RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 CrcpO35427 148 aa12.77□□□□□ -0.36
Lig1-211ENSMUST00000177588 Wnt7aP24383 349 aa12.77□□□□□ -0.36
Lig1-211ENSMUST00000177588 Cep112Q5PR68 954 aa12.77□□□□□ -0.36
Lig1-211ENSMUST00000177588 Tbc1d5Q80XQ2 815 aa12.77□□□□□ -0.36
Lig1-211ENSMUST00000177588 Apol10aQ8CCA5 318 aa12.77□□□□□ -0.36
Lig1-211ENSMUST00000177588 Ccdc73Q8CDM4 1066 aa12.77□□□□□ -0.36
Lig1-211ENSMUST00000177588 Txndc5Q91W90 417 aa12.77□□□□□ -0.36
Lig1-211ENSMUST00000177588 Brms1Q99N20 246 aa12.77□□□□□ -0.36
Lig1-211ENSMUST00000177588 Ttc14Q9CSP9 761 aa12.77□□□□□ -0.36
Lig1-211ENSMUST00000177588 Dbndd1Q9CZ00 160 aa12.77□□□□□ -0.36
Lig1-211ENSMUST00000177588 RabggtaQ9JHK4 567 aa12.77□□□□□ -0.36
Lig1-211ENSMUST00000177588 Col20a1Q923P0 1320 aa12.77□□□□□ -0.36
Lig1-211ENSMUST00000177588 Cyp3a25O09158 503 aa12.77□□□□□ -0.37
Lig1-211ENSMUST00000177588 Eva1cP58659 440 aa12.77□□□□□ -0.37
Lig1-211ENSMUST00000177588 Plbd2Q3TCN2 594 aa12.77□□□□□ -0.37
Lig1-211ENSMUST00000177588 Ccdc114Q3UX62 658 aa12.77□□□□□ -0.37
Lig1-211ENSMUST00000177588 Chaf1aQ9QWF0 911 aa12.77□□□□□ -0.37
Lig1-211ENSMUST00000177588 Foxo3Q9WVH4 672 aa12.77□□□□□ -0.37
Lig1-211ENSMUST00000177588 Gm43738A0A0G2JEA5 862 aa12.77□□□□□ -0.37
Lig1-211ENSMUST00000177588 Zscan20B2KFW1 1030 aa12.77□□□□□ -0.37
Lig1-211ENSMUST00000177588 Nkx2-5P42582 318 aa12.77□□□□□ -0.37
Lig1-211ENSMUST00000177588 Sun3Q5SS91 320 aa12.77□□□□□ -0.37
Lig1-211ENSMUST00000177588 Ccdc96Q9CR92 584 aa12.77□□□□□ -0.37
Lig1-211ENSMUST00000177588 Lmbr1Q9JIT0 490 aa12.77□□□□□ -0.37
Lig1-211ENSMUST00000177588 Pdcd6ipQ9WU78 869 aaKnown RBP12.77□□□□□ -0.37
Lig1-211ENSMUST00000177588 Znf638Q61464 1960 aaKnown RBP12.76□□□□□ -0.37
Lig1-211ENSMUST00000177588 Lrrc6O88978 473 aa12.76□□□□□ -0.37
Lig1-211ENSMUST00000177588 Q3TYL0 343 aa12.76□□□□□ -0.37
Lig1-211ENSMUST00000177588 Tsr1Q5SWD9 803 aa12.76□□□□□ -0.37
Lig1-211ENSMUST00000177588 Tshz2Q68FE9 1030 aa12.76□□□□□ -0.37
Lig1-211ENSMUST00000177588 Recql4Q75NR7 1216 aaKnown RBP12.76□□□□□ -0.37
Lig1-211ENSMUST00000177588 Cct8l1Q80YT3 562 aa12.76□□□□□ -0.37
Lig1-211ENSMUST00000177588 Syf2Q9D198 242 aaKnown RBP12.76□□□□□ -0.37
Lig1-211ENSMUST00000177588 Uso1Q9Z1Z0 959 aaKnown RBP12.76□□□□□ -0.37
Lig1-211ENSMUST00000177588 Ulk4Q3V129 1303 aa12.76□□□□□ -0.37
Lig1-211ENSMUST00000177588 Myh3P13541 1940 aa12.76□□□□□ -0.37
Lig1-211ENSMUST00000177588 Krt24A1L317 512 aa12.76□□□□□ -0.37
Lig1-211ENSMUST00000177588 Slc4a4O88343 1079 aa12.76□□□□□ -0.37
Lig1-211ENSMUST00000177588 Kiaa0319Q5SZV5 1081 aa12.76□□□□□ -0.37
Lig1-211ENSMUST00000177588 Cct6bQ61390 531 aa12.76□□□□□ -0.37
Lig1-211ENSMUST00000177588 Tas2r124Q7M718 309 aa12.76□□□□□ -0.37
Lig1-211ENSMUST00000177588 Nop9Q8BMC4 636 aaKnown RBP12.76□□□□□ -0.37
Lig1-211ENSMUST00000177588 Spata16Q8C636 571 aa12.76□□□□□ -0.37
Lig1-211ENSMUST00000177588 Phc3Q8CHP6 981 aa12.76□□□□□ -0.37
Lig1-211ENSMUST00000177588 Popdc2Q9ES82 367 aa12.76□□□□□ -0.37
Lig1-211ENSMUST00000177588 Egfl6Q9JJZ5 550 aa12.76□□□□□ -0.37
Lig1-211ENSMUST00000177588 Rtkn2Q14B46 604 aa12.75□□□□□ -0.37
Lig1-211ENSMUST00000177588 Plekha7Q3UIL6 1118 aaKnown RBP12.75□□□□□ -0.37
Lig1-211ENSMUST00000177588 Adam6bQ6IMH7 756 aa12.75□□□□□ -0.37
Lig1-211ENSMUST00000177588 Smarca1Q6PGB8 1046 aa12.75□□□□□ -0.37
Lig1-211ENSMUST00000177588 Gga3Q8BMI3 718 aa12.75□□□□□ -0.37
Lig1-211ENSMUST00000177588 Sash3Q8K352 380 aa12.75□□□□□ -0.37
Lig1-211ENSMUST00000177588 Tmem143Q8VD26 458 aa12.75□□□□□ -0.37
Lig1-211ENSMUST00000177588 Pold4Q9CWP8 107 aa12.75□□□□□ -0.37
Lig1-211ENSMUST00000177588 Fam217aQ9D9W6 419 aa12.75□□□□□ -0.37
Lig1-211ENSMUST00000177588 Gm4340L7N2C4 268 aa12.75□□□□□ -0.37
Lig1-211ENSMUST00000177588 Npy5rO70342 466 aa12.75□□□□□ -0.37
Lig1-211ENSMUST00000177588 Fut8Q9WTS2 575 aa12.75□□□□□ -0.37
Lig1-211ENSMUST00000177588 Gm5580A0A0N4SVP8 411 aa12.75□□□□□ -0.37
Lig1-211ENSMUST00000177588 Kif23E9Q5G3 953 aa12.75□□□□□ -0.37
Lig1-211ENSMUST00000177588 GpiP06745 558 aaKnown RBP12.75□□□□□ -0.37
Lig1-211ENSMUST00000177588 Pram1Q6BCL1 675 aa12.75□□□□□ -0.37
Lig1-211ENSMUST00000177588 Zc3h6Q8BYK8 1177 aa12.75□□□□□ -0.37
Lig1-211ENSMUST00000177588 Pcdha12Q91Y18 950 aa12.75□□□□□ -0.37
Lig1-211ENSMUST00000177588 Wdr64Q9D565 1086 aa12.75□□□□□ -0.37
Lig1-211ENSMUST00000177588 Fbxo3Q9DC63 480 aa12.75□□□□□ -0.37
Lig1-211ENSMUST00000177588 4931408C20RikE9PWP9 1381 aa12.74□□□□□ -0.37
Lig1-211ENSMUST00000177588 Tpp1O89023 562 aa12.74□□□□□ -0.37
Lig1-211ENSMUST00000177588 Sec23aQ01405 765 aa12.74□□□□□ -0.37
Lig1-211ENSMUST00000177588 HrQ61645 1182 aa12.74□□□□□ -0.37
Lig1-211ENSMUST00000177588 Ccdc93Q7TQK5 629 aa12.74□□□□□ -0.37
Lig1-211ENSMUST00000177588 Ube3cQ80U95 1083 aa12.74□□□□□ -0.37
Lig1-211ENSMUST00000177588 Epn1Q80VP1 575 aa12.74□□□□□ -0.37
Lig1-211ENSMUST00000177588 Fam161bQ8CB59 589 aa12.74□□□□□ -0.37
Lig1-211ENSMUST00000177588 FliiQ9JJ28 1271 aa12.74□□□□□ -0.37
Lig1-211ENSMUST00000177588 Efcc1Q9JJF6 558 aa12.74□□□□□ -0.37
Lig1-211ENSMUST00000177588 Tob2Q9JM55 345 aa12.74□□□□□ -0.37
Lig1-211ENSMUST00000177588 Uchl5Q9WUP7 329 aa12.74□□□□□ -0.37
Lig1-211ENSMUST00000177588 Dennd3A2RT67 1274 aa12.74□□□□□ -0.37
Lig1-211ENSMUST00000177588 Tnni2P13412 182 aa12.74□□□□□ -0.37
Lig1-211ENSMUST00000177588 Gnat2P50149 354 aa12.74□□□□□ -0.37
Lig1-211ENSMUST00000177588 Tlr8P58682 1032 aa12.74□□□□□ -0.37
Lig1-211ENSMUST00000177588 Ctdp1Q7TSG2 960 aa12.74□□□□□ -0.37
Lig1-211ENSMUST00000177588 E2f4Q8R0K9 410 aa12.74□□□□□ -0.37
Lig1-211ENSMUST00000177588 Hexim1Q8R409 356 aaKnown RBP12.74□□□□□ -0.37
Lig1-211ENSMUST00000177588 ToporslQ9D2F8 683 aa12.74□□□□□ -0.37
Lig1-211ENSMUST00000177588 Copb1Q9JIF7 953 aa12.74□□□□□ -0.37
Lig1-211ENSMUST00000177588 Abhd2Q9QXM0 425 aa12.74□□□□□ -0.37
Lig1-211ENSMUST00000177588 Cnbd1B1AWM0 430 aa12.73□□□□□ -0.37
Lig1-211ENSMUST00000177588 Chp1P61022 195 aa12.73□□□□□ -0.37
Lig1-211ENSMUST00000177588 Tubb5P99024 444 aaKnown RBP12.73□□□□□ -0.37
Lig1-211ENSMUST00000177588 Cfap100Q80VN0 613 aa12.73□□□□□ -0.37
Lig1-211ENSMUST00000177588 Q8C5C9 218 aa12.73□□□□□ -0.37
Lig1-211ENSMUST00000177588 CpvlQ9D3S9 478 aa12.73□□□□□ -0.37
Lig1-211ENSMUST00000177588 Igsf9bE9PZ19 1328 aa12.73□□□□□ -0.37
Lig1-211ENSMUST00000177588 Pth1rP41593 591 aa12.73□□□□□ -0.37
Lig1-211ENSMUST00000177588 RragbQ6NTA4 374 aa12.73□□□□□ -0.37
Lig1-211ENSMUST00000177588 Adcy2Q80TL1 1090 aa12.73□□□□□ -0.37
Lig1-211ENSMUST00000177588 Otop3Q80UF9 577 aa12.73□□□□□ -0.37
Lig1-211ENSMUST00000177588 Rnf41Q8BH75 317 aa12.73□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 35.7 ms