RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 SLMAPQ14BN4 828 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 TRIM60Q495X7 471 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 ADAT2Q7Z6V5 191 aaKnown RBP3.79□□□□□ -1.8
NEB-201ENST00000172853 VPS37BQ9H9H4 285 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 NFU1Q9UMS0 254 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 NPHP3Q7Z494 1330 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 ESPNB1AK53 854 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 CEP85LQ5SZL2 805 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 EXD1Q8NHP7 514 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 CADPSQ9ULU8 1353 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 CCNB2O95067 398 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 SRRM1Q8IYB3 904 aaKnown RBP3.79□□□□□ -1.8
NEB-201ENST00000172853 PARP2Q9UGN5 583 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 SPOPO43791 374 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 MCM7P33993 719 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 INAQ16352 499 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 DBN1Q16643 649 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 IFT20Q8IY31 132 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 ECT2Q9H8V3 914 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 ADD3Q9UEY8 706 aaKnown RBP3.79□□□□□ -1.8
NEB-201ENST00000172853 TNNC1P63316 161 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 DCAF17Q5H9S7 520 aaPredicted RBP3.79□□□□□ -1.8
NEB-201ENST00000172853 DZIP3Q86Y13 1208 aaKnown RBP3.79□□□□□ -1.8
NEB-201ENST00000172853 ZNF428Q96B54 188 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 FOPNLQ96NB1 174 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 NACC1Q96RE7 527 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 NEUROD4Q9HD90 331 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 LACTBP83111 547 aaPredicted RBP3.79□□□□□ -1.8
NEB-201ENST00000172853 ARL13BQ3SXY8 428 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 CCDC93Q567U6 631 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 TSSK1BQ9BXA7 367 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 CCNL1Q9UK58 526 aaPredicted RBP3.79□□□□□ -1.8
NEB-201ENST00000172853 ALDH1A1P00352 501 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 APBA1Q02410 837 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 CUL1Q13616 776 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 HAUS6Q7Z4H7 955 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 TRIM42Q8IWZ5 723 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 MEIS1O00470 390 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 ENC1O14682 589 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 CNKSR1Q969H4 720 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 NOB1Q9ULX3 412 aaKnown RBP3.79□□□□□ -1.8
NEB-201ENST00000172853 USP16Q9Y5T5 823 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 MMEL1Q495T6 779 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 SESTD1Q86VW0 696 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 SNX19Q92543 992 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 SPATA17Q96L03 361 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 BCRP11274 1271 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 IL1RL1Q01638 556 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 RAD51Q06609 339 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 MED21Q13503 144 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 VEPH1Q14D04 833 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 FAM186BQ8IYM0 893 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 CPXCR1Q8N123 301 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 PRDM5Q9NQX1 630 aaPredicted RBP3.79□□□□□ -1.8
NEB-201ENST00000172853 GBP1P32455 592 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 SH3KBP1Q96B97 665 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 FGD4Q96M96 766 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 PKD2L1Q9P0L9 805 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 GAPVD1Q14C86 1478 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 KIF21BO75037 1637 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 MAP3K13O43283 966 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 RINT1Q6NUQ1 792 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 TCP11Q8WWU5 503 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 SLC10A4Q96EP9 437 aa3.79□□□□□ -1.8
NEB-201ENST00000172853 ZNF215Q9UL58 517 aaPredicted RBP3.79□□□□□ -1.8
NEB-201ENST00000172853 MYCP01106 439 aaPredicted RBP3.78□□□□□ -1.8
NEB-201ENST00000172853 TMEM132EQ6IEE7 984 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 OOSP2Q86WS3 158 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 JARID2Q92833 1246 aaPredicted RBP3.78□□□□□ -1.8
NEB-201ENST00000172853 HPCAL4Q9UM19 191 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 CAPN7Q9Y6W3 813 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 HMGXB3Q12766 1538 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 F13A1P00488 732 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 KRT8P05787 483 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 TUBB4BP68371 445 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 NSMFQ6X4W1 530 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 NME8Q8N427 588 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 APPL2Q8NEU8 664 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 CACTINQ8WUQ7 758 aaKnown RBP3.78□□□□□ -1.8
NEB-201ENST00000172853 RSAD2Q8WXG1 361 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 ACTN4O43707 911 aaKnown RBP3.78□□□□□ -1.8
NEB-201ENST00000172853 NAA30Q147X3 362 aaPredicted RBP3.78□□□□□ -1.8
NEB-201ENST00000172853 DTHD1Q6ZMT9 781 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 CHMP1BQ7LBR1 199 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 TEX11Q8IYF3 940 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 HELBQ8NG08 1087 aaPredicted RBP3.78□□□□□ -1.8
NEB-201ENST00000172853 PLEKHH1Q9ULM0 1364 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 ALDH1A2O94788 518 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 CA4P22748 312 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 FNBP4Q8N3X1 1017 aaPredicted RBP3.78□□□□□ -1.8
NEB-201ENST00000172853 P3H4Q92791 437 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 SNX25Q9H3E2 840 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 PAPOLBQ9NRJ5 636 aaKnown RBP3.78□□□□□ -1.8
NEB-201ENST00000172853 CHD1O14646 1710 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 SEMA3FQ13275 785 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 TTC23Q5W5X9 447 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 KSR2Q6VAB6 950 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 PHF21AQ96BD5 680 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 GDAP1L1Q96MZ0 367 aa3.78□□□□□ -1.8
NEB-201ENST00000172853 SRRTQ9BXP5 876 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms