RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 RXRAP19793 462 aa14.67□□□□□ -0.06
MSH5-204ENST00000375755 MAP3K12Q12852 859 aa14.67□□□□□ -0.06
MSH5-204ENST00000375755 SLC39A14Q15043 492 aa14.67□□□□□ -0.06
MSH5-204ENST00000375755 ZNF772Q68DY9 489 aaPredicted RBP14.67□□□□□ -0.06
MSH5-204ENST00000375755 SPECC1LQ69YQ0 1117 aa14.67□□□□□ -0.06
MSH5-204ENST00000375755 NYXQ9GZU5 481 aa14.67□□□□□ -0.06
MSH5-204ENST00000375755 MKRN1Q9UHC7 482 aaKnown RBP14.67□□□□□ -0.06
MSH5-204ENST00000375755 CDC23Q9UJX2 597 aa14.67□□□□□ -0.06
MSH5-204ENST00000375755 MYO1BO43795 1136 aa14.67□□□□□ -0.06
MSH5-204ENST00000375755 VSNL1P62760 191 aa14.67□□□□□ -0.06
MSH5-204ENST00000375755 KIF23Q02241 960 aaPredicted RBP14.67□□□□□ -0.06
MSH5-204ENST00000375755 KRT27Q7Z3Y8 459 aa14.67□□□□□ -0.06
MSH5-204ENST00000375755 CNNM3Q8NE01 707 aa14.67□□□□□ -0.06
MSH5-204ENST00000375755 CCDC102AQ96A19 550 aa14.67□□□□□ -0.06
MSH5-204ENST00000375755 SOWAHDA6NJG2 315 aa14.66□□□□□ -0.06
MSH5-204ENST00000375755 ERLIN1O75477 346 aa14.66□□□□□ -0.06
MSH5-204ENST00000375755 RHOXF2BP0C7M4 288 aa14.66□□□□□ -0.06
MSH5-204ENST00000375755 CASP8Q14790 479 aa14.66□□□□□ -0.06
MSH5-204ENST00000375755 SDR42E1Q8WUS8 393 aa14.66□□□□□ -0.06
MSH5-204ENST00000375755 RHOXF2Q9BQY4 288 aa14.66□□□□□ -0.06
MSH5-204ENST00000375755 PCDHA5Q9Y5H7 936 aa14.66□□□□□ -0.06
MSH5-204ENST00000375755 B4E1Z4 1266 aa14.66□□□□□ -0.06
MSH5-204ENST00000375755 POTEB2H3BUK9 544 aa14.66□□□□□ -0.06
MSH5-204ENST00000375755 ATP2B1P20020 1258 aa14.66□□□□□ -0.06
MSH5-204ENST00000375755 EVX2Q03828 476 aa14.66□□□□□ -0.06
MSH5-204ENST00000375755 TICAM2Q86XR7 235 aa14.66□□□□□ -0.06
MSH5-204ENST00000375755 IFNL3Q8IZI9 196 aa14.66□□□□□ -0.06
MSH5-204ENST00000375755 CEP112Q8N8E3 955 aa14.66□□□□□ -0.06
MSH5-204ENST00000375755 GPATCH11Q8N954 259 aa14.66□□□□□ -0.06
MSH5-204ENST00000375755 PPM1EQ8WY54 764 aa14.66□□□□□ -0.06
MSH5-204ENST00000375755 UBR3Q6ZT12 1888 aa14.66□□□□□ -0.06
MSH5-204ENST00000375755 ZNF804BA4D1E1 1349 aa14.65□□□□□ -0.06
MSH5-204ENST00000375755 GSG1L2A8MUP6 293 aa14.65□□□□□ -0.06
MSH5-204ENST00000375755 VPS37DQ86XT2 251 aa14.65□□□□□ -0.06
MSH5-204ENST00000375755 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.65□□□□□ -0.06
MSH5-204ENST00000375755 RAI14Q9P0K7 980 aa14.65□□□□□ -0.06
MSH5-204ENST00000375755 FOXN1O15353 648 aa14.65□□□□□ -0.06
MSH5-204ENST00000375755 CCDC175P0C221 793 aa14.65□□□□□ -0.06
MSH5-204ENST00000375755 GYS1P13807 737 aa14.65□□□□□ -0.06
MSH5-204ENST00000375755 CYP7A1P22680 504 aa14.65□□□□□ -0.06
MSH5-204ENST00000375755 DYNLL1P63167 89 aaKnown RBP14.65□□□□□ -0.06
MSH5-204ENST00000375755 LONRF3Q496Y0 759 aa14.65□□□□□ -0.06
MSH5-204ENST00000375755 EP400NLQ6ZTU2 488 aa14.65□□□□□ -0.06
MSH5-204ENST00000375755 FAM71BQ8TC56 605 aa14.65□□□□□ -0.06
MSH5-204ENST00000375755 CLIC6Q96NY7 704 aa14.65□□□□□ -0.06
MSH5-204ENST00000375755 NCAPGQ9BPX3 1015 aa14.65□□□□□ -0.06
MSH5-204ENST00000375755 PRR29P0C7W0 189 aa14.64□□□□□ -0.07
MSH5-204ENST00000375755 FMR1Q06787 632 aaKnown RBP eCLIP14.64□□□□□ -0.07
MSH5-204ENST00000375755 SART3Q15020 963 aaKnown RBP14.64□□□□□ -0.07
MSH5-204ENST00000375755 RAD9BQ6WBX8 426 aa14.64□□□□□ -0.07
MSH5-204ENST00000375755 HPS5Q9UPZ3 1129 aa14.64□□□□□ -0.07
MSH5-204ENST00000375755 ADGRG1Q9Y653 693 aa14.64□□□□□ -0.07
MSH5-204ENST00000375755 LRRIQ3A6PVS8 624 aaPredicted RBP14.64□□□□□ -0.07
MSH5-204ENST00000375755 UBE4AQ14139 1066 aa14.64□□□□□ -0.07
MSH5-204ENST00000375755 PRR5LQ6MZQ0 368 aa14.64□□□□□ -0.07
MSH5-204ENST00000375755 NCOA7Q8NI08 942 aa14.64□□□□□ -0.07
MSH5-204ENST00000375755 FAM204AQ9H8W3 233 aa14.64□□□□□ -0.07
MSH5-204ENST00000375755 SLC4A4Q9Y6R1 1079 aa14.64□□□□□ -0.07
MSH5-204ENST00000375755 MYH13Q9UKX3 1938 aa14.64□□□□□ -0.07
MSH5-204ENST00000375755 KLF18A0A0U1RQI7 1052 aa14.64□□□□□ -0.07
MSH5-204ENST00000375755 PATL2C9JE40 543 aaKnown RBP14.64□□□□□ -0.07
MSH5-204ENST00000375755 ZNF18P17022 549 aa14.64□□□□□ -0.07
MSH5-204ENST00000375755 HSP90B2PQ58FF3 399 aa14.64□□□□□ -0.07
MSH5-204ENST00000375755 NFE2L3Q9Y4A8 694 aa14.64□□□□□ -0.07
MSH5-204ENST00000375755 CYP2D7A0A087X1C5 515 aa14.63□□□□□ -0.07
MSH5-204ENST00000375755 ZNF569Q5MCW4 686 aa14.63□□□□□ -0.07
MSH5-204ENST00000375755 RALYLQ86SE5 291 aaKnown RBP14.63□□□□□ -0.07
MSH5-204ENST00000375755 TRMT44Q8IYL2 757 aaKnown RBP14.63□□□□□ -0.07
MSH5-204ENST00000375755 CNBD1Q8NA66 436 aa14.63□□□□□ -0.07
MSH5-204ENST00000375755 ZKSCAN3Q9BRR0 538 aa14.63□□□□□ -0.07
MSH5-204ENST00000375755 MYL10Q9BUA6 226 aa14.63□□□□□ -0.07
MSH5-204ENST00000375755 GOLGA8BA8MQT2 603 aa14.63□□□□□ -0.07
MSH5-204ENST00000375755 MYCNP04198 464 aaPredicted RBP14.63□□□□□ -0.07
MSH5-204ENST00000375755 PTPAQ15257 358 aa14.63□□□□□ -0.07
MSH5-204ENST00000375755 KIF4BQ2VIQ3 1234 aa14.63□□□□□ -0.07
MSH5-204ENST00000375755 AIFM3Q96NN9 605 aa14.63□□□□□ -0.07
MSH5-204ENST00000375755 MYCBPQ99417 103 aaPredicted RBP14.63□□□□□ -0.07
MSH5-204ENST00000375755 CACNA1SQ13698 1873 aa14.63□□□□□ -0.07
MSH5-204ENST00000375755 BAZ2AQ9UIF9 1905 aaKnown RBP14.63□□□□□ -0.07
MSH5-204ENST00000375755 KIF5CO60282 957 aa14.62□□□□□ -0.07
MSH5-204ENST00000375755 CHRM1P11229 460 aaPredicted RBP14.62□□□□□ -0.07
MSH5-204ENST00000375755 CAVIN4Q5BKX8 364 aa14.62□□□□□ -0.07
MSH5-204ENST00000375755 RESP18Q5W5W9 173 aa14.62□□□□□ -0.07
MSH5-204ENST00000375755 NAPBQ9H115 298 aa14.62□□□□□ -0.07
MSH5-204ENST00000375755 FAM237AA0A1B0GTK4 181 aa14.62□□□□□ -0.07
MSH5-204ENST00000375755 PPFIA4O75335 1185 aa14.62□□□□□ -0.07
MSH5-204ENST00000375755 E2F4Q16254 413 aa14.62□□□□□ -0.07
MSH5-204ENST00000375755 RRP12Q5JTH9 1297 aaKnown RBP14.62□□□□□ -0.07
MSH5-204ENST00000375755 CHD4Q14839 1912 aa14.62□□□□□ -0.07
MSH5-204ENST00000375755 UBE2Q2LH0YL09 131 aa14.62□□□□□ -0.07
MSH5-204ENST00000375755 CPP00450 1065 aa14.62□□□□□ -0.07
MSH5-204ENST00000375755 SLC4A8Q2Y0W8 1093 aa14.62□□□□□ -0.07
MSH5-204ENST00000375755 POTEAQ6S8J7 498 aa14.62□□□□□ -0.07
MSH5-204ENST00000375755 FBXO33Q7Z6M2 555 aa14.62□□□□□ -0.07
MSH5-204ENST00000375755 AKR1B15C9JRZ8 316 aaPredicted RBP14.61□□□□□ -0.07
MSH5-204ENST00000375755 PPP6R2O75170 966 aa14.61□□□□□ -0.07
MSH5-204ENST00000375755 PRDX5P30044 214 aa14.61□□□□□ -0.07
MSH5-204ENST00000375755 DDR1Q08345 913 aa14.61□□□□□ -0.07
MSH5-204ENST00000375755 ZNF827Q17R98 1081 aa14.61□□□□□ -0.07
MSH5-204ENST00000375755 SLC35F6Q8N357 371 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms