RNA–Protein interactions for RNA: ENST00000265806.10

R3HCC1-201, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-201ENST00000265806 SBF1O95248 1867 aa28.32■■■□□ 2.12
R3HCC1-201ENST00000265806 ELP1O95163 1332 aa28.31■■■□□ 2.12
R3HCC1-201ENST00000265806 MPHOSPH10O00566 681 aaKnown RBP28.31■■■□□ 2.12
R3HCC1-201ENST00000265806 MBD3O95983 291 aa28.31■■■□□ 2.12
R3HCC1-201ENST00000265806 STAG2Q8N3U4 1231 aa28.31■■■□□ 2.12
R3HCC1-201ENST00000265806 CFAP45Q9UL16 551 aa28.31■■■□□ 2.12
R3HCC1-201ENST00000265806 GPT2Q8TD30 523 aa28.29■■■□□ 2.12
R3HCC1-201ENST00000265806 CLIP2Q9UDT6 1046 aa28.29■■■□□ 2.12
R3HCC1-201ENST00000265806 MMP1P03956 469 aa28.29■■■□□ 2.12
R3HCC1-201ENST00000265806 XBP1P17861 261 aa28.29■■■□□ 2.12
R3HCC1-201ENST00000265806 TMEM179Q6ZVK1 233 aa28.29■■■□□ 2.12
R3HCC1-201ENST00000265806 ZNF396Q96N95 335 aaPredicted RBP28.29■■■□□ 2.12
R3HCC1-201ENST00000265806 KANSL2Q9H9L4 492 aa28.29■■■□□ 2.12
R3HCC1-201ENST00000265806 TFIP11Q9UBB9 837 aaKnown RBP28.29■■■□□ 2.12
R3HCC1-201ENST00000265806 PGAP2Q9UHJ9 254 aa28.29■■■□□ 2.12
R3HCC1-201ENST00000265806 KIF28PB7ZC32 967 aa28.28■■■□□ 2.12
R3HCC1-201ENST00000265806 TBC1D12O60347 775 aa28.28■■■□□ 2.12
R3HCC1-201ENST00000265806 EGFRP00533 1210 aa28.28■■■□□ 2.12
R3HCC1-201ENST00000265806 PARP1P09874 1014 aaKnown RBP28.28■■■□□ 2.12
R3HCC1-201ENST00000265806 U2AF2P26368 475 aaKnown RBP eCLIP28.28■■■□□ 2.12
R3HCC1-201ENST00000265806 TNNI2P48788 182 aa28.28■■■□□ 2.12
R3HCC1-201ENST00000265806 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.28■■■□□ 2.12
R3HCC1-201ENST00000265806 SNHG28P0DPA3 235 aa28.27■■■□□ 2.12
R3HCC1-201ENST00000265806 SMARCA1P28370 1054 aa28.27■■■□□ 2.12
R3HCC1-201ENST00000265806 UBE2HP62256 183 aa28.27■■■□□ 2.12
R3HCC1-201ENST00000265806 TNFAIP1Q13829 316 aa28.27■■■□□ 2.12
R3HCC1-201ENST00000265806 CLEC10AQ8IUN9 316 aa28.27■■■□□ 2.12
R3HCC1-201ENST00000265806 GPC2Q8N158 579 aa28.27■■■□□ 2.12
R3HCC1-201ENST00000265806 TMEM39BQ9GZU3 492 aa28.27■■■□□ 2.12
R3HCC1-201ENST00000265806 NYAP2Q9P242 653 aa28.27■■■□□ 2.12
R3HCC1-201ENST00000265806 GADD45BO75293 160 aaPredicted RBP28.27■■■□□ 2.12
R3HCC1-201ENST00000265806 PDHBP11177 359 aa28.27■■■□□ 2.12
R3HCC1-201ENST00000265806 ABCB5Q2M3G0 1257 aa28.27■■■□□ 2.12
R3HCC1-201ENST00000265806 LEO1Q8WVC0 666 aaPredicted RBP28.27■■■□□ 2.12
R3HCC1-201ENST00000265806 MKL1Q969V6 931 aa28.27■■■□□ 2.12
R3HCC1-201ENST00000265806 SPATA32Q96LK8 384 aa28.27■■■□□ 2.12
R3HCC1-201ENST00000265806 SPZ1Q9BXG8 430 aa28.27■■■□□ 2.12
R3HCC1-201ENST00000265806 KLRF2D3W0D1 207 aa28.26■■■□□ 2.11
R3HCC1-201ENST00000265806 SAFBQ15424 915 aaKnown RBP eCLIP28.26■■■□□ 2.11
R3HCC1-201ENST00000265806 PFKFB3Q16875 520 aaPredicted RBP28.26■■■□□ 2.11
R3HCC1-201ENST00000265806 RBM26Q5T8P6 1007 aaKnown RBP28.26■■■□□ 2.11
R3HCC1-201ENST00000265806 SAMD7Q7Z3H4 446 aa28.26■■■□□ 2.11
R3HCC1-201ENST00000265806 LRRC47Q8N1G4 583 aaKnown RBP28.26■■■□□ 2.11
R3HCC1-201ENST00000265806 SCG2P13521 617 aa28.25■■■□□ 2.11
R3HCC1-201ENST00000265806 KIF4BQ2VIQ3 1234 aa28.25■■■□□ 2.11
R3HCC1-201ENST00000265806 MYSM1Q5VVJ2 828 aa28.25■■■□□ 2.11
R3HCC1-201ENST00000265806 MTMR7Q9Y216 660 aa28.25■■■□□ 2.11
R3HCC1-201ENST00000265806 BAZ2BQ9UIF8 2168 aaKnown RBP28.25■■■□□ 2.11
R3HCC1-201ENST00000265806 MYH4Q9Y623 1939 aa28.25■■■□□ 2.11
R3HCC1-201ENST00000265806 hCG_1642624A0A1W2PR95 340 aa28.24■■■□□ 2.11
R3HCC1-201ENST00000265806 H7C1D1 291 aa28.24■■■□□ 2.11
R3HCC1-201ENST00000265806 YBX3P16989 372 aaKnown RBP eCLIP28.24■■■□□ 2.11
R3HCC1-201ENST00000265806 MAP3K10Q02779 954 aa28.24■■■□□ 2.11
R3HCC1-201ENST00000265806 SLC35G1Q2M3R5 365 aa28.24■■■□□ 2.11
R3HCC1-201ENST00000265806 ASPRV1Q53RT3 343 aa28.24■■■□□ 2.11
R3HCC1-201ENST00000265806 USP17L2Q6R6M4 530 aa28.24■■■□□ 2.11
R3HCC1-201ENST00000265806 FOXP1Q9H334 677 aaPredicted RBP28.24■■■□□ 2.11
R3HCC1-201ENST00000265806 KCNJ14Q9UNX9 436 aa28.24■■■□□ 2.11
R3HCC1-201ENST00000265806 USP17L5A8MUK1 530 aa28.24■■■□□ 2.11
R3HCC1-201ENST00000265806 CYTH3O43739 400 aa28.24■■■□□ 2.11
R3HCC1-201ENST00000265806 TBC1D10BQ4KMP7 808 aaPredicted RBP28.24■■■□□ 2.11
R3HCC1-201ENST00000265806 SHISA4Q96DD7 197 aa28.24■■■□□ 2.11
R3HCC1-201ENST00000265806 USP28Q96RU2 1077 aa28.24■■■□□ 2.11
R3HCC1-201ENST00000265806 PHF20Q9BVI0 1012 aa28.24■■■□□ 2.11
R3HCC1-201ENST00000265806 VPS54Q9P1Q0 977 aa28.24■■■□□ 2.11
R3HCC1-201ENST00000265806 GDF11O95390 407 aa28.23■■■□□ 2.11
R3HCC1-201ENST00000265806 GNL2Q13823 731 aaKnown RBP28.23■■■□□ 2.11
R3HCC1-201ENST00000265806 RASA3Q14644 834 aa28.23■■■□□ 2.11
R3HCC1-201ENST00000265806 SEPT2Q15019 361 aa28.23■■■□□ 2.11
R3HCC1-201ENST00000265806 SHROOM1Q2M3G4 852 aaPredicted RBP28.23■■■□□ 2.11
R3HCC1-201ENST00000265806 RASGRP2Q7LDG7 609 aa28.23■■■□□ 2.11
R3HCC1-201ENST00000265806 DIS3L2Q8IYB7 885 aaKnown RBP28.23■■■□□ 2.11
R3HCC1-201ENST00000265806 CABP5Q9NP86 173 aa28.23■■■□□ 2.11
R3HCC1-201ENST00000265806 GPRC5DQ9NZD1 345 aa28.23■■■□□ 2.11
R3HCC1-201ENST00000265806 RCOR1Q9UKL0 485 aa28.23■■■□□ 2.11
R3HCC1-201ENST00000265806 GOLGA8HP0CJ92 632 aa28.22■■■□□ 2.11
R3HCC1-201ENST00000265806 EEF2P13639 858 aaKnown RBP28.22■■■□□ 2.11
R3HCC1-201ENST00000265806 RRP1BQ14684 758 aaKnown RBP28.22■■■□□ 2.11
R3HCC1-201ENST00000265806 ICA1Q05084 483 aa28.22■■■□□ 2.11
R3HCC1-201ENST00000265806 GSE1Q14687 1217 aa28.22■■■□□ 2.11
R3HCC1-201ENST00000265806 CDAN1Q8IWY9 1227 aa28.22■■■□□ 2.11
R3HCC1-201ENST00000265806 GZF1Q9H116 711 aaPredicted RBP28.22■■■□□ 2.11
R3HCC1-201ENST00000265806 RTEL1Q9NZ71 1219 aa28.22■■■□□ 2.11
R3HCC1-201ENST00000265806 BTBD18B2RXH4 712 aa28.21■■■□□ 2.11
R3HCC1-201ENST00000265806 GH2P01242 217 aa28.21■■■□□ 2.11
R3HCC1-201ENST00000265806 SIAH1Q8IUQ4 282 aa28.21■■■□□ 2.11
R3HCC1-201ENST00000265806 NOSTRINQ8IVI9 506 aa28.21■■■□□ 2.11
R3HCC1-201ENST00000265806 SH3GLB2Q9NR46 395 aa28.21■■■□□ 2.11
R3HCC1-201ENST00000265806 POLR3EQ9NVU0 708 aa28.21■■■□□ 2.11
R3HCC1-201ENST00000265806 JAG1P78504 1218 aa28.2■■■□□ 2.11
R3HCC1-201ENST00000265806 ATP2B2Q01814 1243 aa28.2■■■□□ 2.11
R3HCC1-201ENST00000265806 TEPSINQ96N21 525 aa28.2■■■□□ 2.11
R3HCC1-201ENST00000265806 HACL1Q9UJ83 578 aa28.2■■■□□ 2.11
R3HCC1-201ENST00000265806 SYNPO2Q9UMS6 1093 aa28.2■■■□□ 2.11
R3HCC1-201ENST00000265806 ZNF543Q08ER8 600 aa28.19■■■□□ 2.1
R3HCC1-201ENST00000265806 GPATCH4Q5T3I0 446 aaKnown RBP28.19■■■□□ 2.1
R3HCC1-201ENST00000265806 FAM177A1Q8N128 213 aaPredicted RBP28.19■■■□□ 2.1
R3HCC1-201ENST00000265806 FTOQ9C0B1 505 aaKnown RBP eCLIP28.19■■■□□ 2.1
R3HCC1-201ENST00000265806 RIOX1Q9H6W3 641 aa28.19■■■□□ 2.1
R3HCC1-201ENST00000265806 CAVIN1Q6NZI2 390 aaKnown RBP28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms