RNA–Protein interactions for RNA: ENST00000358598.6

PRKAR1A-201, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1A, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-201ENST00000358598 MNS1Q8NEH6 495 aa12.46□□□□□ -0.41
PRKAR1A-201ENST00000358598 ITGB4P16144 1822 aa12.46□□□□□ -0.42
PRKAR1A-201ENST00000358598 PLCD1P51178 756 aa12.46□□□□□ -0.42
PRKAR1A-201ENST00000358598 GPSM2P81274 684 aa12.46□□□□□ -0.42
PRKAR1A-201ENST00000358598 RC3H1Q5TC82 1133 aaKnown RBP12.46□□□□□ -0.42
PRKAR1A-201ENST00000358598 SAMD1Q6SPF0 538 aaPredicted RBP12.46□□□□□ -0.42
PRKAR1A-201ENST00000358598 BLIDQ8IZY5 108 aa12.46□□□□□ -0.42
PRKAR1A-201ENST00000358598 FERMT2Q96AC1 680 aa12.46□□□□□ -0.42
PRKAR1A-201ENST00000358598 PCMTD1Q96MG8 357 aaPredicted RBP12.46□□□□□ -0.42
PRKAR1A-201ENST00000358598 UIMC1Q96RL1 719 aa12.46□□□□□ -0.42
PRKAR1A-201ENST00000358598 EYA3Q99504 573 aa12.46□□□□□ -0.42
PRKAR1A-201ENST00000358598 PHF20Q9BVI0 1012 aa12.46□□□□□ -0.42
PRKAR1A-201ENST00000358598 UBA5Q9GZZ9 404 aa12.46□□□□□ -0.42
PRKAR1A-201ENST00000358598 CTNND2Q9UQB3 1225 aa12.46□□□□□ -0.42
PRKAR1A-201ENST00000358598 LEMD3Q9Y2U8 911 aa12.46□□□□□ -0.42
PRKAR1A-201ENST00000358598 SPEF2Q9C093 1822 aa12.46□□□□□ -0.42
PRKAR1A-201ENST00000358598 PCP11498 1178 aaKnown RBP12.45□□□□□ -0.42
PRKAR1A-201ENST00000358598 ZSCAN29Q8IWY8 852 aaPredicted RBP12.45□□□□□ -0.42
PRKAR1A-201ENST00000358598 BPIFA3Q9BQP9 254 aa12.45□□□□□ -0.42
PRKAR1A-201ENST00000358598 MTA3Q9BTC8 594 aa12.45□□□□□ -0.42
PRKAR1A-201ENST00000358598 NUP98P52948 1817 aa12.45□□□□□ -0.42
PRKAR1A-201ENST00000358598 KLRF2D3W0D1 207 aa12.45□□□□□ -0.42
PRKAR1A-201ENST00000358598 WNT7AO00755 349 aa12.45□□□□□ -0.42
PRKAR1A-201ENST00000358598 PRR5LQ6MZQ0 368 aa12.45□□□□□ -0.42
PRKAR1A-201ENST00000358598 USP17L2Q6R6M4 530 aa12.45□□□□□ -0.42
PRKAR1A-201ENST00000358598 RASGRP2Q7LDG7 609 aa12.45□□□□□ -0.42
PRKAR1A-201ENST00000358598 RBM17Q96I25 401 aaKnown RBP12.45□□□□□ -0.42
PRKAR1A-201ENST00000358598 N4BP3O15049 544 aa12.45□□□□□ -0.42
PRKAR1A-201ENST00000358598 GNAQP50148 359 aa12.45□□□□□ -0.42
PRKAR1A-201ENST00000358598 KARSQ15046 597 aaKnown RBP12.45□□□□□ -0.42
PRKAR1A-201ENST00000358598 DTHD1Q6ZMT9 781 aa12.45□□□□□ -0.42
PRKAR1A-201ENST00000358598 ZNF215Q9UL58 517 aaPredicted RBP12.45□□□□□ -0.42
PRKAR1A-201ENST00000358598 SLIT2O94813 1529 aa12.45□□□□□ -0.42
PRKAR1A-201ENST00000358598 ORC4O43929 436 aa12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 SCNN1DP51172 638 aa12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 DOK7Q18PE1 504 aa12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 C12orf60Q5U649 245 aa12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 PAGE5Q96GU1 130 aa12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 GJD4Q96KN9 370 aaPredicted RBP12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 ZC3H12CQ9C0D7 883 aaKnown RBP12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 CD209Q9NNX6 404 aa12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 SYNRGQ9UMZ2 1314 aa12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 TULP1O00294 542 aaPredicted RBP12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 SLFN14P0C7P3 912 aa12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 BMP6P22004 513 aa12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 GNG11P61952 73 aa12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 JAKMIP3Q5VZ66 844 aa12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 ZNF622Q969S3 477 aaKnown RBP eCLIP12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 BAG1Q99933 345 aaPredicted RBP12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 DESI2Q9BSY9 194 aa12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 VPS16Q9H269 839 aa12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 CNTNAP5Q8WYK1 1306 aa12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 COL1A1P02452 1464 aaPredicted RBP12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 PARP1P09874 1014 aaKnown RBP12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 RCAN1P53805 252 aa12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 PPP1R13BQ96KQ4 1090 aa12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 OSBPL5Q9H0X9 879 aaPredicted RBP12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 GPCPD1Q9NPB8 672 aa12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 LAMA4Q16363 1823 aa12.44□□□□□ -0.42
PRKAR1A-201ENST00000358598 FRMPD2Q68DX3 1309 aaPredicted RBP12.43□□□□□ -0.42
PRKAR1A-201ENST00000358598 CCDC96Q2M329 555 aa12.43□□□□□ -0.42
PRKAR1A-201ENST00000358598 CCDC148Q8NFR7 591 aa12.43□□□□□ -0.42
PRKAR1A-201ENST00000358598 PP2D1A8MPX8 630 aa12.43□□□□□ -0.42
PRKAR1A-201ENST00000358598 IKQ13123 557 aaPredicted RBP12.43□□□□□ -0.42
PRKAR1A-201ENST00000358598 PFKFB3Q16875 520 aaPredicted RBP12.43□□□□□ -0.42
PRKAR1A-201ENST00000358598 LRRC47Q8N1G4 583 aaKnown RBP12.43□□□□□ -0.42
PRKAR1A-201ENST00000358598 TMEM47Q9BQJ4 181 aa12.43□□□□□ -0.42
PRKAR1A-201ENST00000358598 TRIM34Q9BYJ4 488 aa12.43□□□□□ -0.42
PRKAR1A-201ENST00000358598 AKAP11Q9UKA4 1901 aa12.43□□□□□ -0.42
PRKAR1A-201ENST00000358598 AFF2P51816 1311 aa12.43□□□□□ -0.42
PRKAR1A-201ENST00000358598 A0A087X0B3 334 aa12.43□□□□□ -0.42
PRKAR1A-201ENST00000358598 KIF2AO00139 706 aaPredicted RBP12.43□□□□□ -0.42
PRKAR1A-201ENST00000358598 CCP110O43303 1012 aa12.43□□□□□ -0.42
PRKAR1A-201ENST00000358598 ZSCAN12O43309 604 aa12.43□□□□□ -0.42
PRKAR1A-201ENST00000358598 CCNT1O60563 726 aaKnown RBP12.43□□□□□ -0.42
PRKAR1A-201ENST00000358598 E4F1Q66K89 784 aaPredicted RBP12.43□□□□□ -0.42
PRKAR1A-201ENST00000358598 SPECC1LQ69YQ0 1117 aa12.43□□□□□ -0.42
PRKAR1A-201ENST00000358598 VSTM4Q8IW00 320 aa12.43□□□□□ -0.42
PRKAR1A-201ENST00000358598 TCP11L1Q9NUJ3 509 aa12.43□□□□□ -0.42
PRKAR1A-201ENST00000358598 DOT1LQ8TEK3 1739 aa12.42□□□□□ -0.42
PRKAR1A-201ENST00000358598 ACTN4O43707 911 aaKnown RBP12.42□□□□□ -0.42
PRKAR1A-201ENST00000358598 SLF2Q8IX21 1173 aa12.42□□□□□ -0.42
PRKAR1A-201ENST00000358598 IGSF22Q8N9C0 903 aa12.42□□□□□ -0.42
PRKAR1A-201ENST00000358598 ZNF579Q8NAF0 562 aaKnown RBP12.42□□□□□ -0.42
PRKAR1A-201ENST00000358598 CDK5RAP3Q96JB5 506 aa12.42□□□□□ -0.42
PRKAR1A-201ENST00000358598 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.42□□□□□ -0.42
PRKAR1A-201ENST00000358598 SHANK3Q9BYB0 1731 aa12.42□□□□□ -0.42
PRKAR1A-201ENST00000358598 MYO5AQ9Y4I1 1855 aaKnown RBP12.42□□□□□ -0.42
PRKAR1A-201ENST00000358598 PAPPAQ13219 1627 aa12.42□□□□□ -0.42
PRKAR1A-201ENST00000358598 SSBP05455 408 aaKnown RBP eCLIP12.42□□□□□ -0.42
PRKAR1A-201ENST00000358598 CDK8P49336 464 aa12.42□□□□□ -0.42
PRKAR1A-201ENST00000358598 CCDC178Q5BJE1 867 aa12.42□□□□□ -0.42
PRKAR1A-201ENST00000358598 MSL1Q68DK7 614 aa12.42□□□□□ -0.42
PRKAR1A-201ENST00000358598 CLEC10AQ8IUN9 316 aa12.42□□□□□ -0.42
PRKAR1A-201ENST00000358598 RRP36Q96EU6 259 aaKnown RBP12.42□□□□□ -0.42
PRKAR1A-201ENST00000358598 NUP88Q99567 741 aaPredicted RBP12.42□□□□□ -0.42
PRKAR1A-201ENST00000358598 ZSWIM4Q9H7M6 989 aa12.42□□□□□ -0.42
PRKAR1A-201ENST00000358598 LZTFL1Q9NQ48 299 aa12.42□□□□□ -0.42
PRKAR1A-201ENST00000358598 LRRC4BQ9NT99 713 aa12.42□□□□□ -0.42
PRKAR1A-201ENST00000358598 BIN2Q9UBW5 565 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms