RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 FLRT1Q9NZU1 646 aa14.7□□□□□ -0.06
LSM2-208ENST00000375661 PRKAG2Q9UGJ0 569 aa14.7□□□□□ -0.06
LSM2-208ENST00000375661 STRNO43815 780 aa14.69□□□□□ -0.06
LSM2-208ENST00000375661 IGHA2P01877 340 aa14.69□□□□□ -0.06
LSM2-208ENST00000375661 RAB3GAP1Q15042 981 aa14.69□□□□□ -0.06
LSM2-208ENST00000375661 ZYXQ15942 572 aaKnown RBP14.69□□□□□ -0.06
LSM2-208ENST00000375661 ABCB5Q2M3G0 1257 aa14.69□□□□□ -0.06
LSM2-208ENST00000375661 WDR78Q5VTH9 848 aa14.69□□□□□ -0.06
LSM2-208ENST00000375661 OLFML2BQ68BL8 750 aa14.69□□□□□ -0.06
LSM2-208ENST00000375661 ZNFX1Q9P2E3 1918 aaKnown RBP14.68□□□□□ -0.06
LSM2-208ENST00000375661 SPDYE16A6NNV3 312 aaPredicted RBP14.68□□□□□ -0.06
LSM2-208ENST00000375661 IDH1O75874 414 aaKnown RBP14.68□□□□□ -0.06
LSM2-208ENST00000375661 CNGA1P29973 690 aa14.68□□□□□ -0.06
LSM2-208ENST00000375661 MAP3K12Q12852 859 aa14.68□□□□□ -0.06
LSM2-208ENST00000375661 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.68□□□□□ -0.06
LSM2-208ENST00000375661 ARRDC4Q8NCT1 418 aa14.68□□□□□ -0.06
LSM2-208ENST00000375661 BCL11AQ9H165 835 aa14.68□□□□□ -0.06
LSM2-208ENST00000375661 BTBD7Q9P203 1132 aa14.68□□□□□ -0.06
LSM2-208ENST00000375661 PARP14Q460N5 1801 aa14.68□□□□□ -0.06
LSM2-208ENST00000375661 IFIT2P09913 472 aaKnown RBP14.67□□□□□ -0.06
LSM2-208ENST00000375661 CYBAP13498 195 aa14.67□□□□□ -0.06
LSM2-208ENST00000375661 ZNF697Q5TEC3 545 aa14.67□□□□□ -0.06
LSM2-208ENST00000375661 ANKRD45Q5TZF3 282 aa14.67□□□□□ -0.06
LSM2-208ENST00000375661 B4GALNT3Q6L9W6 998 aa14.67□□□□□ -0.06
LSM2-208ENST00000375661 MAGEB6Q8N7X4 407 aa14.67□□□□□ -0.06
LSM2-208ENST00000375661 SHCBP1Q8NEM2 672 aa14.67□□□□□ -0.06
LSM2-208ENST00000375661 NPLOC4Q8TAT6 608 aa14.67□□□□□ -0.06
LSM2-208ENST00000375661 GUCD1Q96NT3 240 aa14.67□□□□□ -0.06
LSM2-208ENST00000375661 RPAP3Q9H6T3 665 aaPredicted RBP14.67□□□□□ -0.06
LSM2-208ENST00000375661 HOXC10Q9NYD6 342 aa14.67□□□□□ -0.06
LSM2-208ENST00000375661 CYP2C19P33261 490 aa14.66□□□□□ -0.06
LSM2-208ENST00000375661 SHMT1P34896 483 aa14.66□□□□□ -0.06
LSM2-208ENST00000375661 RTP1P59025 263 aa14.66□□□□□ -0.06
LSM2-208ENST00000375661 COG2Q14746 738 aa14.66□□□□□ -0.06
LSM2-208ENST00000375661 ERICH6BQ5W0A0 696 aa14.66□□□□□ -0.06
LSM2-208ENST00000375661 DPP9Q86TI2 863 aa14.66□□□□□ -0.06
LSM2-208ENST00000375661 MIGA1Q8NAN2 632 aa14.66□□□□□ -0.06
LSM2-208ENST00000375661 TRPV1Q8NER1 839 aa14.66□□□□□ -0.06
LSM2-208ENST00000375661 ACER1Q8TDN7 264 aa14.66□□□□□ -0.06
LSM2-208ENST00000375661 COL25A1Q9BXS0 654 aaPredicted RBP14.66□□□□□ -0.06
LSM2-208ENST00000375661 SLC5A4Q9NY91 659 aa14.66□□□□□ -0.06
LSM2-208ENST00000375661 NDUFB9Q9Y6M9 179 aa14.66□□□□□ -0.06
LSM2-208ENST00000375661 CUL9Q8IWT3 2517 aa14.66□□□□□ -0.06
LSM2-208ENST00000375661 KBTBD13C9JR72 458 aa14.65□□□□□ -0.06
LSM2-208ENST00000375661 SEPT4O43236 478 aa14.65□□□□□ -0.06
LSM2-208ENST00000375661 GUCY1A2P33402 732 aa14.65□□□□□ -0.06
LSM2-208ENST00000375661 ATN1P54259 1190 aaPredicted RBP14.65□□□□□ -0.06
LSM2-208ENST00000375661 NUCB1Q02818 461 aa14.65□□□□□ -0.06
LSM2-208ENST00000375661 GABPAQ06546 454 aa14.65□□□□□ -0.06
LSM2-208ENST00000375661 SNX17Q15036 470 aa14.65□□□□□ -0.06
LSM2-208ENST00000375661 SLC39A5Q6ZMH5 540 aa14.65□□□□□ -0.06
LSM2-208ENST00000375661 ABRAQ8N0Z2 381 aa14.65□□□□□ -0.06
LSM2-208ENST00000375661 MB21D1Q8N884 522 aa14.65□□□□□ -0.06
LSM2-208ENST00000375661 OTUD7AQ8TE49 926 aaPredicted RBP14.65□□□□□ -0.06
LSM2-208ENST00000375661 PLXNA1Q9UIW2 1896 aa14.64□□□□□ -0.07
LSM2-208ENST00000375661 ADORA2AP29274 412 aa14.64□□□□□ -0.07
LSM2-208ENST00000375661 PLCD1P51178 756 aa14.64□□□□□ -0.07
LSM2-208ENST00000375661 TTF1Q15361 905 aaPredicted RBP14.64□□□□□ -0.07
LSM2-208ENST00000375661 C1orf53Q5VUE5 145 aa14.64□□□□□ -0.07
LSM2-208ENST00000375661 RIOK1Q9BRS2 568 aaKnown RBP14.64□□□□□ -0.07
LSM2-208ENST00000375661 MOV10L1Q9BXT6 1211 aaKnown RBP14.64□□□□□ -0.07
LSM2-208ENST00000375661 LNPKQ9C0E8 428 aa14.64□□□□□ -0.07
LSM2-208ENST00000375661 SALL3Q9BXA9 1300 aa14.64□□□□□ -0.07
LSM2-208ENST00000375661 POLR3DP05423 398 aaPredicted RBP14.63□□□□□ -0.07
LSM2-208ENST00000375661 SEPT2Q15019 361 aa14.63□□□□□ -0.07
LSM2-208ENST00000375661 GJC2Q5T442 439 aaPredicted RBP14.63□□□□□ -0.07
LSM2-208ENST00000375661 CHD1LQ86WJ1 897 aa14.63□□□□□ -0.07
LSM2-208ENST00000375661 SPATC1LQ9H0A9 340 aa14.63□□□□□ -0.07
LSM2-208ENST00000375661 MROH8Q9H579 483 aa14.63□□□□□ -0.07
LSM2-208ENST00000375661 ATP11BQ9Y2G3 1177 aa14.63□□□□□ -0.07
LSM2-208ENST00000375661 COL11A1P12107 1806 aaPredicted RBP14.63□□□□□ -0.07
LSM2-208ENST00000375661 A0A0C4DFX4 3053 aa14.63□□□□□ -0.07
LSM2-208ENST00000375661 DNAH12Q6ZR08 3092 aa14.62□□□□□ -0.07
LSM2-208ENST00000375661 MAGEB6P1A0A0J9YX57 407 aa14.62□□□□□ -0.07
LSM2-208ENST00000375661 SMCHD1A6NHR9 2005 aa14.62□□□□□ -0.07
LSM2-208ENST00000375661 ERCC3P19447 782 aa14.62□□□□□ -0.07
LSM2-208ENST00000375661 SMAD3P84022 425 aaKnown RBP14.62□□□□□ -0.07
LSM2-208ENST00000375661 TMEM179Q6ZVK1 233 aa14.62□□□□□ -0.07
LSM2-208ENST00000375661 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.62□□□□□ -0.07
LSM2-208ENST00000375661 CRNKL1Q9BZJ0 848 aaKnown RBP14.62□□□□□ -0.07
LSM2-208ENST00000375661 TANGO6Q9C0B7 1094 aa14.62□□□□□ -0.07
LSM2-208ENST00000375661 ANTXR1Q9H6X2 564 aa14.62□□□□□ -0.07
LSM2-208ENST00000375661 SWAP70Q9UH65 585 aa14.62□□□□□ -0.07
LSM2-208ENST00000375661 NRBP1Q9UHY1 535 aa14.62□□□□□ -0.07
LSM2-208ENST00000375661 A0A1W2PRG0 241 aa14.61□□□□□ -0.07
LSM2-208ENST00000375661 ATP5JP18859 108 aa14.61□□□□□ -0.07
LSM2-208ENST00000375661 DSG3P32926 999 aa14.61□□□□□ -0.07
LSM2-208ENST00000375661 SHHQ15465 462 aa14.61□□□□□ -0.07
LSM2-208ENST00000375661 TSHZ3Q63HK5 1081 aa14.61□□□□□ -0.07
LSM2-208ENST00000375661 CCDC136Q96JN2 1154 aa14.61□□□□□ -0.07
LSM2-208ENST00000375661 FAM161BQ96MY7 647 aa14.61□□□□□ -0.07
LSM2-208ENST00000375661 SH2D4AQ9H788 454 aa14.61□□□□□ -0.07
LSM2-208ENST00000375661 ECHDC1Q9NTX5 307 aa14.61□□□□□ -0.07
LSM2-208ENST00000375661 MCM9Q9NXL9 1143 aa14.61□□□□□ -0.07
LSM2-208ENST00000375661 PPP4R2Q9NY27 417 aa14.61□□□□□ -0.07
LSM2-208ENST00000375661 ZBTB47Q9UFB7 747 aaPredicted RBP14.61□□□□□ -0.07
LSM2-208ENST00000375661 BAZ2AQ9UIF9 1905 aaKnown RBP14.6□□□□□ -0.07
LSM2-208ENST00000375661 TMEM265A0A087WTH1 108 aa14.6□□□□□ -0.07
LSM2-208ENST00000375661 MPHOSPH10O00566 681 aaKnown RBP14.6□□□□□ -0.07
LSM2-208ENST00000375661 COBLO75128 1261 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms