF2A2-202ENST00000396060 ARHGAP27Q6ZUM4 889 aa13.7□□□□□ -0.22
GTF2A2-202ENST00000396060 MICALL2Q8IY33 904 aa13.7□□□□□ -0.22
GTF2A2-202ENST00000396060 GPC2Q8N158 579 aa13.7□□□□□ -0.22
GTF2A2-202ENST00000396060 DAGLBQ8NCG7 672 aa13.7□□□□□ -0.22
GTF2A2-202ENST00000396060 GMCL1P1Q8NEA9 526 aa13.7□□□□□ -0.22
GTF2A2-202ENST00000396060 DCAF4Q8WV16 495 aa13.7□□□□□ -0.22
GTF2A2-202ENST00000396060 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.7□□□□□ -0.22
GTF2A2-202ENST00000396060 BRMS1Q9HCU9 246 aa13.7□□□□□ -0.22
GTF2A2-202ENST00000396060 CABP5Q9NP86 173 aa13.7□□□□□ -0.22
GTF2A2-202ENST00000396060 GINM1Q9NU53 330 aa13.7□□□□□ -0.22
GTF2A2-202ENST00000396060 VPS54Q9P1Q0 977 aa13.7□□□□□ -0.22
GTF2A2-202ENST00000396060 SBF1O95248 1867 aa13.69□□□□□ -0.22
GTF2A2-202ENST00000396060 GOLGA6L4A6NEF3 574 aa13.69□□□□□ -0.22
GTF2A2-202ENST00000396060 MPHOSPH10O00566 681 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms