RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 UBE4AQ14139 1066 aa13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 MYOM1P52179 1685 aa13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 FNBP4Q8N3X1 1017 aaPredicted RBP13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 LIFRP42702 1097 aa13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 CTSWP56202 376 aa13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 MAGEA1P43355 309 aa13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 CEP57Q86XR8 500 aa13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 MSANTD4Q8NCY6 345 aa13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 FBF1Q8TES7 1133 aa13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 KIFAP3Q92845 792 aa13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 PARP2Q9UGN5 583 aa13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 ADKP55263 362 aaKnown RBP13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 IMPG2Q9BZV3 1241 aa13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 DDX41Q9UJV9 622 aaKnown RBP13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 HYOU1Q9Y4L1 999 aa13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 CYP21A2P08686 494 aa13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 GRIPAP1Q4V328 841 aa13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 ATP6V0A2Q9Y487 856 aa13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 DPCR1Q3MIW9 517 aa13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 UBLCP1Q8WVY7 318 aaPredicted RBP13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 TRIM7Q9C029 511 aa13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 TAB2Q9NYJ8 693 aa13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 ADGRB2O60241 1585 aa13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 USP42Q9H9J4 1324 aaKnown RBP13.12□□□□□ -0.31
CDC42BPA-202ENST00000366764 TRIM37O94972 964 aa13.11□□□□□ -0.31
CDC42BPA-202ENST00000366764 SEMA3FQ13275 785 aa13.11□□□□□ -0.31
CDC42BPA-202ENST00000366764 OTUD7BQ6GQQ9 843 aa13.11□□□□□ -0.31
CDC42BPA-202ENST00000366764 ZBTB38Q8NAP3 1195 aaPredicted RBP13.11□□□□□ -0.31
CDC42BPA-202ENST00000366764 SMARCC2Q8TAQ2 1214 aa13.11□□□□□ -0.31
CDC42BPA-202ENST00000366764 ENOX1Q8TC92 643 aaKnown RBP13.11□□□□□ -0.31
CDC42BPA-202ENST00000366764 ASIC2Q16515 512 aa13.11□□□□□ -0.31
CDC42BPA-202ENST00000366764 RPS6KA1Q15418 735 aa13.11□□□□□ -0.31
CDC42BPA-202ENST00000366764 MTA3Q9BTC8 594 aa13.11□□□□□ -0.31
CDC42BPA-202ENST00000366764 BZW2Q9Y6E2 419 aaKnown RBP13.11□□□□□ -0.31
CDC42BPA-202ENST00000366764 ZSCAN10Q96SZ4 725 aaPredicted RBP13.11□□□□□ -0.31
CDC42BPA-202ENST00000366764 EPN1Q9Y6I3 576 aaPredicted RBP13.11□□□□□ -0.31
CDC42BPA-202ENST00000366764 CCNT1O60563 726 aaKnown RBP13.11□□□□□ -0.31
CDC42BPA-202ENST00000366764 PLA2G4DQ86XP0 818 aa13.11□□□□□ -0.31
CDC42BPA-202ENST00000366764 APOA5Q6Q788 366 aa13.11□□□□□ -0.31
CDC42BPA-202ENST00000366764 ARMT1Q9H993 441 aa13.11□□□□□ -0.31
CDC42BPA-202ENST00000366764 STIM2Q9P246 746 aa13.11□□□□□ -0.31
CDC42BPA-202ENST00000366764 PREX1Q8TCU6 1659 aa13.11□□□□□ -0.31
CDC42BPA-202ENST00000366764 C11orf57Q6ZUT1 292 aaPredicted RBP13.11□□□□□ -0.31
CDC42BPA-202ENST00000366764 DHTKD1Q96HY7 919 aaPredicted RBP13.11□□□□□ -0.31
CDC42BPA-202ENST00000366764 AK8Q96MA6 479 aa13.11□□□□□ -0.31
CDC42BPA-202ENST00000366764 ZAP70P43403 619 aa13.1□□□□□ -0.31
CDC42BPA-202ENST00000366764 CALCRLQ16602 461 aa13.1□□□□□ -0.31
CDC42BPA-202ENST00000366764 LETM2Q2VYF4 491 aa13.1□□□□□ -0.31
CDC42BPA-202ENST00000366764 PPARAQ07869 468 aa13.1□□□□□ -0.31
CDC42BPA-202ENST00000366764 TSC1Q92574 1164 aa13.1□□□□□ -0.31
CDC42BPA-202ENST00000366764 SPATA24Q86W54 205 aa13.1□□□□□ -0.31
CDC42BPA-202ENST00000366764 MPHOSPH6Q99547 160 aaKnown RBP13.1□□□□□ -0.31
CDC42BPA-202ENST00000366764 CCDC6Q16204 474 aa13.1□□□□□ -0.31
CDC42BPA-202ENST00000366764 ZDHHC9Q9Y397 364 aa13.1□□□□□ -0.31
CDC42BPA-202ENST00000366764 PCDHA5Q9Y5H7 936 aa13.1□□□□□ -0.31
CDC42BPA-202ENST00000366764 PPP1R7Q15435 360 aa13.1□□□□□ -0.31
CDC42BPA-202ENST00000366764 ARMC9Q7Z3E5 817 aa13.1□□□□□ -0.31
CDC42BPA-202ENST00000366764 SAMM50Q9Y512 469 aa13.1□□□□□ -0.31
CDC42BPA-202ENST00000366764 RFC4P35249 363 aa13.1□□□□□ -0.31
CDC42BPA-202ENST00000366764 CCDC170Q8IYT3 715 aa13.1□□□□□ -0.31
CDC42BPA-202ENST00000366764 CEP83Q9Y592 693 aa13.1□□□□□ -0.31
CDC42BPA-202ENST00000366764 NCBP1Q09161 790 aaKnown RBP13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 SERTAD1Q9UHV2 236 aa13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 ARID4AP29374 1257 aaPredicted RBP13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 ZNF594Q96JF6 807 aaPredicted RBP13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 PHKG2P15735 406 aa13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 ATP11AP98196 1134 aa13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 HOMER2Q9NSB8 354 aa13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 NRBP1Q9UHY1 535 aa13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 SLFN14P0C7P3 912 aa13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 WDR78Q5VTH9 848 aa13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 RGS22Q8NE09 1264 aa13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 DESI2Q9BSY9 194 aa13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 ADCY7P51828 1080 aa13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 KIF23Q02241 960 aaPredicted RBP13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 PPP1R14CQ8TAE6 165 aa13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 MAST3O60307 1309 aa13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 IFNAR1P17181 557 aa13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 ZNF579Q8NAF0 562 aaKnown RBP13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 SMC6Q96SB8 1091 aa13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 SELENOSQ9BQE4 189 aa13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 ROBO2Q9HCK4 1378 aa13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 FMNL1O95466 1100 aaPredicted RBP13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 HPDP32754 393 aaPredicted RBP13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 C2CD5Q86YS7 1000 aa13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 TRMT44Q8IYL2 757 aaKnown RBP13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 ZNF589Q86UQ0 364 aaPredicted RBP13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 PNMA6AP0CW24 399 aaPredicted RBP13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 LRWD1Q9UFC0 647 aa13.09□□□□□ -0.31
CDC42BPA-202ENST00000366764 PTPRMP28827 1452 aa13.08□□□□□ -0.31
CDC42BPA-202ENST00000366764 SCG2P13521 617 aa13.08□□□□□ -0.31
CDC42BPA-202ENST00000366764 DENND2CQ68D51 928 aa13.08□□□□□ -0.31
CDC42BPA-202ENST00000366764 SND1Q7KZF4 910 aaKnown RBP eCLIP13.08□□□□□ -0.31
CDC42BPA-202ENST00000366764 PEX26Q7Z412 305 aa13.08□□□□□ -0.31
CDC42BPA-202ENST00000366764 EFCAB13Q8IY85 973 aa13.08□□□□□ -0.31
CDC42BPA-202ENST00000366764 SCLT1Q96NL6 688 aa13.08□□□□□ -0.31
CDC42BPA-202ENST00000366764 STK36Q9NRP7 1315 aa13.08□□□□□ -0.32
CDC42BPA-202ENST00000366764 LONRF2Q1L5Z9 754 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms