RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 TOB2Q14106 344 aaPredicted RBP11.32□□□□□ -0.6
KDM4A-201ENST00000372396 APOA5Q6Q788 366 aa11.32□□□□□ -0.6
KDM4A-201ENST00000372396 SUGP1Q8IWZ8 645 aaKnown RBP11.32□□□□□ -0.6
KDM4A-201ENST00000372396 FANCBQ8NB91 859 aa11.32□□□□□ -0.6
KDM4A-201ENST00000372396 JDP2Q8WYK2 163 aa11.32□□□□□ -0.6
KDM4A-201ENST00000372396 TEKT1Q969V4 418 aa11.32□□□□□ -0.6
KDM4A-201ENST00000372396 BRIP1Q9BX63 1249 aa11.32□□□□□ -0.6
KDM4A-201ENST00000372396 V9GY48 417 aaPredicted RBP11.32□□□□□ -0.6
KDM4A-201ENST00000372396 TMCO5BA8MYB1 307 aa11.32□□□□□ -0.6
KDM4A-201ENST00000372396 URI1O94763 535 aaPredicted RBP11.32□□□□□ -0.6
KDM4A-201ENST00000372396 SKILP12757 684 aa11.32□□□□□ -0.6
KDM4A-201ENST00000372396 AMPD3Q01432 767 aa11.32□□□□□ -0.6
KDM4A-201ENST00000372396 SCARF1Q14162 830 aa11.32□□□□□ -0.6
KDM4A-201ENST00000372396 CALML4Q96GE6 196 aa11.32□□□□□ -0.6
KDM4A-201ENST00000372396 MTA3Q9BTC8 594 aa11.32□□□□□ -0.6
KDM4A-201ENST00000372396 BTDP43251 543 aa11.31□□□□□ -0.6
KDM4A-201ENST00000372396 NFIXQ14938 502 aa11.31□□□□□ -0.6
KDM4A-201ENST00000372396 NAA25Q14CX7 972 aa11.31□□□□□ -0.6
KDM4A-201ENST00000372396 CFAP100Q494V2 611 aa11.31□□□□□ -0.6
KDM4A-201ENST00000372396 TTC19Q6DKK2 380 aaPredicted RBP11.31□□□□□ -0.6
KDM4A-201ENST00000372396 OTUD7BQ6GQQ9 843 aa11.31□□□□□ -0.6
KDM4A-201ENST00000372396 TADA2BQ86TJ2 420 aa11.31□□□□□ -0.6
KDM4A-201ENST00000372396 JPH2Q9BR39 696 aaPredicted RBP11.31□□□□□ -0.6
KDM4A-201ENST00000372396 ATP8B1O43520 1251 aa11.31□□□□□ -0.6
KDM4A-201ENST00000372396 CUTAO60888 179 aa11.31□□□□□ -0.6
KDM4A-201ENST00000372396 MYSM1Q5VVJ2 828 aa11.31□□□□□ -0.6
KDM4A-201ENST00000372396 RPUSD2Q8IZ73 545 aaKnown RBP11.31□□□□□ -0.6
KDM4A-201ENST00000372396 FAM210AQ96ND0 272 aa11.31□□□□□ -0.6
KDM4A-201ENST00000372396 TTF2Q9UNY4 1162 aaKnown RBP11.31□□□□□ -0.6
KDM4A-201ENST00000372396 SHTN1A0MZ66 631 aa11.31□□□□□ -0.6
KDM4A-201ENST00000372396 GBP2P32456 591 aaPredicted RBP11.31□□□□□ -0.6
KDM4A-201ENST00000372396 N4BP2L2Q92802 583 aaPredicted RBP11.31□□□□□ -0.6
KDM4A-201ENST00000372396 MRC1P22897 1456 aa11.31□□□□□ -0.6
KDM4A-201ENST00000372396 BIN1O00499 593 aa11.31□□□□□ -0.6
KDM4A-201ENST00000372396 PRKAB2O43741 272 aa11.31□□□□□ -0.6
KDM4A-201ENST00000372396 ADD1P35611 737 aaKnown RBP11.31□□□□□ -0.6
KDM4A-201ENST00000372396 EPS15P42566 896 aa11.31□□□□□ -0.6
KDM4A-201ENST00000372396 NAP1L1P55209 391 aaKnown RBP11.31□□□□□ -0.6
KDM4A-201ENST00000372396 TXNRD1Q16881 649 aa11.31□□□□□ -0.6
KDM4A-201ENST00000372396 SWT1Q5T5J6 900 aaKnown RBP11.31□□□□□ -0.6
KDM4A-201ENST00000372396 RMND1Q9NWS8 449 aa11.31□□□□□ -0.6
KDM4A-201ENST00000372396 PNPLA7Q6ZV29 1317 aa11.3□□□□□ -0.6
KDM4A-201ENST00000372396 MECOMQ03112 1051 aa11.3□□□□□ -0.6
KDM4A-201ENST00000372396 LRMPQ12912 555 aa11.3□□□□□ -0.6
KDM4A-201ENST00000372396 MSL1Q68DK7 614 aa11.3□□□□□ -0.6
KDM4A-201ENST00000372396 WWC2Q6AWC2 1192 aa11.3□□□□□ -0.6
KDM4A-201ENST00000372396 OTUD6BQ8N6M0 293 aa11.3□□□□□ -0.6
KDM4A-201ENST00000372396 SH3GL3Q99963 347 aa11.3□□□□□ -0.6
KDM4A-201ENST00000372396 LRRC27Q9C0I9 530 aa11.3□□□□□ -0.6
KDM4A-201ENST00000372396 DYNLL1P63167 89 aaKnown RBP11.3□□□□□ -0.6
KDM4A-201ENST00000372396 NAIF1Q69YI7 327 aaPredicted RBP11.3□□□□□ -0.6
KDM4A-201ENST00000372396 STAG1Q8WVM7 1258 aa11.3□□□□□ -0.6
KDM4A-201ENST00000372396 COL14A1Q05707 1796 aaKnown RBP11.3□□□□□ -0.6
KDM4A-201ENST00000372396 EBAG9O00559 213 aa11.3□□□□□ -0.6
KDM4A-201ENST00000372396 SSBP05455 408 aaKnown RBP eCLIP11.3□□□□□ -0.6
KDM4A-201ENST00000372396 POTEDQ86YR6 584 aa11.3□□□□□ -0.6
KDM4A-201ENST00000372396 KCNB2Q92953 911 aa11.3□□□□□ -0.6
KDM4A-201ENST00000372396 EZRP15311 586 aaKnown RBP11.29□□□□□ -0.6
KDM4A-201ENST00000372396 GSDMDP57764 484 aa11.29□□□□□ -0.6
KDM4A-201ENST00000372396 TNIP1Q15025 636 aa11.29□□□□□ -0.6
KDM4A-201ENST00000372396 FAM47AQ5JRC9 791 aa11.29□□□□□ -0.6
KDM4A-201ENST00000372396 FNBP4Q8N3X1 1017 aaPredicted RBP11.29□□□□□ -0.6
KDM4A-201ENST00000372396 CCDC97Q96F63 343 aaPredicted RBP11.29□□□□□ -0.6
KDM4A-201ENST00000372396 USP40Q9NVE5 1235 aa11.29□□□□□ -0.6
KDM4A-201ENST00000372396 SNAP23O00161 211 aa11.29□□□□□ -0.6
KDM4A-201ENST00000372396 LIG3P49916 1009 aa11.29□□□□□ -0.6
KDM4A-201ENST00000372396 MCM6Q14566 821 aa11.29□□□□□ -0.6
KDM4A-201ENST00000372396 CC2D2BQ6DHV5 1058 aa11.29□□□□□ -0.6
KDM4A-201ENST00000372396 SRRTQ9BXP5 876 aaKnown RBP11.29□□□□□ -0.6
KDM4A-201ENST00000372396 COA1Q9GZY4 146 aa11.29□□□□□ -0.6
KDM4A-201ENST00000372396 DNAJC25Q9H1X3 360 aa11.29□□□□□ -0.6
KDM4A-201ENST00000372396 SCP2P22307 547 aa11.29□□□□□ -0.6
KDM4A-201ENST00000372396 SLC10A5Q5PT55 438 aa11.29□□□□□ -0.6
KDM4A-201ENST00000372396 MB21D2Q8IYB1 491 aaPredicted RBP11.29□□□□□ -0.6
KDM4A-201ENST00000372396 ANKRD65E5RJM6 399 aa11.29□□□□□ -0.6
KDM4A-201ENST00000372396 SFPQP23246 707 aaKnown RBP eCLIP11.29□□□□□ -0.6
KDM4A-201ENST00000372396 TNNI2P48788 182 aa11.29□□□□□ -0.6
KDM4A-201ENST00000372396 CEP57Q86XR8 500 aa11.29□□□□□ -0.6
KDM4A-201ENST00000372396 LARGE2Q8N3Y3 721 aa11.29□□□□□ -0.6
KDM4A-201ENST00000372396 TMEM87AQ8NBN3 555 aa11.29□□□□□ -0.6
KDM4A-201ENST00000372396 MASTLQ96GX5 879 aa11.29□□□□□ -0.6
KDM4A-201ENST00000372396 FAM84BQ96KN1 310 aaPredicted RBP11.29□□□□□ -0.6
KDM4A-201ENST00000372396 NAP1L4Q99733 375 aaKnown RBP11.29□□□□□ -0.6
KDM4A-201ENST00000372396 GLT8D2Q9H1C3 349 aa11.29□□□□□ -0.6
KDM4A-201ENST00000372396 ZNF446Q9NWS9 450 aa11.29□□□□□ -0.6
KDM4A-201ENST00000372396 ADAM21Q9UKJ8 722 aa11.29□□□□□ -0.6
KDM4A-201ENST00000372396 A0A1B0GVL5 298 aa11.28□□□□□ -0.6
KDM4A-201ENST00000372396 DTNBO60941 627 aa11.28□□□□□ -0.6
KDM4A-201ENST00000372396 ADALQ6DHV7 355 aa11.28□□□□□ -0.6
KDM4A-201ENST00000372396 RNF26Q9BY78 433 aaPredicted RBP11.28□□□□□ -0.6
KDM4A-201ENST00000372396 IL25Q9H293 177 aa11.28□□□□□ -0.6
KDM4A-201ENST00000372396 PPIP5K2O43314 1243 aa11.28□□□□□ -0.6
KDM4A-201ENST00000372396 FMNL1O95466 1100 aaPredicted RBP11.28□□□□□ -0.6
KDM4A-201ENST00000372396 ZNHIT6Q9NWK9 470 aaKnown RBP11.28□□□□□ -0.6
KDM4A-201ENST00000372396 ZSWIM5Q9P217 1185 aa11.28□□□□□ -0.6
KDM4A-201ENST00000372396 MMP10P09238 476 aa11.28□□□□□ -0.6
KDM4A-201ENST00000372396 RCAN1P53805 252 aa11.28□□□□□ -0.6
KDM4A-201ENST00000372396 KLHL10Q6JEL2 608 aa11.28□□□□□ -0.6
KDM4A-201ENST00000372396 LRP10Q7Z4F1 713 aa11.28□□□□□ -0.6
KDM4A-201ENST00000372396 NOSTRINQ8IVI9 506 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms