RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 CALM1P0DP23 149 aa11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 CALM2P0DP24 149 aa11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 CALM3P0DP25 149 aa11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 NPR1P16066 1061 aa11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 CMA1P23946 247 aa11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 PDE6BP35913 854 aa11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 ZNF75DP51815 510 aa11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 TPM4P67936 248 aa11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 PKN1Q16512 942 aa11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 SOGA3Q5TF21 947 aa11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 TSC1Q92574 1164 aa11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 SHISA4Q96DD7 197 aa11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 PCDHA5Q9Y5H7 936 aa11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 C4BP0C0L5 1744 aa11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 PPIP5K2O43314 1243 aa11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 ATP1A3P13637 1013 aa11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 AKR1B1P15121 316 aa11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 RASA1P20936 1047 aa11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 KCTD1Q719H9 257 aa11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 DDX4Q9NQI0 724 aaKnown RBP11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 STK32BQ9NY57 414 aa11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 BIN2Q9UBW5 565 aaPredicted RBP11.63□□□□□ -0.55
RBFOX1-202ENST00000340209 PARP1P09874 1014 aaKnown RBP11.62□□□□□ -0.55
RBFOX1-202ENST00000340209 TPD52L1Q16890 204 aaPredicted RBP11.62□□□□□ -0.55
RBFOX1-202ENST00000340209 ATL3Q6DD88 541 aa11.62□□□□□ -0.55
RBFOX1-202ENST00000340209 SLF2Q8IX21 1173 aa11.62□□□□□ -0.55
RBFOX1-202ENST00000340209 COA7Q96BR5 231 aa11.62□□□□□ -0.55
RBFOX1-202ENST00000340209 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.62□□□□□ -0.55
RBFOX1-202ENST00000340209 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.62□□□□□ -0.55
RBFOX1-202ENST00000340209 ATP6V0A2Q9Y487 856 aa11.62□□□□□ -0.55
RBFOX1-202ENST00000340209 TNRC6CQ9HCJ0 1690 aaKnown RBP11.62□□□□□ -0.55
RBFOX1-202ENST00000340209 PP2D1A8MPX8 630 aa11.62□□□□□ -0.55
RBFOX1-202ENST00000340209 ZFPM1Q8IX07 1006 aa11.62□□□□□ -0.55
RBFOX1-202ENST00000340209 PIGSQ96S52 555 aa11.62□□□□□ -0.55
RBFOX1-202ENST00000340209 ANAPC4Q9UJX5 808 aa11.62□□□□□ -0.55
RBFOX1-202ENST00000340209 CNTNAP5Q8WYK1 1306 aa11.62□□□□□ -0.55
RBFOX1-202ENST00000340209 ONECUT3O60422 494 aaPredicted RBP11.62□□□□□ -0.55
RBFOX1-202ENST00000340209 ALDH1B1P30837 517 aa11.62□□□□□ -0.55
RBFOX1-202ENST00000340209 PTPAQ15257 358 aa11.62□□□□□ -0.55
RBFOX1-202ENST00000340209 CRY2Q49AN0 593 aa11.62□□□□□ -0.55
RBFOX1-202ENST00000340209 RCSD1Q6JBY9 416 aa11.62□□□□□ -0.55
RBFOX1-202ENST00000340209 FBXL16Q8N461 479 aa11.62□□□□□ -0.55
RBFOX1-202ENST00000340209 SYMPKQ92797 1274 aaKnown RBP11.62□□□□□ -0.55
RBFOX1-202ENST00000340209 TEKT1Q969V4 418 aa11.62□□□□□ -0.55
RBFOX1-202ENST00000340209 CUTAO60888 179 aa11.61□□□□□ -0.55
RBFOX1-202ENST00000340209 DDAH1O94760 285 aa11.61□□□□□ -0.55
RBFOX1-202ENST00000340209 ZBTB7AO95365 584 aa11.61□□□□□ -0.55
RBFOX1-202ENST00000340209 TAL1P17542 331 aaPredicted RBP11.61□□□□□ -0.55
RBFOX1-202ENST00000340209 U2AF2P26368 475 aaKnown RBP eCLIP11.61□□□□□ -0.55
RBFOX1-202ENST00000340209 ZNF287Q9HBT7 754 aa11.61□□□□□ -0.55
RBFOX1-202ENST00000340209 CEP131Q9UPN4 1083 aa11.61□□□□□ -0.55
RBFOX1-202ENST00000340209 ATF5Q9Y2D1 282 aaPredicted RBP11.61□□□□□ -0.55
RBFOX1-202ENST00000340209 A0A1W2PQ27 194 aa11.61□□□□□ -0.55
RBFOX1-202ENST00000340209 A0A1W2PQ64 194 aa11.61□□□□□ -0.55
RBFOX1-202ENST00000340209 A0A1W2PQD8 194 aa11.61□□□□□ -0.55
RBFOX1-202ENST00000340209 TCP10L2B9ZVM9 353 aa11.61□□□□□ -0.55
RBFOX1-202ENST00000340209 SPICE1Q8N0Z3 855 aa11.61□□□□□ -0.55
RBFOX1-202ENST00000340209 TBC1D22AQ8WUA7 517 aa11.61□□□□□ -0.55
RBFOX1-202ENST00000340209 SMARCE1Q969G3 411 aa11.61□□□□□ -0.55
RBFOX1-202ENST00000340209 MASTLQ96GX5 879 aa11.61□□□□□ -0.55
RBFOX1-202ENST00000340209 TMX1Q9H3N1 280 aa11.61□□□□□ -0.55
RBFOX1-202ENST00000340209 TDRD3Q9H7E2 651 aaKnown RBP11.61□□□□□ -0.55
RBFOX1-202ENST00000340209 TNNI2P48788 182 aa11.61□□□□□ -0.55
RBFOX1-202ENST00000340209 CCDC144BQ3MJ40 725 aa11.61□□□□□ -0.55
RBFOX1-202ENST00000340209 SP8Q8IXZ3 490 aa11.61□□□□□ -0.55
RBFOX1-202ENST00000340209 MAP3K14Q99558 947 aa11.61□□□□□ -0.55
RBFOX1-202ENST00000340209 PRPF3O43395 683 aaKnown RBP11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 ORC4O43929 436 aa11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 PLCG2P16885 1265 aa11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 KRBA2Q6ZNG9 492 aa11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 FAM177A1Q8N128 213 aaPredicted RBP11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 FOXP1Q9H334 677 aaPredicted RBP11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 ZBTB12Q9Y330 459 aaPredicted RBP11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 LRP5O75197 1615 aa11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 ECE2O60344 883 aa11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 HLA-DOAP06340 250 aa11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 TYW1BQ6NUM6 668 aa11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 CRAMP1Q96RY5 1269 aa11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 FAM205AQ6ZU69 1335 aa11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 ERCC3P19447 782 aa11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 WWC2Q6AWC2 1192 aa11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 METTL16Q86W50 562 aaKnown RBP11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 BLIDQ8IZY5 108 aa11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 XPO4Q9C0E2 1151 aaKnown RBP11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 ZNF277Q9NRM2 450 aaPredicted RBP11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 HOOK1Q9UJC3 728 aaKnown RBP11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 STK36Q9NRP7 1315 aa11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 SSBP05455 408 aaKnown RBP eCLIP11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 NOLC1Q14978 699 aaKnown RBP eCLIP11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 POSTNQ15063 836 aa11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 TTBK2Q6IQ55 1244 aa11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 POTEAQ6S8J7 498 aa11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 CPLX3Q8WVH0 158 aa11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 NUP88Q99567 741 aaPredicted RBP11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 COA1Q9GZY4 146 aa11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 TMEM260Q9NX78 707 aa11.6□□□□□ -0.55
RBFOX1-202ENST00000340209 COL5A3P25940 1745 aaPredicted RBP11.59□□□□□ -0.55
RBFOX1-202ENST00000340209 CCNT1O60563 726 aaKnown RBP11.59□□□□□ -0.55
RBFOX1-202ENST00000340209 CRKP46108 304 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms