RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 DCAF8L2P0C7V8 631 aa5.79□□□□□ -1.48
NEB-201ENST00000172853 FAM9AQ8IZU1 332 aaPredicted RBP5.74□□□□□ -1.49
NEB-201ENST00000172853 PELP1Q8IZL8 1130 aaKnown RBP5.61□□□□□ -1.51
NEB-201ENST00000172853 APLP2Q06481 763 aa5.42□□□□□ -1.54
NEB-201ENST00000172853 CCER1Q8TC90 406 aaPredicted RBP5.38□□□□□ -1.55
NEB-201ENST00000172853 ERICH6Q7L0X2 663 aa5.35□□□□□ -1.55
NEB-201ENST00000172853 MYT1LQ9UL68 1186 aa5.28□□□□□ -1.56
NEB-201ENST00000172853 ATP1B4Q9UN42 357 aaPredicted RBP5.2□□□□□ -1.58
NEB-201ENST00000172853 YTHDC1Q96MU7 727 aaKnown RBP5.17□□□□□ -1.58
NEB-201ENST00000172853 DAXXQ9UER7 740 aaPredicted RBP5.16□□□□□ -1.58
NEB-201ENST00000172853 EHMT2Q96KQ7 1210 aa5.15□□□□□ -1.58
NEB-201ENST00000172853 SUPT5HO00267 1087 aaKnown RBP5.13□□□□□ -1.59
NEB-201ENST00000172853 NEFLP07196 543 aa5.11□□□□□ -1.59
NEB-201ENST00000172853 SLC4A1APQ9BWU0 796 aaKnown RBP5.09□□□□□ -1.6
NEB-201ENST00000172853 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.06□□□□□ -1.6
NEB-201ENST00000172853 HNRNPUL2Q1KMD3 747 aaKnown RBP5.06□□□□□ -1.6
NEB-201ENST00000172853 CHIC1Q5VXU3 224 aa5.06□□□□□ -1.6
NEB-201ENST00000172853 NISCHQ9Y2I1 1504 aa5.04□□□□□ -1.6
NEB-201ENST00000172853 RANGAP1P46060 587 aaPredicted RBP5.03□□□□□ -1.6
NEB-201ENST00000172853 ZBTB47Q9UFB7 747 aaPredicted RBP5.02□□□□□ -1.61
NEB-201ENST00000172853 NEFMP07197 916 aa5.01□□□□□ -1.61
NEB-201ENST00000172853 CENPBP07199 599 aaPredicted RBP5.01□□□□□ -1.61
NEB-201ENST00000172853 PPARGC1BQ86YN6 1023 aaKnown RBP5□□□□□ -1.61
NEB-201ENST00000172853 MYT1Q01538 1121 aa5□□□□□ -1.61
NEB-201ENST00000172853 SLC24A1O60721 1099 aa4.99□□□□□ -1.61
NEB-201ENST00000172853 TTBK1Q5TCY1 1321 aaPredicted RBP4.98□□□□□ -1.61
NEB-201ENST00000172853 BCANQ96GW7 911 aa4.97□□□□□ -1.61
NEB-201ENST00000172853 POLR3GLQ9BT43 218 aa4.97□□□□□ -1.61
NEB-201ENST00000172853 CLSPNQ9HAW4 1339 aa4.97□□□□□ -1.61
NEB-201ENST00000172853 ZNF316A6NFI3 1004 aaPredicted RBP4.96□□□□□ -1.62
NEB-201ENST00000172853 ESF1Q9H501 851 aaKnown RBP4.94□□□□□ -1.62
NEB-201ENST00000172853 CDK11BP21127 795 aaKnown RBP4.94□□□□□ -1.62
NEB-201ENST00000172853 CDK11AQ9UQ88 783 aaPredicted RBP4.94□□□□□ -1.62
NEB-201ENST00000172853 UBTFP17480 764 aaKnown RBP4.92□□□□□ -1.62
NEB-201ENST00000172853 PCGF6Q9BYE7 350 aa4.91□□□□□ -1.62
NEB-201ENST00000172853 ZEB1P37275 1124 aaPredicted RBP4.9□□□□□ -1.63
NEB-201ENST00000172853 SHROOM4Q9ULL8 1493 aa4.88□□□□□ -1.63
NEB-201ENST00000172853 NPM2Q86SE8 214 aaKnown RBP4.87□□□□□ -1.63
NEB-201ENST00000172853 RTL5Q5HYW3 569 aaPredicted RBP4.86□□□□□ -1.63
NEB-201ENST00000172853 AEBP2Q6ZN18 517 aaPredicted RBP4.85□□□□□ -1.63
NEB-201ENST00000172853 HRCP23327 699 aa4.83□□□□□ -1.64
NEB-201ENST00000172853 TRIM41Q8WV44 630 aa4.82□□□□□ -1.64
NEB-201ENST00000172853 A0A0G2JS52 829 aa4.81□□□□□ -1.64
NEB-201ENST00000172853 KRI1Q8N9T8 703 aaKnown RBP4.81□□□□□ -1.64
NEB-201ENST00000172853 STAG3Q9UJ98 1225 aa4.81□□□□□ -1.64
NEB-201ENST00000172853 CNGB1Q14028 1251 aaPredicted RBP4.81□□□□□ -1.64
NEB-201ENST00000172853 SCAF1Q9H7N4 1312 aaKnown RBP4.81□□□□□ -1.64
NEB-201ENST00000172853 CANXP27824 592 aaKnown RBP4.8□□□□□ -1.64
NEB-201ENST00000172853 NPM1P06748 294 aaKnown RBP eCLIP4.79□□□□□ -1.64
NEB-201ENST00000172853 PLPPR3Q6T4P5 718 aa4.79□□□□□ -1.64
NEB-201ENST00000172853 ITGAEP38570 1179 aa4.78□□□□□ -1.64
NEB-201ENST00000172853 ANP32BQ92688 251 aaKnown RBP4.77□□□□□ -1.65
NEB-201ENST00000172853 BCL11AQ9H165 835 aa4.76□□□□□ -1.65
NEB-201ENST00000172853 HAP1P54257 671 aaPredicted RBP4.75□□□□□ -1.65
NEB-201ENST00000172853 TRIM52Q96A61 297 aa4.75□□□□□ -1.65
NEB-201ENST00000172853 DCAF8L1A6NGE4 600 aa4.74□□□□□ -1.65
NEB-201ENST00000172853 FBLN2P98095 1184 aa4.73□□□□□ -1.65
NEB-201ENST00000172853 NPHP1O15259 732 aa4.72□□□□□ -1.65
NEB-201ENST00000172853 GTF3C3Q9Y5Q9 886 aa4.71□□□□□ -1.65
NEB-201ENST00000172853 HSP90AA1P07900 732 aaKnown RBP4.71□□□□□ -1.66
NEB-201ENST00000172853 TULP1O00294 542 aaPredicted RBP4.7□□□□□ -1.66
NEB-201ENST00000172853 NCBP3Q53F19 620 aaKnown RBP4.7□□□□□ -1.66
NEB-201ENST00000172853 C14orf37Q86TY3 774 aa4.7□□□□□ -1.66
NEB-201ENST00000172853 PRKCSHP14314 528 aaPredicted RBP4.7□□□□□ -1.66
NEB-201ENST00000172853 PRM3Q9NNZ6 103 aa4.7□□□□□ -1.66
NEB-201ENST00000172853 LOC105371045A0A1W2PR82 267 aa4.69□□□□□ -1.66
NEB-201ENST00000172853 TRHP20396 242 aaPredicted RBP4.69□□□□□ -1.66
NEB-201ENST00000172853 CHGAP10645 457 aaKnown RBP4.68□□□□□ -1.66
NEB-201ENST00000172853 FOXD1Q16676 465 aa4.68□□□□□ -1.66
NEB-201ENST00000172853 GOLGA2Q08379 1002 aa4.67□□□□□ -1.66
NEB-201ENST00000172853 TMX4Q9H1E5 349 aaPredicted RBP4.67□□□□□ -1.66
NEB-201ENST00000172853 UPF2Q9HAU5 1272 aaKnown RBP4.65□□□□□ -1.66
NEB-201ENST00000172853 FAM50AQ14320 339 aaKnown RBP4.65□□□□□ -1.66
NEB-201ENST00000172853 ZBTB7CA1YPR0 619 aa4.65□□□□□ -1.66
NEB-201ENST00000172853 CCDC180Q9P1Z9 1646 aa4.65□□□□□ -1.66
NEB-201ENST00000172853 ZNF326Q5BKZ1 582 aaKnown RBP4.65□□□□□ -1.67
NEB-201ENST00000172853 EIF4G2P78344 907 aaKnown RBP eCLIP4.65□□□□□ -1.67
NEB-201ENST00000172853 FKBP8Q14318 412 aa4.65□□□□□ -1.67
NEB-201ENST00000172853 ARXQ96QS3 562 aa4.64□□□□□ -1.67
NEB-201ENST00000172853 CLSTN1O94985 981 aa4.64□□□□□ -1.67
NEB-201ENST00000172853 ANP32EQ9BTT0 268 aa4.63□□□□□ -1.67
NEB-201ENST00000172853 TRIM44Q96DX7 344 aaPredicted RBP4.63□□□□□ -1.67
NEB-201ENST00000172853 ZRSR1Q15695 479 aaKnown RBP4.63□□□□□ -1.67
NEB-201ENST00000172853 CCDC136Q96JN2 1154 aa4.63□□□□□ -1.67
NEB-201ENST00000172853 MYH16Q9H6N6 1097 aa4.62□□□□□ -1.67
NEB-201ENST00000172853 L1TD1Q5T7N2 865 aaKnown RBP4.61□□□□□ -1.67
NEB-201ENST00000172853 EIF5BO60841 1220 aaKnown RBP4.6□□□□□ -1.67
NEB-201ENST00000172853 NCLP19338 710 aaKnown RBP4.6□□□□□ -1.67
NEB-201ENST00000172853 ANP32CO43423 234 aa4.6□□□□□ -1.67
NEB-201ENST00000172853 DIEXFQ68CQ4 756 aaKnown RBP4.6□□□□□ -1.67
NEB-201ENST00000172853 ARID4BQ4LE39 1312 aaPredicted RBP4.6□□□□□ -1.67
NEB-201ENST00000172853 PPP1R15AO75807 674 aaPredicted RBP4.59□□□□□ -1.67
NEB-201ENST00000172853 ABCC9O60706 1549 aa4.59□□□□□ -1.67
NEB-201ENST00000172853 PLEKHG5O94827 1062 aa4.59□□□□□ -1.67
NEB-201ENST00000172853 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.59□□□□□ -1.68
NEB-201ENST00000172853 ZNF777Q9ULD5 760 aaPredicted RBP4.58□□□□□ -1.68
NEB-201ENST00000172853 GLIPR1L2Q4G1C9 344 aa4.58□□□□□ -1.68
NEB-201ENST00000172853 RTN4Q9NQC3 1192 aaKnown RBP4.58□□□□□ -1.68
NEB-201ENST00000172853 PHF23Q9BUL5 403 aaPredicted RBP4.57□□□□□ -1.68
NEB-201ENST00000172853 NEUROD1Q13562 356 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms