RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 C2orf54Q08AI8 447 aa6.15□□□□□ -1.43
ATG4A-204ENST00000372246 NR1I3Q14994 352 aa6.15□□□□□ -1.43
ATG4A-204ENST00000372246 ESCO1Q5FWF5 840 aa6.15□□□□□ -1.43
ATG4A-204ENST00000372246 RALYLQ86SE5 291 aaKnown RBP6.15□□□□□ -1.43
ATG4A-204ENST00000372246 IP6K1Q92551 441 aa6.15□□□□□ -1.43
ATG4A-204ENST00000372246 DSCC1Q9BVC3 393 aa6.15□□□□□ -1.43
ATG4A-204ENST00000372246 YY1AP1Q9H869 796 aa6.15□□□□□ -1.43
ATG4A-204ENST00000372246 FAM217BQ9NTX9 383 aaPredicted RBP6.15□□□□□ -1.43
ATG4A-204ENST00000372246 CWC15Q9P013 229 aaKnown RBP6.15□□□□□ -1.43
ATG4A-204ENST00000372246 REXO2Q9Y3B8 237 aaKnown RBP6.15□□□□□ -1.43
ATG4A-204ENST00000372246 RGPD2P0DJD1 1756 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 TESPA1A2RU30 521 aaPredicted RBP6.14□□□□□ -1.43
ATG4A-204ENST00000372246 GOLGA8CPA6NN73 597 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 MYO1FO00160 1098 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 ZNF213O14771 459 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 BACH1O14867 736 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 GPAA1O43292 621 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 KIF5CO60282 957 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 CXCR5P32302 372 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 ARHGAP25P42331 645 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 MAGEA9P43362 315 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 TDO2P48775 406 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 KCTD16Q68DU8 428 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 SH2D3CQ8N5H7 860 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 PROCA1Q8NCQ7 364 aaPredicted RBP6.14□□□□□ -1.43
ATG4A-204ENST00000372246 HELBQ8NG08 1087 aaPredicted RBP6.14□□□□□ -1.43
ATG4A-204ENST00000372246 ANKRD24Q8TF21 1146 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 ORAI2Q96SN7 254 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 PLIN2Q99541 437 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 EFCC1Q9HA90 598 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 CABP5Q9NP86 173 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 VPS54Q9P1Q0 977 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 CTNND2Q9UQB3 1225 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 NCAPD2Q15021 1401 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 CTAGE15A4D2H0 777 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 CTAGE9A4FU28 777 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 TRIM49BA6NDI0 452 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 AGPSO00116 658 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 PRKAB2O43741 272 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 IDH1O75874 414 aaKnown RBP6.14□□□□□ -1.43
ATG4A-204ENST00000372246 CTAGE8P0CG41 777 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 ATP1A2P50993 1020 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 PTPN5P54829 565 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 CORO7P57737 925 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 CYP27A1Q02318 531 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 BRD3Q15059 726 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 IMMTQ16891 758 aaKnown RBP6.14□□□□□ -1.43
ATG4A-204ENST00000372246 FAM98CQ17RN3 349 aaKnown RBP6.14□□□□□ -1.43
ATG4A-204ENST00000372246 SLC4A8Q2Y0W8 1093 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 HSP90B2PQ58FF3 399 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 CT47A1Q5JQC4 288 aaPredicted RBP6.14□□□□□ -1.43
ATG4A-204ENST00000372246 KCNV1Q6PIU1 500 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 APOA5Q6Q788 366 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 LRP10Q7Z4F1 713 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 BRAPQ7Z569 592 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 CTAGE6Q86UF2 777 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 PPFIBP1Q86W92 1011 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 CTAGE4Q8IX94 777 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 DIS3L2Q8IYB7 885 aaKnown RBP6.14□□□□□ -1.43
ATG4A-204ENST00000372246 KIRREL3Q8IZU9 778 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 CABLES1Q8TDN4 633 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 NUP133Q8WUM0 1156 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 TSPYL1Q9H0U9 437 aa6.14□□□□□ -1.43
ATG4A-204ENST00000372246 TMEM2Q9UHN6 1383 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 CCP110O43303 1012 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 MFAP3LO75121 409 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 TPM1P09493 284 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 VEGFAP15692 232 aaPredicted RBP6.13□□□□□ -1.43
ATG4A-204ENST00000372246 TRDNQ13061 729 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 MAP9Q49MG5 647 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 CC2D2BQ6DHV5 1058 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 PROSER2Q86WR7 435 aaPredicted RBP6.13□□□□□ -1.43
ATG4A-204ENST00000372246 XAGE2Q96GT9 111 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 PSMD1Q99460 953 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 NUP88Q99567 741 aaPredicted RBP6.13□□□□□ -1.43
ATG4A-204ENST00000372246 HELLSQ9NRZ9 838 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 NLRP2Q9NX02 1062 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 FBXO2Q9UK22 296 aaPredicted RBP6.13□□□□□ -1.43
ATG4A-204ENST00000372246 RAB21Q9UL25 225 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 HPCAL4Q9UM19 191 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 RICTORQ6R327 1708 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 NALCNQ8IZF0 1738 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 ZC3H4Q9UPT8 1303 aaKnown RBP6.13□□□□□ -1.43
ATG4A-204ENST00000372246 MYH15Q9Y2K3 1946 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 A0A1B0GTH6 734 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 MACROD2A1Z1Q3 448 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 ZSCAN5CA6NGD5 496 aaPredicted RBP6.13□□□□□ -1.43
ATG4A-204ENST00000372246 GOLGA8AA7E2F4 631 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 NBPF26B4DH59 902 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 SMAPO00193 183 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 ATP8B1O43520 1251 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 ACTN4O43707 911 aaKnown RBP6.13□□□□□ -1.43
ATG4A-204ENST00000372246 PRPF6O94906 941 aaKnown RBP6.13□□□□□ -1.43
ATG4A-204ENST00000372246 HOXB7P09629 217 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 GUCY2CP25092 1073 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 IARSP41252 1262 aaKnown RBP6.13□□□□□ -1.43
ATG4A-204ENST00000372246 CASP7P55210 303 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 APBA1Q02410 837 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 PTGDRQ13258 359 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 MORC3Q14149 939 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms