RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 LRRC4BQ9NT99 713 aa14.97□□□□□ -0.01
NCDN-203ENST00000373253 PARP3Q9Y6F1 533 aa14.97□□□□□ -0.01
NCDN-203ENST00000373253 TECP42680 631 aa14.97□□□□□ -0.01
NCDN-203ENST00000373253 CCDC47Q96A33 483 aaKnown RBP14.97□□□□□ -0.01
NCDN-203ENST00000373253 TAB2Q9NYJ8 693 aa14.97□□□□□ -0.01
NCDN-203ENST00000373253 MAGEC2Q9UBF1 373 aaPredicted RBP14.97□□□□□ -0.01
NCDN-203ENST00000373253 ARPP21Q9UBL0 812 aaPredicted RBP14.97□□□□□ -0.01
NCDN-203ENST00000373253 SMCO2A6NFE2 343 aa14.97□□□□□ -0.01
NCDN-203ENST00000373253 METTL16Q86W50 562 aaKnown RBP14.97□□□□□ -0.01
NCDN-203ENST00000373253 KRT27Q7Z3Y8 459 aa14.96□□□□□ -0.01
NCDN-203ENST00000373253 GJA10Q969M2 543 aa14.96□□□□□ -0.01
NCDN-203ENST00000373253 ATP8A2Q9NTI2 1148 aa14.96□□□□□ -0.01
NCDN-203ENST00000373253 RBM28Q9NW13 759 aaKnown RBP14.96□□□□□ -0.01
NCDN-203ENST00000373253 VPS72Q15906 364 aa14.96□□□□□ -0.01
NCDN-203ENST00000373253 BLIDQ8IZY5 108 aa14.96□□□□□ -0.01
NCDN-203ENST00000373253 PIGSQ96S52 555 aa14.96□□□□□ -0.01
NCDN-203ENST00000373253 TOB1P50616 345 aaPredicted RBP14.96□□□□□ -0.02
NCDN-203ENST00000373253 IQUBQ8NA54 791 aa14.96□□□□□ -0.02
NCDN-203ENST00000373253 RRP36Q96EU6 259 aaKnown RBP14.96□□□□□ -0.02
NCDN-203ENST00000373253 RNF26Q9BY78 433 aaPredicted RBP14.96□□□□□ -0.02
NCDN-203ENST00000373253 TRPC5Q9UL62 973 aaPredicted RBP14.96□□□□□ -0.02
NCDN-203ENST00000373253 MARF1Q9Y4F3 1742 aaKnown RBP14.96□□□□□ -0.02
NCDN-203ENST00000373253 ALX1Q15699 326 aa14.95□□□□□ -0.02
NCDN-203ENST00000373253 TEX35Q5T0J7 233 aa14.95□□□□□ -0.02
NCDN-203ENST00000373253 IL17RAQ96F46 866 aa14.95□□□□□ -0.02
NCDN-203ENST00000373253 PKD2L1Q9P0L9 805 aa14.95□□□□□ -0.02
NCDN-203ENST00000373253 MAN1B1Q9UKM7 699 aa14.95□□□□□ -0.02
NCDN-203ENST00000373253 ZNF76P36508 570 aa14.95□□□□□ -0.02
NCDN-203ENST00000373253 GSDMDP57764 484 aa14.95□□□□□ -0.02
NCDN-203ENST00000373253 FCHSD1Q86WN1 690 aa14.95□□□□□ -0.02
NCDN-203ENST00000373253 MAP7D2Q96T17 732 aa14.95□□□□□ -0.02
NCDN-203ENST00000373253 GDF11O95390 407 aa14.95□□□□□ -0.02
NCDN-203ENST00000373253 FBXO33Q7Z6M2 555 aa14.95□□□□□ -0.02
NCDN-203ENST00000373253 CLRN2A0PK11 232 aa14.94□□□□□ -0.02
NCDN-203ENST00000373253 WNT7AO00755 349 aa14.94□□□□□ -0.02
NCDN-203ENST00000373253 CDK8P49336 464 aa14.94□□□□□ -0.02
NCDN-203ENST00000373253 ARHGAP29Q52LW3 1261 aa14.94□□□□□ -0.02
NCDN-203ENST00000373253 TMTC3Q6ZXV5 915 aa14.94□□□□□ -0.02
NCDN-203ENST00000373253 BBXQ8WY36 941 aaPredicted RBP14.94□□□□□ -0.02
NCDN-203ENST00000373253 TMEM47Q9BQJ4 181 aa14.94□□□□□ -0.02
NCDN-203ENST00000373253 KCPQ6ZWJ8 1503 aa14.94□□□□□ -0.02
NCDN-203ENST00000373253 SALL1Q9NSC2 1324 aa14.94□□□□□ -0.02
NCDN-203ENST00000373253 HLA-DOAP06340 250 aa14.94□□□□□ -0.02
NCDN-203ENST00000373253 U2AF2P26368 475 aaKnown RBP eCLIP14.94□□□□□ -0.027e-6■■□□□ 14.4
NCDN-203ENST00000373253 MTIF2P46199 727 aaKnown RBP14.94□□□□□ -0.02
NCDN-203ENST00000373253 BARGINQ6ZT62 677 aa14.94□□□□□ -0.02
NCDN-203ENST00000373253 CEP95Q96GE4 821 aa14.94□□□□□ -0.02
NCDN-203ENST00000373253 FOXP1Q9H334 677 aaPredicted RBP14.94□□□□□ -0.02
NCDN-203ENST00000373253 EP400Q96L91 3159 aa14.93□□□□□ -0.02
NCDN-203ENST00000373253 IPO7O95373 1038 aaKnown RBP14.93□□□□□ -0.02
NCDN-203ENST00000373253 CHRNA5P30532 468 aa14.93□□□□□ -0.02
NCDN-203ENST00000373253 TXNRD1Q16881 649 aa14.93□□□□□ -0.02
NCDN-203ENST00000373253 SKIDA1Q1XH10 827 aa14.93□□□□□ -0.02
NCDN-203ENST00000373253 FOXP4Q8IVH2 680 aaPredicted RBP14.93□□□□□ -0.02
NCDN-203ENST00000373253 HINFPQ9BQA5 517 aa14.93□□□□□ -0.02
NCDN-203ENST00000373253 PNPLA7Q6ZV29 1317 aa14.93□□□□□ -0.02
NCDN-203ENST00000373253 USP17L5A8MUK1 530 aa14.93□□□□□ -0.02
NCDN-203ENST00000373253 CALML3P27482 149 aa14.93□□□□□ -0.02
NCDN-203ENST00000373253 CACNB1Q02641 598 aaPredicted RBP14.93□□□□□ -0.02
NCDN-203ENST00000373253 STIM1Q13586 685 aa14.93□□□□□ -0.02
NCDN-203ENST00000373253 UBE2SQ16763 222 aa14.93□□□□□ -0.02
NCDN-203ENST00000373253 ZNF512BQ96KM6 892 aaPredicted RBP14.93□□□□□ -0.02
NCDN-203ENST00000373253 DRC1Q96MC2 740 aa14.93□□□□□ -0.02
NCDN-203ENST00000373253 TMEM260Q9NX78 707 aa14.93□□□□□ -0.02
NCDN-203ENST00000373253 GDAQ9Y2T3 454 aa14.93□□□□□ -0.02
NCDN-203ENST00000373253 SCN11AQ9UI33 1791 aa14.93□□□□□ -0.02
NCDN-203ENST00000373253 DYNC1I1O14576 645 aa14.93□□□□□ -0.02
NCDN-203ENST00000373253 PPP6R2O75170 966 aa14.93□□□□□ -0.02
NCDN-203ENST00000373253 TROAPQ12815 778 aa14.93□□□□□ -0.02
NCDN-203ENST00000373253 SLF2Q8IX21 1173 aa14.93□□□□□ -0.02
NCDN-203ENST00000373253 IGSF22Q8N9C0 903 aa14.93□□□□□ -0.02
NCDN-203ENST00000373253 ZNF384Q8TF68 577 aa14.93□□□□□ -0.02
NCDN-203ENST00000373253 BRIP1Q9BX63 1249 aa14.93□□□□□ -0.02
NCDN-203ENST00000373253 KCNQ5Q9NR82 932 aa14.93□□□□□ -0.02
NCDN-203ENST00000373253 PPEF1O14829 653 aaPredicted RBP14.92□□□□□ -0.02
NCDN-203ENST00000373253 PTPREP23469 700 aa14.92□□□□□ -0.02
NCDN-203ENST00000373253 FMR1Q06787 632 aaKnown RBP eCLIP14.92□□□□□ -0.02
NCDN-203ENST00000373253 RESP18Q5W5W9 173 aa14.92□□□□□ -0.02
NCDN-203ENST00000373253 PLA2G4DQ86XP0 818 aa14.92□□□□□ -0.02
NCDN-203ENST00000373253 CCDC12Q8WUD4 166 aaPredicted RBP14.92□□□□□ -0.02
NCDN-203ENST00000373253 HPS3Q969F9 1004 aa14.92□□□□□ -0.02
NCDN-203ENST00000373253 C6orf50Q9HD87 102 aa14.92□□□□□ -0.02
NCDN-203ENST00000373253 ARID5AQ03989 594 aa14.92□□□□□ -0.02
NCDN-203ENST00000373253 UBXN1Q04323 297 aa14.92□□□□□ -0.02
NCDN-203ENST00000373253 FNBP4Q8N3X1 1017 aaPredicted RBP14.92□□□□□ -0.02
NCDN-203ENST00000373253 ZNF215Q9UL58 517 aaPredicted RBP14.92□□□□□ -0.02
NCDN-203ENST00000373253 LEMD3Q9Y2U8 911 aa14.92□□□□□ -0.02
NCDN-203ENST00000373253 SYNRGQ9UMZ2 1314 aa14.92□□□□□ -0.02
NCDN-203ENST00000373253 MYRIPQ8NFW9 859 aa14.91□□□□□ -0.02
NCDN-203ENST00000373253 PRIMPOLQ96LW4 560 aa14.91□□□□□ -0.02
NCDN-203ENST00000373253 MMRN2Q9H8L6 949 aa14.91□□□□□ -0.02
NCDN-203ENST00000373253 POLLQ9UGP5 575 aa14.91□□□□□ -0.02
NCDN-203ENST00000373253 UTRNP46939 3433 aa14.91□□□□□ -0.02
NCDN-203ENST00000373253 TRPM3Q9HCF6 1732 aaPredicted RBP14.91□□□□□ -0.02
NCDN-203ENST00000373253 TCP10L2B9ZVM9 353 aa14.91□□□□□ -0.02
NCDN-203ENST00000373253 GNAQP50148 359 aa14.91□□□□□ -0.02
NCDN-203ENST00000373253 CUL4BQ13620 913 aa14.91□□□□□ -0.02
NCDN-203ENST00000373253 PTPAQ15257 358 aa14.91□□□□□ -0.02
NCDN-203ENST00000373253 KANK3Q6NY19 840 aa14.91□□□□□ -0.02
NCDN-203ENST00000373253 CCDC148Q8NFR7 591 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms