RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 DALRD3Q5D0E6 543 aaKnown RBP13.95□□□□□ -0.18
PCDHB11-201ENST00000354757 RC3H1Q5TC82 1133 aaKnown RBP13.95□□□□□ -0.18
PCDHB11-201ENST00000354757 TBC1D16Q8TBP0 767 aa13.95□□□□□ -0.18
PCDHB11-201ENST00000354757 BICD1Q96G01 975 aa13.95□□□□□ -0.18
PCDHB11-201ENST00000354757 PCDHA1Q9Y5I3 950 aa13.95□□□□□ -0.18
PCDHB11-201ENST00000354757 COBLO75128 1261 aa13.94□□□□□ -0.18
PCDHB11-201ENST00000354757 TECP42680 631 aa13.94□□□□□ -0.18
PCDHB11-201ENST00000354757 NDUFA8P51970 172 aa13.94□□□□□ -0.18
PCDHB11-201ENST00000354757 ZNF445P59923 1031 aa13.94□□□□□ -0.18
PCDHB11-201ENST00000354757 TBC1D10BQ4KMP7 808 aaPredicted RBP13.94□□□□□ -0.18
PCDHB11-201ENST00000354757 PAGR1Q9BTK6 254 aa13.94□□□□□ -0.18
PCDHB11-201ENST00000354757 CBX8Q9HC52 389 aa13.94□□□□□ -0.18
PCDHB11-201ENST00000354757 KIF13AQ9H1H9 1805 aa13.94□□□□□ -0.18
PCDHB11-201ENST00000354757 ECE2O60344 883 aa13.94□□□□□ -0.18
PCDHB11-201ENST00000354757 CUTAO60888 179 aa13.94□□□□□ -0.18
PCDHB11-201ENST00000354757 ZNF397Q8NF99 534 aaPredicted RBP13.94□□□□□ -0.18
PCDHB11-201ENST00000354757 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.94□□□□□ -0.18
PCDHB11-201ENST00000354757 PIGSQ96S52 555 aa13.94□□□□□ -0.18
PCDHB11-201ENST00000354757 CAMTA1Q9Y6Y1 1673 aa13.94□□□□□ -0.18
PCDHB11-201ENST00000354757 WWC2Q6AWC2 1192 aa13.94□□□□□ -0.18
PCDHB11-201ENST00000354757 UTYO14607 1347 aa13.94□□□□□ -0.18
PCDHB11-201ENST00000354757 YEATS4O95619 227 aa13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 GYS1P13807 737 aa13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 SSR1P43307 286 aaKnown RBP13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 CRKP46108 304 aa13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 PDE4DQ08499 809 aa13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 TRAF1Q13077 416 aa13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 PPP2R5BQ15173 497 aa13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 UVSSAQ2YD98 709 aa13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 ATL3Q6DD88 541 aa13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 ZBTB9Q96C00 473 aa13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 TCHPQ9BT92 498 aa13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 VPS16Q9H269 839 aa13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 PSTPIP2Q9H939 334 aa13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 RMND1Q9NWS8 449 aa13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 TTC14Q96N46 770 aa13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 TMOD4Q9NZQ9 345 aa13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 PIM2Q9P1W9 311 aa13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 CALCRLQ16602 461 aa13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 TMC4Q7Z404 712 aa13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 PYM1Q9BRP8 204 aaKnown RBP13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 FLOT1O75955 427 aa13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 CAVIN2O95810 425 aa13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 CDC27P30260 824 aa13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 PRR16Q569H4 304 aa13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 PPP4R3AQ6IN85 833 aa13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 COL23A1Q86Y22 540 aaPredicted RBP13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 ENAHQ8N8S7 591 aaPredicted RBP13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 NSUN4Q96CB9 384 aaKnown RBP13.93□□□□□ -0.18
PCDHB11-201ENST00000354757 NEMFO60524 1076 aa13.92□□□□□ -0.18
PCDHB11-201ENST00000354757 KIF20AO95235 890 aa13.92□□□□□ -0.18
PCDHB11-201ENST00000354757 KIF4BQ2VIQ3 1234 aa13.92□□□□□ -0.18
PCDHB11-201ENST00000354757 ADALQ6DHV7 355 aa13.92□□□□□ -0.18
PCDHB11-201ENST00000354757 CTR9Q6PD62 1173 aa13.92□□□□□ -0.18
PCDHB11-201ENST00000354757 KRT25Q7Z3Z0 450 aa13.92□□□□□ -0.18
PCDHB11-201ENST00000354757 GINS2Q9Y248 185 aa13.92□□□□□ -0.18
PCDHB11-201ENST00000354757 GH2P01242 217 aa13.92□□□□□ -0.18
PCDHB11-201ENST00000354757 MYL5Q02045 173 aa13.92□□□□□ -0.18
PCDHB11-201ENST00000354757 KIF23Q02241 960 aaPredicted RBP13.92□□□□□ -0.18
PCDHB11-201ENST00000354757 TNFAIP1Q13829 316 aa13.92□□□□□ -0.18
PCDHB11-201ENST00000354757 SPA17Q15506 151 aa13.92□□□□□ -0.18
PCDHB11-201ENST00000354757 PTPN21Q16825 1174 aa13.92□□□□□ -0.18
PCDHB11-201ENST00000354757 TAOK3Q9H2K8 898 aa13.92□□□□□ -0.18
PCDHB11-201ENST00000354757 SENP2Q9HC62 589 aa13.92□□□□□ -0.18
PCDHB11-201ENST00000354757 CTNND2Q9UQB3 1225 aa13.92□□□□□ -0.18
PCDHB11-201ENST00000354757 CCP110O43303 1012 aa13.92□□□□□ -0.18
PCDHB11-201ENST00000354757 CYP4A11Q02928 519 aa13.92□□□□□ -0.18
PCDHB11-201ENST00000354757 CCDC181Q5TID7 509 aa13.92□□□□□ -0.18
PCDHB11-201ENST00000354757 GRAMD1CQ8IYS0 662 aa13.92□□□□□ -0.18
PCDHB11-201ENST00000354757 BCL9O00512 1426 aa13.92□□□□□ -0.18
PCDHB11-201ENST00000354757 IFNAR1P17181 557 aa13.91□□□□□ -0.18
PCDHB11-201ENST00000354757 NFE2L3Q9Y4A8 694 aa13.91□□□□□ -0.18
PCDHB11-201ENST00000354757 FAM13AO94988 1023 aa13.91□□□□□ -0.18
PCDHB11-201ENST00000354757 FGFR1OPO95684 399 aaKnown RBP13.91□□□□□ -0.18
PCDHB11-201ENST00000354757 CIAPIN1Q6FI81 312 aa13.91□□□□□ -0.18
PCDHB11-201ENST00000354757 SV2BQ7L1I2 683 aa13.91□□□□□ -0.18
PCDHB11-201ENST00000354757 NELFCDQ8IXH7 590 aa13.91□□□□□ -0.18
PCDHB11-201ENST00000354757 RNF216Q9NWF9 866 aaPredicted RBP13.91□□□□□ -0.18
PCDHB11-201ENST00000354757 HARSP12081 509 aaKnown RBP13.91□□□□□ -0.18
PCDHB11-201ENST00000354757 U2AF2P26368 475 aaKnown RBP eCLIP13.91□□□□□ -0.18
PCDHB11-201ENST00000354757 TERF1P54274 439 aa13.91□□□□□ -0.18
PCDHB11-201ENST00000354757 MB21D2Q8IYB1 491 aaPredicted RBP13.91□□□□□ -0.18
PCDHB11-201ENST00000354757 SPAG5Q96R06 1193 aa13.91□□□□□ -0.18
PCDHB11-201ENST00000354757 AKR1B10O60218 316 aa13.9□□□□□ -0.18
PCDHB11-201ENST00000354757 ZNF500O60304 480 aaPredicted RBP13.9□□□□□ -0.18
PCDHB11-201ENST00000354757 TTLL1O95922 423 aa13.9□□□□□ -0.18
PCDHB11-201ENST00000354757 LIFRP42702 1097 aa13.9□□□□□ -0.18
PCDHB11-201ENST00000354757 POSTNQ15063 836 aa13.9□□□□□ -0.18
PCDHB11-201ENST00000354757 SULF1Q8IWU6 871 aa13.9□□□□□ -0.18
PCDHB11-201ENST00000354757 DRC1Q96MC2 740 aa13.9□□□□□ -0.18
PCDHB11-201ENST00000354757 LUC7LQ9NQ29 371 aaKnown RBP13.9□□□□□ -0.18
PCDHB11-201ENST00000354757 CNTNAP4Q9C0A0 1308 aa13.9□□□□□ -0.18
PCDHB11-201ENST00000354757 TRAF5O00463 557 aa13.9□□□□□ -0.18
PCDHB11-201ENST00000354757 DDAH1O94760 285 aa13.9□□□□□ -0.18
PCDHB11-201ENST00000354757 MKRN3Q13064 507 aaKnown RBP13.9□□□□□ -0.18
PCDHB11-201ENST00000354757 PODNQ7Z5L7 613 aa13.9□□□□□ -0.18
PCDHB11-201ENST00000354757 RNF26Q9BY78 433 aaPredicted RBP13.9□□□□□ -0.18
PCDHB11-201ENST00000354757 PI4KBQ9UBF8 816 aa13.9□□□□□ -0.18
PCDHB11-201ENST00000354757 ZDHHC9Q9Y397 364 aa13.9□□□□□ -0.18
PCDHB11-201ENST00000354757 PCDHB6Q9Y5E3 794 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms