RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 ADALQ6DHV7 355 aa10.65□□□□□ -0.7
SSR3-201ENST00000265044 NKX2-3Q8TAU0 364 aa10.65□□□□□ -0.7
SSR3-201ENST00000265044 DNAJC25Q9H1X3 360 aa10.65□□□□□ -0.7
SSR3-201ENST00000265044 RTEL1Q9NZ71 1219 aa10.65□□□□□ -0.7
SSR3-201ENST00000265044 SMCO2A6NFE2 343 aa10.65□□□□□ -0.7
SSR3-201ENST00000265044 KIF28PB7ZC32 967 aa10.65□□□□□ -0.7
SSR3-201ENST00000265044 ELP1O95163 1332 aa10.65□□□□□ -0.7
SSR3-201ENST00000265044 TROAPQ12815 778 aa10.65□□□□□ -0.7
SSR3-201ENST00000265044 ANKRD36CQ5JPF3 1778 aa10.65□□□□□ -0.7
SSR3-201ENST00000265044 TTC38Q5R3I4 469 aa10.65□□□□□ -0.7
SSR3-201ENST00000265044 NHSQ6T4R5 1651 aa10.65□□□□□ -0.7
SSR3-201ENST00000265044 FOXP4Q8IVH2 680 aaPredicted RBP10.65□□□□□ -0.7
SSR3-201ENST00000265044 SRBD1Q8N5C6 995 aaKnown RBP10.65□□□□□ -0.7
SSR3-201ENST00000265044 LINC00301Q8NCQ3 95 aa10.65□□□□□ -0.7
SSR3-201ENST00000265044 PRMT6Q96LA8 375 aaPredicted RBP10.65□□□□□ -0.7
SSR3-201ENST00000265044 COL1A1P02452 1464 aaPredicted RBP10.65□□□□□ -0.71
SSR3-201ENST00000265044 NRDCO43847 1150 aa10.65□□□□□ -0.71
SSR3-201ENST00000265044 BMP15O95972 392 aa10.65□□□□□ -0.71
SSR3-201ENST00000265044 AFMP43652 599 aa10.65□□□□□ -0.71
SSR3-201ENST00000265044 TTLL12Q14166 644 aaPredicted RBP10.65□□□□□ -0.71
SSR3-201ENST00000265044 SEC23AQ15436 765 aa10.65□□□□□ -0.71
SSR3-201ENST00000265044 C16orf86Q6ZW13 317 aa10.65□□□□□ -0.71
SSR3-201ENST00000265044 BLIDQ8IZY5 108 aa10.65□□□□□ -0.71
SSR3-201ENST00000265044 OXER1Q8TDS5 423 aa10.65□□□□□ -0.71
SSR3-201ENST00000265044 ARHGEF10LQ9HCE6 1279 aa10.65□□□□□ -0.71
SSR3-201ENST00000265044 PCDHAC2Q9Y5I4 1007 aa10.65□□□□□ -0.71
SSR3-201ENST00000265044 MYO3BQ8WXR4 1341 aa10.64□□□□□ -0.71
SSR3-201ENST00000265044 USP17L5A8MUK1 530 aa10.64□□□□□ -0.71
SSR3-201ENST00000265044 SLFN13Q68D06 897 aa10.64□□□□□ -0.71
SSR3-201ENST00000265044 RSBN1LQ6PCB5 846 aaPredicted RBP10.64□□□□□ -0.71
SSR3-201ENST00000265044 FBXL16Q8N461 479 aa10.64□□□□□ -0.71
SSR3-201ENST00000265044 CCDC47Q96A33 483 aaKnown RBP10.64□□□□□ -0.71
SSR3-201ENST00000265044 DHX58Q96C10 678 aa10.64□□□□□ -0.71
SSR3-201ENST00000265044 FOXP1Q9H334 677 aaPredicted RBP10.64□□□□□ -0.71
SSR3-201ENST00000265044 KANSL2Q9H9L4 492 aa10.64□□□□□ -0.71
SSR3-201ENST00000265044 THSD7AQ9UPZ6 1657 aa10.64□□□□□ -0.71
SSR3-201ENST00000265044 ZNF202O95125 648 aa10.64□□□□□ -0.71
SSR3-201ENST00000265044 GH2P01242 217 aa10.64□□□□□ -0.71
SSR3-201ENST00000265044 SSBP05455 408 aaKnown RBP eCLIP10.64□□□□□ -0.71
SSR3-201ENST00000265044 RHBDL3P58872 404 aa10.64□□□□□ -0.71
SSR3-201ENST00000265044 SEPT2Q15019 361 aa10.64□□□□□ -0.71
SSR3-201ENST00000265044 TBC1D10BQ4KMP7 808 aaPredicted RBP10.64□□□□□ -0.71
SSR3-201ENST00000265044 DACT2Q5SW24 774 aa10.64□□□□□ -0.71
SSR3-201ENST00000265044 FAM163AQ96GL9 167 aaPredicted RBP10.64□□□□□ -0.71
SSR3-201ENST00000265044 PGBD1Q96JS3 809 aa10.64□□□□□ -0.71
SSR3-201ENST00000265044 PIGSQ96S52 555 aa10.64□□□□□ -0.71
SSR3-201ENST00000265044 DDX4Q9NQI0 724 aaKnown RBP10.64□□□□□ -0.71
SSR3-201ENST00000265044 POLR3EQ9NVU0 708 aa10.64□□□□□ -0.71
SSR3-201ENST00000265044 RCAN1P53805 252 aa10.63□□□□□ -0.71
SSR3-201ENST00000265044 SLC39A14Q15043 492 aa10.63□□□□□ -0.71
SSR3-201ENST00000265044 USH1GQ495M9 461 aa10.63□□□□□ -0.71
SSR3-201ENST00000265044 TMEM87AQ8NBN3 555 aa10.63□□□□□ -0.71
SSR3-201ENST00000265044 TCP11L1Q9NUJ3 509 aa10.63□□□□□ -0.71
SSR3-201ENST00000265044 BIN2Q9UBW5 565 aaPredicted RBP10.63□□□□□ -0.71
SSR3-201ENST00000265044 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.63□□□□□ -0.71
SSR3-201ENST00000265044 WDHD1O75717 1129 aaPredicted RBP10.63□□□□□ -0.71
SSR3-201ENST00000265044 TNFAIP1Q13829 316 aa10.63□□□□□ -0.71
SSR3-201ENST00000265044 KLHL10Q6JEL2 608 aa10.63□□□□□ -0.71
SSR3-201ENST00000265044 CUL5Q93034 780 aa10.63□□□□□ -0.71
SSR3-201ENST00000265044 ZDHHC15Q96MV8 337 aa10.63□□□□□ -0.71
SSR3-201ENST00000265044 CLSTN2Q9H4D0 955 aa10.63□□□□□ -0.71
SSR3-201ENST00000265044 TCEAL9Q9UHQ7 104 aa10.63□□□□□ -0.71
SSR3-201ENST00000265044 SERPINA10Q9UK55 444 aa10.63□□□□□ -0.71
SSR3-201ENST00000265044 KCNH3Q9ULD8 1083 aa10.63□□□□□ -0.71
SSR3-201ENST00000265044 TACC3Q9Y6A5 838 aa10.63□□□□□ -0.71
SSR3-201ENST00000265044 STK36Q9NRP7 1315 aa10.63□□□□□ -0.71
SSR3-201ENST00000265044 SMC2O95347 1197 aa10.63□□□□□ -0.71
SSR3-201ENST00000265044 SLURP2P0DP57 97 aa10.63□□□□□ -0.71
SSR3-201ENST00000265044 NDUFA8P51970 172 aa10.63□□□□□ -0.71
SSR3-201ENST00000265044 TGFB2P61812 414 aa10.63□□□□□ -0.71
SSR3-201ENST00000265044 NTRK3Q16288 839 aa10.63□□□□□ -0.71
SSR3-201ENST00000265044 STX1AQ16623 288 aa10.63□□□□□ -0.71
SSR3-201ENST00000265044 INF2Q27J81 1249 aa10.63□□□□□ -0.71
SSR3-201ENST00000265044 APOBEC3HQ6NTF7 200 aaKnown RBP10.63□□□□□ -0.71
SSR3-201ENST00000265044 WNK3Q9BYP7 1800 aa10.63□□□□□ -0.71
SSR3-201ENST00000265044 POLR2DO15514 142 aaKnown RBP10.62□□□□□ -0.71
SSR3-201ENST00000265044 LMOD1P29536 600 aaPredicted RBP10.62□□□□□ -0.71
SSR3-201ENST00000265044 COA7Q96BR5 231 aa10.62□□□□□ -0.71
SSR3-201ENST00000265044 UIMC1Q96RL1 719 aa10.62□□□□□ -0.71
SSR3-201ENST00000265044 PLIN2Q99541 437 aa10.62□□□□□ -0.71
SSR3-201ENST00000265044 FAM217BQ9NTX9 383 aaPredicted RBP10.62□□□□□ -0.71
SSR3-201ENST00000265044 MTMR4Q9NYA4 1195 aa10.62□□□□□ -0.71
SSR3-201ENST00000265044 PCDHB6Q9Y5E3 794 aa10.62□□□□□ -0.71
SSR3-201ENST00000265044 TMEM232C9JQI7 657 aa10.62□□□□□ -0.71
SSR3-201ENST00000265044 CCNT1O60563 726 aaKnown RBP10.62□□□□□ -0.71
SSR3-201ENST00000265044 CUTAO60888 179 aa10.62□□□□□ -0.71
SSR3-201ENST00000265044 PFKFB1P16118 471 aa10.62□□□□□ -0.71
SSR3-201ENST00000265044 MRPL12P52815 198 aaKnown RBP10.62□□□□□ -0.71
SSR3-201ENST00000265044 REXO1Q8N1G1 1221 aaKnown RBP10.62□□□□□ -0.71
SSR3-201ENST00000265044 FAM200AQ8TCP9 573 aa10.62□□□□□ -0.71
SSR3-201ENST00000265044 SPON1Q9HCB6 807 aa10.62□□□□□ -0.71
SSR3-201ENST00000265044 DTHD1Q6ZMT9 781 aa10.62□□□□□ -0.71
SSR3-201ENST00000265044 LUZP1Q86V48 1076 aa10.62□□□□□ -0.71
SSR3-201ENST00000265044 IL17RBQ9NRM6 502 aa10.62□□□□□ -0.71
SSR3-201ENST00000265044 DDTLA6NHG4 134 aaPredicted RBP10.61□□□□□ -0.71
SSR3-201ENST00000265044 EEF2P13639 858 aaKnown RBP10.61□□□□□ -0.71
SSR3-201ENST00000265044 NT5C2P49902 561 aa10.61□□□□□ -0.71
SSR3-201ENST00000265044 CXCL9Q07325 125 aa10.61□□□□□ -0.71
SSR3-201ENST00000265044 PTGDRQ13258 359 aa10.61□□□□□ -0.71
SSR3-201ENST00000265044 NONOQ15233 471 aaKnown RBP eCLIP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms