RNA–Protein interactions for RNA: ENST00000369509.1

VANGL1-203, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-203ENST00000369509 DEXIO95424 95 aa12.86□□□□□ -0.35
VANGL1-203ENST00000369509 TOP1P11387 765 aaKnown RBP12.86□□□□□ -0.35
VANGL1-203ENST00000369509 ARHGAP27Q6ZUM4 889 aa12.86□□□□□ -0.35
VANGL1-203ENST00000369509 CLEC10AQ8IUN9 316 aa12.86□□□□□ -0.35
VANGL1-203ENST00000369509 MICALL2Q8IY33 904 aa12.86□□□□□ -0.35
VANGL1-203ENST00000369509 TRIM22Q8IYM9 498 aa12.86□□□□□ -0.35
VANGL1-203ENST00000369509 SRBD1Q8N5C6 995 aaKnown RBP12.86□□□□□ -0.35
VANGL1-203ENST00000369509 CCDC17Q96LX7 622 aa12.86□□□□□ -0.35
VANGL1-203ENST00000369509 CSRNP1Q96S65 589 aa12.86□□□□□ -0.35
VANGL1-203ENST00000369509 MAD2L2Q9UI95 211 aa12.86□□□□□ -0.35
VANGL1-203ENST00000369509 PRPF3O43395 683 aaKnown RBP12.85□□□□□ -0.35
VANGL1-203ENST00000369509 YBX3P16989 372 aaKnown RBP eCLIP12.85□□□□□ -0.35
VANGL1-203ENST00000369509 PKN1Q16512 942 aa12.85□□□□□ -0.35
VANGL1-203ENST00000369509 SHROOM1Q2M3G4 852 aaPredicted RBP12.85□□□□□ -0.35
VANGL1-203ENST00000369509 KRT40Q6A162 431 aa12.85□□□□□ -0.35
VANGL1-203ENST00000369509 RASGRP2Q7LDG7 609 aa12.85□□□□□ -0.35
VANGL1-203ENST00000369509 CCDC82Q8N4S0 544 aa12.85□□□□□ -0.35
VANGL1-203ENST00000369509 SHISA4Q96DD7 197 aa12.85□□□□□ -0.35
VANGL1-203ENST00000369509 PALM3A6NDB9 673 aaPredicted RBP12.85□□□□□ -0.35
VANGL1-203ENST00000369509 KIF5BP33176 963 aa12.85□□□□□ -0.35
VANGL1-203ENST00000369509 KIF23Q02241 960 aaPredicted RBP12.85□□□□□ -0.35
VANGL1-203ENST00000369509 SLC35G1Q2M3R5 365 aa12.85□□□□□ -0.35
VANGL1-203ENST00000369509 LRSAM1Q6UWE0 723 aa12.85□□□□□ -0.35
VANGL1-203ENST00000369509 USP48Q86UV5 1035 aa12.85□□□□□ -0.35
VANGL1-203ENST00000369509 CDAN1Q8IWY9 1227 aa12.85□□□□□ -0.35
VANGL1-203ENST00000369509 STAG2Q8N3U4 1231 aa12.85□□□□□ -0.35
VANGL1-203ENST00000369509 WASF1Q92558 559 aa12.85□□□□□ -0.35
VANGL1-203ENST00000369509 VEZTQ9HBM0 779 aa12.85□□□□□ -0.35
VANGL1-203ENST00000369509 HERC5Q9UII4 1024 aaKnown RBP12.85□□□□□ -0.35
VANGL1-203ENST00000369509 GJA3Q9Y6H8 435 aa12.85□□□□□ -0.35
VANGL1-203ENST00000369509 KIF28PB7ZC32 967 aa12.84□□□□□ -0.35
VANGL1-203ENST00000369509 MYO1BO43795 1136 aa12.84□□□□□ -0.35
VANGL1-203ENST00000369509 KRT85P78386 507 aa12.84□□□□□ -0.35
VANGL1-203ENST00000369509 CERKLQ49MI3 558 aaPredicted RBP12.84□□□□□ -0.35
VANGL1-203ENST00000369509 TMEM39BQ9GZU3 492 aa12.84□□□□□ -0.35
VANGL1-203ENST00000369509 CNOT7Q9UIV1 285 aaKnown RBP12.84□□□□□ -0.35
VANGL1-203ENST00000369509 FIBPO43427 364 aa12.84□□□□□ -0.35
VANGL1-203ENST00000369509 TTLL1O95922 423 aa12.84□□□□□ -0.35
VANGL1-203ENST00000369509 SNHG28P0DPA3 235 aa12.84□□□□□ -0.35
VANGL1-203ENST00000369509 RRP1BQ14684 758 aaKnown RBP12.84□□□□□ -0.35
VANGL1-203ENST00000369509 SAMD7Q7Z3H4 446 aa12.84□□□□□ -0.35
VANGL1-203ENST00000369509 RBM27Q9P2N5 1060 aaKnown RBP12.84□□□□□ -0.35
VANGL1-203ENST00000369509 POLR2AP24928 1970 aaKnown RBP12.83□□□□□ -0.36
VANGL1-203ENST00000369509 JAG1P78504 1218 aa12.83□□□□□ -0.36
VANGL1-203ENST00000369509 GPC2Q8N158 579 aa12.83□□□□□ -0.36
VANGL1-203ENST00000369509 ASTN2O75129 1339 aaPredicted RBP12.82□□□□□ -0.36
VANGL1-203ENST00000369509 ELP1O95163 1332 aa12.82□□□□□ -0.36
VANGL1-203ENST00000369509 hCG_1642624A0A1W2PR95 340 aa12.82□□□□□ -0.36
VANGL1-203ENST00000369509 MPHOSPH10O00566 681 aaKnown RBP12.82□□□□□ -0.36
VANGL1-203ENST00000369509 CYTH3O43739 400 aa12.82□□□□□ -0.36
VANGL1-203ENST00000369509 GADD45BO75293 160 aaPredicted RBP12.82□□□□□ -0.36
VANGL1-203ENST00000369509 MMP1P03956 469 aa12.82□□□□□ -0.36
VANGL1-203ENST00000369509 PDHBP11177 359 aa12.82□□□□□ -0.36
VANGL1-203ENST00000369509 GNAQP50148 359 aa12.82□□□□□ -0.36
VANGL1-203ENST00000369509 MAP3K10Q02779 954 aa12.82□□□□□ -0.36
VANGL1-203ENST00000369509 CSPP1Q1MSJ5 1256 aa12.82□□□□□ -0.36
VANGL1-203ENST00000369509 TMEM179Q6ZVK1 233 aa12.82□□□□□ -0.36
VANGL1-203ENST00000369509 BRAPQ7Z569 592 aa12.82□□□□□ -0.36
VANGL1-203ENST00000369509 LRRC47Q8N1G4 583 aaKnown RBP12.82□□□□□ -0.36
VANGL1-203ENST00000369509 TRIM34Q9BYJ4 488 aa12.82□□□□□ -0.36
VANGL1-203ENST00000369509 TMEM63CQ9P1W3 806 aa12.82□□□□□ -0.36
VANGL1-203ENST00000369509 V9GY48 417 aaPredicted RBP12.82□□□□□ -0.36
VANGL1-203ENST00000369509 TBC1D12O60347 775 aa12.82□□□□□ -0.36
VANGL1-203ENST00000369509 GDF11O95390 407 aa12.82□□□□□ -0.36
VANGL1-203ENST00000369509 U2AF2P26368 475 aaKnown RBP eCLIP12.82□□□□□ -0.36
VANGL1-203ENST00000369509 KIF4BQ2VIQ3 1234 aa12.82□□□□□ -0.36
VANGL1-203ENST00000369509 TBC1D10BQ4KMP7 808 aaPredicted RBP12.82□□□□□ -0.36
VANGL1-203ENST00000369509 SIAH1Q8IUQ4 282 aa12.82□□□□□ -0.36
VANGL1-203ENST00000369509 TEPSINQ96N21 525 aa12.82□□□□□ -0.36
VANGL1-203ENST00000369509 GPRC5DQ9NZD1 345 aa12.82□□□□□ -0.36
VANGL1-203ENST00000369509 CLIP2Q9UDT6 1046 aa12.82□□□□□ -0.36
VANGL1-203ENST00000369509 SYCE3A1L190 88 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 USP17L5A8MUK1 530 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 AKAP17AQ02040 695 aaKnown RBP12.81□□□□□ -0.36
VANGL1-203ENST00000369509 TRIM29Q14134 588 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 SEPT2Q15019 361 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 PFKFB3Q16875 520 aaPredicted RBP12.81□□□□□ -0.36
VANGL1-203ENST00000369509 ABCB5Q2M3G0 1257 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 PPP4R3BQ5MIZ7 849 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 RBM26Q5T8P6 1007 aaKnown RBP12.81□□□□□ -0.36
VANGL1-203ENST00000369509 USP17L2Q6R6M4 530 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 MKL1Q969V6 931 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 SPZ1Q9BXG8 430 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 SCAND2PQ9GZW5 306 aaPredicted RBP12.81□□□□□ -0.36
VANGL1-203ENST00000369509 RBSNQ9H1K0 784 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 KANSL2Q9H9L4 492 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.81□□□□□ -0.36
VANGL1-203ENST00000369509 NYAP2Q9P242 653 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 KCNJ14Q9UNX9 436 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 DOCK1Q14185 1865 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 PARP1P09874 1014 aaKnown RBP12.81□□□□□ -0.36
VANGL1-203ENST00000369509 GOLGA8HP0CJ92 632 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 VEGFAP15692 232 aaPredicted RBP12.81□□□□□ -0.36
VANGL1-203ENST00000369509 RASA3Q14644 834 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 NPY5RQ15761 445 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 HS1BP3Q53T59 392 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 MYSM1Q5VVJ2 828 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 ATL3Q6DD88 541 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 LEO1Q8WVC0 666 aaPredicted RBP12.81□□□□□ -0.36
VANGL1-203ENST00000369509 USP28Q96RU2 1077 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms