RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 TOP1P11387 765 aaKnown RBP14.89□□□□□ -0.03
TRIM40-206ENST00000376724 ATP2B1P20020 1258 aa14.89□□□□□ -0.03
TRIM40-206ENST00000376724 SHMT1P34896 483 aa14.89□□□□□ -0.03
TRIM40-206ENST00000376724 KRT2P35908 639 aa14.89□□□□□ -0.03
TRIM40-206ENST00000376724 SLC39A14Q15043 492 aa14.89□□□□□ -0.03
TRIM40-206ENST00000376724 MAP3K11Q16584 847 aa14.89□□□□□ -0.03
TRIM40-206ENST00000376724 RSBN1LQ6PCB5 846 aaPredicted RBP14.89□□□□□ -0.03
TRIM40-206ENST00000376724 CABP5Q9NP86 173 aa14.89□□□□□ -0.03
TRIM40-206ENST00000376724 COL4A5P29400 1685 aa14.89□□□□□ -0.03
TRIM40-206ENST00000376724 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.88□□□□□ -0.03
TRIM40-206ENST00000376724 A0A1B0GVL5 298 aa14.88□□□□□ -0.03
TRIM40-206ENST00000376724 GNAQP50148 359 aa14.88□□□□□ -0.03
TRIM40-206ENST00000376724 PFKFB3Q16875 520 aaPredicted RBP14.88□□□□□ -0.03
TRIM40-206ENST00000376724 SOGA3Q5TF21 947 aa14.88□□□□□ -0.03
TRIM40-206ENST00000376724 USP17L2Q6R6M4 530 aa14.88□□□□□ -0.03
TRIM40-206ENST00000376724 NIM1KQ8IY84 436 aa14.88□□□□□ -0.03
TRIM40-206ENST00000376724 IDI2Q9BXS1 227 aa14.88□□□□□ -0.03
TRIM40-206ENST00000376724 CPVLQ9H3G5 476 aa14.88□□□□□ -0.03
TRIM40-206ENST00000376724 CLSTN2Q9H4D0 955 aa14.88□□□□□ -0.03
TRIM40-206ENST00000376724 MTMR4Q9NYA4 1195 aa14.88□□□□□ -0.03
TRIM40-206ENST00000376724 PSDA5PKW4 1024 aaPredicted RBP14.88□□□□□ -0.03
TRIM40-206ENST00000376724 KLRF2D3W0D1 207 aa14.88□□□□□ -0.03
TRIM40-206ENST00000376724 PARP1P09874 1014 aaKnown RBP14.88□□□□□ -0.03
TRIM40-206ENST00000376724 TOB1P50616 345 aaPredicted RBP14.88□□□□□ -0.03
TRIM40-206ENST00000376724 NLRP5P59047 1200 aa14.88□□□□□ -0.03
TRIM40-206ENST00000376724 LRRC47Q8N1G4 583 aaKnown RBP14.88□□□□□ -0.03
TRIM40-206ENST00000376724 MRPS27Q92552 414 aaKnown RBP14.88□□□□□ -0.03
TRIM40-206ENST00000376724 GPKOWQ92917 476 aaPredicted RBP eCLIP14.88□□□□□ -0.03
TRIM40-206ENST00000376724 TRIM34Q9BYJ4 488 aa14.88□□□□□ -0.03
TRIM40-206ENST00000376724 CLIP2Q9UDT6 1046 aa14.88□□□□□ -0.03
TRIM40-206ENST00000376724 KIF13BQ9NQT8 1826 aa14.88□□□□□ -0.03
TRIM40-206ENST00000376724 PALM3A6NDB9 673 aaPredicted RBP14.87□□□□□ -0.03
TRIM40-206ENST00000376724 FAM205CA6NFA0 338 aa14.87□□□□□ -0.03
TRIM40-206ENST00000376724 VIL1P09327 827 aaKnown RBP14.87□□□□□ -0.03
TRIM40-206ENST00000376724 ATP2B2Q01814 1243 aa14.87□□□□□ -0.03
TRIM40-206ENST00000376724 FAM160A1Q05DH4 1040 aa14.87□□□□□ -0.03
TRIM40-206ENST00000376724 SNW1Q13573 536 aaKnown RBP14.87□□□□□ -0.03
TRIM40-206ENST00000376724 PTPAQ15257 358 aa14.87□□□□□ -0.03
TRIM40-206ENST00000376724 SH3BP5LQ7L8J4 393 aa14.87□□□□□ -0.03
TRIM40-206ENST00000376724 ANP32BQ92688 251 aaKnown RBP14.87□□□□□ -0.03
TRIM40-206ENST00000376724 DHX36Q9H2U1 1008 aaKnown RBP14.87□□□□□ -0.03
TRIM40-206ENST00000376724 BRMS1Q9HCU9 246 aa14.87□□□□□ -0.03
TRIM40-206ENST00000376724 ZNRF3Q9ULT6 936 aa14.87□□□□□ -0.03
TRIM40-206ENST00000376724 MYO3BQ8WXR4 1341 aa14.87□□□□□ -0.03
TRIM40-206ENST00000376724 USP17L5A8MUK1 530 aa14.87□□□□□ -0.03
TRIM40-206ENST00000376724 CYTH3O43739 400 aa14.87□□□□□ -0.03
TRIM40-206ENST00000376724 SLC35G1Q2M3R5 365 aa14.87□□□□□ -0.03
TRIM40-206ENST00000376724 RILPL1Q5EBL4 403 aa14.87□□□□□ -0.03
TRIM40-206ENST00000376724 OGFOD1Q8N543 542 aa14.87□□□□□ -0.03
TRIM40-206ENST00000376724 DNAJC18Q9H819 358 aa14.87□□□□□ -0.03
TRIM40-206ENST00000376724 PI4KBQ9UBF8 816 aa14.87□□□□□ -0.03
TRIM40-206ENST00000376724 A0A1W2PQ27 194 aa14.86□□□□□ -0.03
TRIM40-206ENST00000376724 A0A1W2PQ64 194 aa14.86□□□□□ -0.03
TRIM40-206ENST00000376724 A0A1W2PQD8 194 aa14.86□□□□□ -0.03
TRIM40-206ENST00000376724 CLRN2A0PK11 232 aa14.86□□□□□ -0.03
TRIM40-206ENST00000376724 KINO60870 393 aaKnown RBP14.86□□□□□ -0.03
TRIM40-206ENST00000376724 NDUFA8P51970 172 aa14.86□□□□□ -0.03
TRIM40-206ENST00000376724 EARS2Q5JPH6 523 aaKnown RBP14.86□□□□□ -0.03
TRIM40-206ENST00000376724 AXDND1Q5T1B0 1012 aaPredicted RBP14.86□□□□□ -0.03
TRIM40-206ENST00000376724 ENGASEQ8NFI3 743 aa14.86□□□□□ -0.03
TRIM40-206ENST00000376724 FUCA2Q9BTY2 467 aa14.86□□□□□ -0.03
TRIM40-206ENST00000376724 EHD4Q9H223 541 aa14.86□□□□□ -0.03
TRIM40-206ENST00000376724 VAT1LQ9HCJ6 419 aa14.86□□□□□ -0.03
TRIM40-206ENST00000376724 HDAC9Q9UKV0 1011 aa14.86□□□□□ -0.03
TRIM40-206ENST00000376724 BCS1LQ9Y276 419 aa14.86□□□□□ -0.03
TRIM40-206ENST00000376724 PCDHB6Q9Y5E3 794 aa14.86□□□□□ -0.03
TRIM40-206ENST00000376724 MYH8P13535 1937 aa14.86□□□□□ -0.03
TRIM40-206ENST00000376724 PLIN4Q96Q06 1357 aa14.86□□□□□ -0.03
TRIM40-206ENST00000376724 FRMPD2Q68DX3 1309 aaPredicted RBP14.86□□□□□ -0.03
TRIM40-206ENST00000376724 TCP10L2B9ZVM9 353 aa14.85□□□□□ -0.03
TRIM40-206ENST00000376724 PPP6R2O75170 966 aa14.85□□□□□ -0.03
TRIM40-206ENST00000376724 TTLL1O95922 423 aa14.85□□□□□ -0.03
TRIM40-206ENST00000376724 CCDC192P0DO97 292 aa14.85□□□□□ -0.03
TRIM40-206ENST00000376724 DLGAP5Q15398 846 aa14.85□□□□□ -0.03
TRIM40-206ENST00000376724 NOM1Q5C9Z4 860 aaKnown RBP14.85□□□□□ -0.03
TRIM40-206ENST00000376724 HEATR3Q7Z4Q2 680 aa14.85□□□□□ -0.03
TRIM40-206ENST00000376724 JMYQ8N9B5 988 aa14.85□□□□□ -0.03
TRIM40-206ENST00000376724 CLIC6Q96NY7 704 aa14.85□□□□□ -0.03
TRIM40-206ENST00000376724 TAOK3Q9H2K8 898 aa14.85□□□□□ -0.03
TRIM40-206ENST00000376724 IGKV6D-41A0A0C4DH26 115 aa14.85□□□□□ -0.03
TRIM40-206ENST00000376724 NOVP48745 357 aa14.85□□□□□ -0.03
TRIM40-206ENST00000376724 NPY5RQ15761 445 aa14.85□□□□□ -0.03
TRIM40-206ENST00000376724 SHROOM1Q2M3G4 852 aaPredicted RBP14.85□□□□□ -0.03
TRIM40-206ENST00000376724 HOMER1Q86YM7 354 aa14.85□□□□□ -0.03
TRIM40-206ENST00000376724 PKNOX2Q96KN3 472 aa14.85□□□□□ -0.03
TRIM40-206ENST00000376724 LZTS2Q9BRK4 669 aa14.85□□□□□ -0.03
TRIM40-206ENST00000376724 UBA5Q9GZZ9 404 aa14.85□□□□□ -0.03
TRIM40-206ENST00000376724 VPS33BQ9H267 617 aa14.85□□□□□ -0.03
TRIM40-206ENST00000376724 SPDYE2BA6NHP3 402 aa14.84□□□□□ -0.03
TRIM40-206ENST00000376724 ADAMTS3O15072 1205 aa14.84□□□□□ -0.03
TRIM40-206ENST00000376724 SPDYE6P0CI01 402 aa14.84□□□□□ -0.03
TRIM40-206ENST00000376724 PDHBP11177 359 aa14.84□□□□□ -0.03
TRIM40-206ENST00000376724 CXCL9Q07325 125 aa14.84□□□□□ -0.03
TRIM40-206ENST00000376724 CERKLQ49MI3 558 aaPredicted RBP14.84□□□□□ -0.03
TRIM40-206ENST00000376724 FMR1NBQ8N0W7 255 aaPredicted RBP14.84□□□□□ -0.03
TRIM40-206ENST00000376724 GMLQ99445 158 aa14.84□□□□□ -0.03
TRIM40-206ENST00000376724 TMOD2Q9NZR1 351 aa14.84□□□□□ -0.03
TRIM40-206ENST00000376724 RAD21O60216 631 aa14.83□□□□□ -0.03
TRIM40-206ENST00000376724 CMA1P23946 247 aa14.83□□□□□ -0.03
TRIM40-206ENST00000376724 TYRO3Q06418 890 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms