RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 METTL16Q86W50 562 aaKnown RBP19.45■□□□□ 0.7
PHGDH-202ENST00000369409 MICALL2Q8IY33 904 aa19.45■□□□□ 0.7
PHGDH-202ENST00000369409 SPATA32Q96LK8 384 aa19.45■□□□□ 0.7
PHGDH-202ENST00000369409 UTRNP46939 3433 aa19.45■□□□□ 0.7
PHGDH-202ENST00000369409 TTLL1O95922 423 aa19.45■□□□□ 0.7
PHGDH-202ENST00000369409 EGFRP00533 1210 aa19.45■□□□□ 0.7
PHGDH-202ENST00000369409 GSE1Q14687 1217 aa19.45■□□□□ 0.7
PHGDH-202ENST00000369409 FKBP1CQ5VVH2 108 aa19.45■□□□□ 0.7
PHGDH-202ENST00000369409 TATDN1Q6P1N9 297 aa19.45■□□□□ 0.7
PHGDH-202ENST00000369409 FTOQ9C0B1 505 aaKnown RBP eCLIP19.45■□□□□ 0.7
PHGDH-202ENST00000369409 KCNJ14Q9UNX9 436 aa19.45■□□□□ 0.7
PHGDH-202ENST00000369409 MMP1P03956 469 aa19.44■□□□□ 0.7
PHGDH-202ENST00000369409 GNAQP50148 359 aa19.44■□□□□ 0.7
PHGDH-202ENST00000369409 UBE2HP62256 183 aa19.44■□□□□ 0.7
PHGDH-202ENST00000369409 GNL2Q13823 731 aaKnown RBP19.44■□□□□ 0.7
PHGDH-202ENST00000369409 RBM26Q5T8P6 1007 aaKnown RBP19.44■□□□□ 0.7
PHGDH-202ENST00000369409 CAVIN1Q6NZI2 390 aaKnown RBP19.44■□□□□ 0.7
PHGDH-202ENST00000369409 LEO1Q8WVC0 666 aaPredicted RBP19.44■□□□□ 0.7
PHGDH-202ENST00000369409 PIBF1Q8WXW3 757 aa19.44■□□□□ 0.7
PHGDH-202ENST00000369409 ZNF396Q96N95 335 aaPredicted RBP19.44■□□□□ 0.7
PHGDH-202ENST00000369409 USP28Q96RU2 1077 aa19.44■□□□□ 0.7
PHGDH-202ENST00000369409 SYT17Q9BSW7 474 aa19.44■□□□□ 0.7
PHGDH-202ENST00000369409 ELP1O95163 1332 aa19.44■□□□□ 0.7
PHGDH-202ENST00000369409 PALM3A6NDB9 673 aaPredicted RBP19.43■□□□□ 0.7
PHGDH-202ENST00000369409 GDF11O95390 407 aa19.43■□□□□ 0.7
PHGDH-202ENST00000369409 GOLGA8HP0CJ92 632 aa19.43■□□□□ 0.7
PHGDH-202ENST00000369409 LMNB1P20700 586 aa19.43■□□□□ 0.7
PHGDH-202ENST00000369409 MMP14P50281 582 aa19.43■□□□□ 0.7
PHGDH-202ENST00000369409 CEBPZQ03701 1054 aaKnown RBP19.43■□□□□ 0.7
PHGDH-202ENST00000369409 DPF2Q92785 391 aa19.43■□□□□ 0.7
PHGDH-202ENST00000369409 SHISA4Q96DD7 197 aa19.43■□□□□ 0.7
PHGDH-202ENST00000369409 TMEM39BQ9GZU3 492 aa19.43■□□□□ 0.7
PHGDH-202ENST00000369409 VPS54Q9P1Q0 977 aa19.43■□□□□ 0.7
PHGDH-202ENST00000369409 CLIP2Q9UDT6 1046 aa19.43■□□□□ 0.7
PHGDH-202ENST00000369409 CFAP45Q9UL16 551 aa19.43■□□□□ 0.7
PHGDH-202ENST00000369409 ATAD5Q96QE3 1844 aa19.43■□□□□ 0.7
PHGDH-202ENST00000369409 PARP1P09874 1014 aaKnown RBP19.43■□□□□ 0.7
PHGDH-202ENST00000369409 ATP2B2Q01814 1243 aa19.43■□□□□ 0.7
PHGDH-202ENST00000369409 MYSM1Q5VVJ2 828 aa19.43■□□□□ 0.7
PHGDH-202ENST00000369409 USP17L2Q6R6M4 530 aa19.43■□□□□ 0.7
PHGDH-202ENST00000369409 FAM83AQ86UY5 434 aa19.43■□□□□ 0.7
PHGDH-202ENST00000369409 CDAN1Q8IWY9 1227 aa19.43■□□□□ 0.7
PHGDH-202ENST00000369409 RBM27Q9P2N5 1060 aaKnown RBP19.43■□□□□ 0.7
PHGDH-202ENST00000369409 HERC5Q9UII4 1024 aaKnown RBP19.43■□□□□ 0.7
PHGDH-202ENST00000369409 CNOT7Q9UIV1 285 aaKnown RBP19.43■□□□□ 0.7
PHGDH-202ENST00000369409 XBP1P17861 261 aa19.42■□□□□ 0.7
PHGDH-202ENST00000369409 SAFBQ15424 915 aaKnown RBP eCLIP19.42■□□□□ 0.7
PHGDH-202ENST00000369409 SLC35G1Q2M3R5 365 aa19.42■□□□□ 0.7
PHGDH-202ENST00000369409 SAMD7Q7Z3H4 446 aa19.42■□□□□ 0.7
PHGDH-202ENST00000369409 DIS3L2Q8IYB7 885 aaKnown RBP19.42■□□□□ 0.7
PHGDH-202ENST00000369409 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.42■□□□□ 0.72e-7■■■■□ 19.6
PHGDH-202ENST00000369409 USP17L5A8MUK1 530 aa19.41■□□□□ 0.7
PHGDH-202ENST00000369409 PDHBP11177 359 aa19.41■□□□□ 0.7
PHGDH-202ENST00000369409 SCG2P13521 617 aa19.41■□□□□ 0.7
PHGDH-202ENST00000369409 ABCB5Q2M3G0 1257 aa19.41■□□□□ 0.7
PHGDH-202ENST00000369409 TBC1D10BQ4KMP7 808 aaPredicted RBP19.41■□□□□ 0.7
PHGDH-202ENST00000369409 ATL3Q6DD88 541 aa19.41■□□□□ 0.7
PHGDH-202ENST00000369409 KLRF2D3W0D1 207 aa19.41■□□□□ 0.7
PHGDH-202ENST00000369409 U2AF2P26368 475 aaKnown RBP eCLIP19.41■□□□□ 0.74e-10■■□□□ 11.5
PHGDH-202ENST00000369409 SEPT2Q15019 361 aa19.41■□□□□ 0.7
PHGDH-202ENST00000369409 PFKFB3Q16875 520 aaPredicted RBP19.41■□□□□ 0.7
PHGDH-202ENST00000369409 PPP4R3BQ5MIZ7 849 aa19.41■□□□□ 0.7
PHGDH-202ENST00000369409 TMEM179Q6ZVK1 233 aa19.41■□□□□ 0.7
PHGDH-202ENST00000369409 CPVLQ9H3G5 476 aa19.41■□□□□ 0.7
PHGDH-202ENST00000369409 SCAF8Q9UPN6 1271 aaKnown RBP19.41■□□□□ 0.7
PHGDH-202ENST00000369409 FRMPD2Q68DX3 1309 aaPredicted RBP19.4■□□□□ 0.7
PHGDH-202ENST00000369409 BTBD18B2RXH4 712 aa19.4■□□□□ 0.7
PHGDH-202ENST00000369409 CYTH3O43739 400 aa19.4■□□□□ 0.7
PHGDH-202ENST00000369409 RRP1BQ14684 758 aaKnown RBP19.4■□□□□ 0.7
PHGDH-202ENST00000369409 LZTS2Q9BRK4 669 aa19.4■□□□□ 0.7
PHGDH-202ENST00000369409 TMEM63CQ9P1W3 806 aa19.4■□□□□ 0.7
PHGDH-202ENST00000369409 TNNI2P48788 182 aa19.39■□□□□ 0.7
PHGDH-202ENST00000369409 ICA1Q05084 483 aa19.39■□□□□ 0.7
PHGDH-202ENST00000369409 KIF4BQ2VIQ3 1234 aa19.39■□□□□ 0.7
PHGDH-202ENST00000369409 PHF20Q9BVI0 1012 aa19.39■□□□□ 0.7
PHGDH-202ENST00000369409 SPZ1Q9BXG8 430 aa19.39■□□□□ 0.7
PHGDH-202ENST00000369409 KANSL2Q9H9L4 492 aa19.39■□□□□ 0.7
PHGDH-202ENST00000369409 ASTN2O75129 1339 aaPredicted RBP19.39■□□□□ 0.69
PHGDH-202ENST00000369409 GH2P01242 217 aa19.39■□□□□ 0.69
PHGDH-202ENST00000369409 SNHG28P0DPA3 235 aa19.39■□□□□ 0.69
PHGDH-202ENST00000369409 EEF2P13639 858 aaKnown RBP19.39■□□□□ 0.69
PHGDH-202ENST00000369409 VEGFAP15692 232 aaPredicted RBP19.39■□□□□ 0.69
PHGDH-202ENST00000369409 YBX3P16989 372 aaKnown RBP eCLIP19.39■□□□□ 0.692e-7■□□□□ 9.8
PHGDH-202ENST00000369409 JAG1P78504 1218 aa19.39■□□□□ 0.69
PHGDH-202ENST00000369409 NOSTRINQ8IVI9 506 aa19.39■□□□□ 0.69
PHGDH-202ENST00000369409 OXER1Q8TDS5 423 aa19.39■□□□□ 0.69
PHGDH-202ENST00000369409 NR5A1Q13285 461 aa19.38■□□□□ 0.69
PHGDH-202ENST00000369409 ASPRV1Q53RT3 343 aa19.38■□□□□ 0.69
PHGDH-202ENST00000369409 GPKOWQ92917 476 aaPredicted RBP eCLIP19.38■□□□□ 0.69
PHGDH-202ENST00000369409 FOXP1Q9H334 677 aaPredicted RBP19.38■□□□□ 0.69
PHGDH-202ENST00000369409 NYAP2Q9P242 653 aa19.38■□□□□ 0.69
PHGDH-202ENST00000369409 PGAP2Q9UHJ9 254 aa19.38■□□□□ 0.69
PHGDH-202ENST00000369409 RCOR1Q9UKL0 485 aa19.38■□□□□ 0.69
PHGDH-202ENST00000369409 CLIC4Q9Y696 253 aa19.38■□□□□ 0.69
PHGDH-202ENST00000369409 TNFAIP1Q13829 316 aa19.37■□□□□ 0.69
PHGDH-202ENST00000369409 RASA3Q14644 834 aa19.37■□□□□ 0.69
PHGDH-202ENST00000369409 GPC2Q8N158 579 aa19.37■□□□□ 0.69
PHGDH-202ENST00000369409 CABP5Q9NP86 173 aa19.37■□□□□ 0.69
PHGDH-202ENST00000369409 POLR3EQ9NVU0 708 aa19.37■□□□□ 0.69
PHGDH-202ENST00000369409 RTEL1Q9NZ71 1219 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms