RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 RBM26Q5T8P6 1007 aaKnown RBP24.31■■□□□ 1.48
MAP1LC3A-201ENST00000360668 OTUD7BQ6GQQ9 843 aa24.31■■□□□ 1.48
MAP1LC3A-201ENST00000360668 LZTS2Q9BRK4 669 aa24.31■■□□□ 1.48
MAP1LC3A-201ENST00000360668 RBM27Q9P2N5 1060 aaKnown RBP24.31■■□□□ 1.48
MAP1LC3A-201ENST00000360668 PGAP2Q9UHJ9 254 aa24.31■■□□□ 1.48
MAP1LC3A-201ENST00000360668 CNPY2Q9Y2B0 182 aa24.31■■□□□ 1.48
MAP1LC3A-201ENST00000360668 PALM3A6NDB9 673 aaPredicted RBP24.3■■□□□ 1.48
MAP1LC3A-201ENST00000360668 KIF4BQ2VIQ3 1234 aa24.3■■□□□ 1.48
MAP1LC3A-201ENST00000360668 KRT40Q6A162 431 aa24.3■■□□□ 1.48
MAP1LC3A-201ENST00000360668 TMEM179Q6ZVK1 233 aa24.3■■□□□ 1.48
MAP1LC3A-201ENST00000360668 SAMD7Q7Z3H4 446 aa24.3■■□□□ 1.48
MAP1LC3A-201ENST00000360668 TMEM39BQ9GZU3 492 aa24.3■■□□□ 1.48
MAP1LC3A-201ENST00000360668 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.3■■□□□ 1.48
MAP1LC3A-201ENST00000360668 MYH15Q9Y2K3 1946 aa24.29■■□□□ 1.48
MAP1LC3A-201ENST00000360668 UBE2Q2LH0YL09 131 aa24.29■■□□□ 1.48
MAP1LC3A-201ENST00000360668 DEKP35659 375 aaKnown RBP24.29■■□□□ 1.48
MAP1LC3A-201ENST00000360668 ABCB5Q2M3G0 1257 aa24.29■■□□□ 1.48
MAP1LC3A-201ENST00000360668 TBC1D10BQ4KMP7 808 aaPredicted RBP24.29■■□□□ 1.48
MAP1LC3A-201ENST00000360668 KANSL2Q9H9L4 492 aa24.29■■□□□ 1.48
MAP1LC3A-201ENST00000360668 GPRC5DQ9NZD1 345 aa24.29■■□□□ 1.48
MAP1LC3A-201ENST00000360668 CLIP2Q9UDT6 1046 aa24.29■■□□□ 1.48
MAP1LC3A-201ENST00000360668 NCLP19338 710 aaKnown RBP24.29■■□□□ 1.48
MAP1LC3A-201ENST00000360668 PKN1Q16512 942 aa24.29■■□□□ 1.48
MAP1LC3A-201ENST00000360668 ATL3Q6DD88 541 aa24.29■■□□□ 1.48
MAP1LC3A-201ENST00000360668 BRAPQ7Z569 592 aa24.29■■□□□ 1.48
MAP1LC3A-201ENST00000360668 GJB4Q9NTQ9 266 aa24.29■■□□□ 1.48
MAP1LC3A-201ENST00000360668 NYAP2Q9P242 653 aa24.29■■□□□ 1.48
MAP1LC3A-201ENST00000360668 V9GY48 417 aaPredicted RBP24.29■■□□□ 1.48
MAP1LC3A-201ENST00000360668 PARP1P09874 1014 aaKnown RBP24.28■■□□□ 1.48
MAP1LC3A-201ENST00000360668 KIF23Q02241 960 aaPredicted RBP24.28■■□□□ 1.48
MAP1LC3A-201ENST00000360668 FAM173BQ6P4H8 233 aa24.28■■□□□ 1.48
MAP1LC3A-201ENST00000360668 USP48Q86UV5 1035 aa24.28■■□□□ 1.48
MAP1LC3A-201ENST00000360668 STAG2Q8N3U4 1231 aa24.28■■□□□ 1.48
MAP1LC3A-201ENST00000360668 MKL1Q969V6 931 aa24.28■■□□□ 1.48
MAP1LC3A-201ENST00000360668 ZC3H4Q9UPT8 1303 aaKnown RBP24.27■■□□□ 1.48
MAP1LC3A-201ENST00000360668 MYH4Q9Y623 1939 aa24.27■■□□□ 1.48
MAP1LC3A-201ENST00000360668 XBP1P17861 261 aa24.27■■□□□ 1.48
MAP1LC3A-201ENST00000360668 SMARCA1P28370 1054 aa24.27■■□□□ 1.48
MAP1LC3A-201ENST00000360668 MAP3K10Q02779 954 aa24.27■■□□□ 1.48
MAP1LC3A-201ENST00000360668 RASA3Q14644 834 aa24.27■■□□□ 1.48
MAP1LC3A-201ENST00000360668 CABP5Q9NP86 173 aa24.27■■□□□ 1.48
MAP1LC3A-201ENST00000360668 SNHG28P0DPA3 235 aa24.26■■□□□ 1.47
MAP1LC3A-201ENST00000360668 KLHL40Q2TBA0 621 aa24.26■■□□□ 1.47
MAP1LC3A-201ENST00000360668 CLEC10AQ8IUN9 316 aa24.26■■□□□ 1.47
MAP1LC3A-201ENST00000360668 LRRC47Q8N1G4 583 aaKnown RBP24.26■■□□□ 1.47
MAP1LC3A-201ENST00000360668 SCAND2PQ9GZW5 306 aaPredicted RBP24.26■■□□□ 1.47
MAP1LC3A-201ENST00000360668 GDPD2Q9HCC8 539 aa24.26■■□□□ 1.47
MAP1LC3A-201ENST00000360668 FIBPO43427 364 aa24.25■■□□□ 1.47
MAP1LC3A-201ENST00000360668 GDF11O95390 407 aa24.25■■□□□ 1.47
MAP1LC3A-201ENST00000360668 MMP1P03956 469 aa24.25■■□□□ 1.47
MAP1LC3A-201ENST00000360668 PDHBP11177 359 aa24.25■■□□□ 1.47
MAP1LC3A-201ENST00000360668 ZNF396Q96N95 335 aaPredicted RBP24.25■■□□□ 1.47
MAP1LC3A-201ENST00000360668 SPZ1Q9BXG8 430 aa24.25■■□□□ 1.47
MAP1LC3A-201ENST00000360668 HACL1Q9UJ83 578 aa24.25■■□□□ 1.47
MAP1LC3A-201ENST00000360668 CFAP45Q9UL16 551 aa24.25■■□□□ 1.47
MAP1LC3A-201ENST00000360668 MTMR7Q9Y216 660 aa24.25■■□□□ 1.47
MAP1LC3A-201ENST00000360668 KLRF2D3W0D1 207 aa24.25■■□□□ 1.47
MAP1LC3A-201ENST00000360668 RRP1BQ14684 758 aaKnown RBP24.25■■□□□ 1.47
MAP1LC3A-201ENST00000360668 SEPT2Q15019 361 aa24.25■■□□□ 1.47
MAP1LC3A-201ENST00000360668 SAFBQ15424 915 aaKnown RBP eCLIP24.25■■□□□ 1.47
MAP1LC3A-201ENST00000360668 PFKFB3Q16875 520 aaPredicted RBP24.25■■□□□ 1.47
MAP1LC3A-201ENST00000360668 ASPRV1Q53RT3 343 aa24.25■■□□□ 1.47
MAP1LC3A-201ENST00000360668 DDX49Q9Y6V7 483 aaKnown RBP24.25■■□□□ 1.47
MAP1LC3A-201ENST00000360668 ELP1O95163 1332 aa24.24■■□□□ 1.47
MAP1LC3A-201ENST00000360668 USP17L5A8MUK1 530 aa24.24■■□□□ 1.47
MAP1LC3A-201ENST00000360668 SCG2P13521 617 aa24.24■■□□□ 1.47
MAP1LC3A-201ENST00000360668 EEF2P13639 858 aaKnown RBP24.24■■□□□ 1.47
MAP1LC3A-201ENST00000360668 U2AF2P26368 475 aaKnown RBP eCLIP24.24■■□□□ 1.47
MAP1LC3A-201ENST00000360668 C1QTNF8P60827 252 aa24.24■■□□□ 1.47
MAP1LC3A-201ENST00000360668 ICA1Q05084 483 aa24.24■■□□□ 1.47
MAP1LC3A-201ENST00000360668 USP17L2Q6R6M4 530 aa24.24■■□□□ 1.47
MAP1LC3A-201ENST00000360668 CDAN1Q8IWY9 1227 aa24.24■■□□□ 1.47
MAP1LC3A-201ENST00000360668 TEPSINQ96N21 525 aa24.24■■□□□ 1.47
MAP1LC3A-201ENST00000360668 KIF28PB7ZC32 967 aa24.23■■□□□ 1.47
MAP1LC3A-201ENST00000360668 KIF3CO14782 793 aa24.23■■□□□ 1.47
MAP1LC3A-201ENST00000360668 GH2P01242 217 aa24.23■■□□□ 1.47
MAP1LC3A-201ENST00000360668 ATP2B2Q01814 1243 aa24.23■■□□□ 1.47
MAP1LC3A-201ENST00000360668 SHROOM1Q2M3G4 852 aaPredicted RBP24.23■■□□□ 1.47
MAP1LC3A-201ENST00000360668 SYNPO2Q9UMS6 1093 aa24.23■■□□□ 1.47
MAP1LC3A-201ENST00000360668 hCG_1642624A0A1W2PR95 340 aa24.22■■□□□ 1.47
MAP1LC3A-201ENST00000360668 MBD3O95983 291 aa24.22■■□□□ 1.47
MAP1LC3A-201ENST00000360668 GOLGA8HP0CJ92 632 aa24.22■■□□□ 1.47
MAP1LC3A-201ENST00000360668 APOBEC3FQ8IUX4 373 aaKnown RBP24.22■■□□□ 1.47
MAP1LC3A-201ENST00000360668 TRPM4Q8TD43 1214 aa24.22■■□□□ 1.47
MAP1LC3A-201ENST00000360668 NMRK2Q9NPI5 230 aa24.22■■□□□ 1.47
MAP1LC3A-201ENST00000360668 ASTN2O75129 1339 aaPredicted RBP24.22■■□□□ 1.47
MAP1LC3A-201ENST00000360668 CYTH3O43739 400 aa24.21■■□□□ 1.47
MAP1LC3A-201ENST00000360668 JAG1P78504 1218 aa24.21■■□□□ 1.47
MAP1LC3A-201ENST00000360668 GNL2Q13823 731 aaKnown RBP24.21■■□□□ 1.47
MAP1LC3A-201ENST00000360668 SLC35G1Q2M3R5 365 aa24.21■■□□□ 1.47
MAP1LC3A-201ENST00000360668 RASGRP2Q7LDG7 609 aa24.21■■□□□ 1.47
MAP1LC3A-201ENST00000360668 SIAH1Q8IUQ4 282 aa24.21■■□□□ 1.47
MAP1LC3A-201ENST00000360668 PHF20Q9BVI0 1012 aa24.21■■□□□ 1.47
MAP1LC3A-201ENST00000360668 FOXP1Q9H334 677 aaPredicted RBP24.21■■□□□ 1.47
MAP1LC3A-201ENST00000360668 TFIP11Q9UBB9 837 aaKnown RBP24.21■■□□□ 1.47
MAP1LC3A-201ENST00000360668 KCNJ14Q9UNX9 436 aa24.21■■□□□ 1.47
MAP1LC3A-201ENST00000360668 DDNO94850 711 aaPredicted RBP24.2■■□□□ 1.47
MAP1LC3A-201ENST00000360668 EPS15P42566 896 aa24.2■■□□□ 1.47
MAP1LC3A-201ENST00000360668 UBE2HP62256 183 aa24.2■■□□□ 1.47
MAP1LC3A-201ENST00000360668 ZNF543Q08ER8 600 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms