RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 TMA64Q04600 565 aaKnown RBP0.04□□□□□ -2.4
snR47snR47 FLC1Q08967 793 aa0.04□□□□□ -2.4
snR47snR47 YER078W-AQ3E7A2 54 aa0.04□□□□□ -2.4
snR47snR47 SAL1D6W196 494 aa0.03□□□□□ -2.4
snR47snR47 ARG1P22768 420 aa0.03□□□□□ -2.4
snR47snR47 MF(ALPHA)2P32435 120 aa0.03□□□□□ -2.4
snR47snR47 ERG1P32476 496 aaKnown RBP0.03□□□□□ -2.4
snR47snR47 ERC1P38767 581 aa0.03□□□□□ -2.4
snR47snR47 ARO9P38840 513 aaPredicted RBP0.03□□□□□ -2.4
snR47snR47 YRB30P53107 440 aaPredicted RBP0.03□□□□□ -2.4
snR47snR47 SHY1P53266 389 aa0.03□□□□□ -2.4
snR47snR47 MCP2Q06567 569 aa0.03□□□□□ -2.4
snR47snR47 YPR091CQ06833 770 aa0.03□□□□□ -2.4
snR47snR47 TMS1Q12116 473 aa0.03□□□□□ -2.4
snR47snR47 SSF2Q12153 453 aaPredicted RBP0.03□□□□□ -2.4
snR47snR47 SEC12P11655 471 aa0.02□□□□□ -2.41
snR47snR47 CLN3P13365 580 aa0.02□□□□□ -2.41
snR47snR47 YCR006CP25350 157 aa0.02□□□□□ -2.41
snR47snR47 PCL2P25693 308 aa0.02□□□□□ -2.41
snR47snR47 RMA1P36001 430 aaKnown RBP0.02□□□□□ -2.41
snR47snR47 MIC60P36112 540 aa0.02□□□□□ -2.41
snR47snR47 SEC31P38968 1273 aaKnown RBP0.02□□□□□ -2.41
snR47snR47 CHS6P40955 746 aa0.02□□□□□ -2.41
snR47snR47 HLJ1P48353 224 aa0.02□□□□□ -2.41
snR47snR47 COS12P53053 380 aa0.02□□□□□ -2.41
snR47snR47 HAL1Q01766 294 aa0.02□□□□□ -2.41
snR47snR47 CTL1Q03220 320 aaKnown RBP0.02□□□□□ -2.41
snR47snR47 YMR027WQ04371 470 aa0.02□□□□□ -2.41
snR47snR47 GRC3Q07845 632 aa0.02□□□□□ -2.41
snR47snR47 PRM7Q12459 698 aa0.02□□□□□ -2.41
snR47snR47 GSY1P23337 708 aa0.01□□□□□ -2.41
snR47snR47 PCL1P24867 279 aa0.01□□□□□ -2.41
snR47snR47 GID7P25569 745 aa0.01□□□□□ -2.41
snR47snR47 YER130CP39959 443 aa0.01□□□□□ -2.41
snR47snR47 YEN1P40028 759 aa0.01□□□□□ -2.41
snR47snR47 YPS6P40583 537 aa0.01□□□□□ -2.41
snR47snR47 ASI1P54074 624 aa0.01□□□□□ -2.41
snR47snR47 ARP10Q04549 284 aa0.01□□□□□ -2.41
snR47snR47 CIA1Q05583 330 aa0.01□□□□□ -2.41
snR47snR47 FPR4Q06205 392 aaPredicted RBP0.01□□□□□ -2.41
snR47snR47 JIP5Q06214 492 aaPredicted RBP0.01□□□□□ -2.41
snR47snR47 HNT3Q08702 217 aa0.01□□□□□ -2.41
snR47snR47 YER145C-AA0A023PYF4 145 aa0□□□□□ -2.41
snR47snR47 MEF1P25039 761 aa0□□□□□ -2.41
snR47snR47 DEG1P31115 442 aaKnown RBP0□□□□□ -2.41
snR47snR47 SPC110P32380 944 aa0□□□□□ -2.41
snR47snR47 SPC34P36131 295 aa0□□□□□ -2.41
snR47snR47 PEA2P40091 420 aa0□□□□□ -2.41
snR47snR47 IKS1P47042 667 aa0□□□□□ -2.41
snR47snR47 TIM54P47045 478 aa0□□□□□ -2.41
snR47snR47 YJL049WP47048 450 aa0□□□□□ -2.41
snR47snR47 BFA1P47113 574 aa0□□□□□ -2.41
snR47snR47 PEF1P53238 335 aa0□□□□□ -2.41
snR47snR47 YLR455WQ06188 304 aa0□□□□□ -2.41
snR47snR47 TRE2Q08693 809 aa0□□□□□ -2.41
snR47snR47 AYT1Q12226 474 aa0□□□□□ -2.41
snR47snR47 ERV2Q12284 196 aa0□□□□□ -2.41
snR47snR47 HEM2P05373 342 aa-0.01□□□□□ -2.41
snR47snR47 HSP26P15992 214 aaKnown RBP RIP-Chip data-0.01□□□□□ -2.41not detected
snR47snR47 PAH1P32567 862 aa-0.01□□□□□ -2.41
snR47snR47 PAD1P33751 242 aaKnown RBP RIP-Chip data-0.01□□□□□ -2.41not detected
snR47snR47 RPF2P36160 344 aaKnown RBP-0.01□□□□□ -2.41
snR47snR47 RGI2P40188 164 aa-0.01□□□□□ -2.41
snR47snR47 MSO1P53604 210 aaKnown RBP-0.01□□□□□ -2.41
snR47snR47 MAK10Q02197 733 aa-0.01□□□□□ -2.41
snR47snR47 FAP7Q12055 197 aaPredicted RBP-0.01□□□□□ -2.41
snR47snR47 ADH2P00331 348 aaKnown RBP-0.02□□□□□ -2.41
snR47snR47 CDC26P14724 124 aa-0.02□□□□□ -2.41
snR47snR47 MTF1P14908 341 aaKnown RBP-0.02□□□□□ -2.41
snR47snR47 STE50P25344 346 aa-0.02□□□□□ -2.41
snR47snR47 PRP45P28004 379 aaPredicted RBP-0.02□□□□□ -2.41
snR47snR47 ARO2P28777 376 aaKnown RBP-0.02□□□□□ -2.41
snR47snR47 NDC1P32500 655 aa-0.02□□□□□ -2.41
snR47snR47 SAC6P32599 642 aaKnown RBP-0.02□□□□□ -2.41
snR47snR47 YBL059WP34224 193 aa-0.02□□□□□ -2.41
snR47snR47 CHK1P38147 527 aa-0.02□□□□□ -2.41
snR47snR47 ERG7P38604 731 aa-0.02□□□□□ -2.41
snR47snR47 RPT2P40327 437 aaKnown RBP-0.02□□□□□ -2.41
snR47snR47 HXT9P40885 567 aa-0.02□□□□□ -2.41
snR47snR47 SNG1P46950 547 aa-0.02□□□□□ -2.41
snR47snR47 ARK1P53974 638 aa-0.02□□□□□ -2.41
snR47snR47 ELP3Q02908 557 aaKnown RBP-0.02□□□□□ -2.41
snR47snR47 YEH2Q07950 538 aa-0.02□□□□□ -2.41
snR47snR47 SFL1P20134 766 aa-0.03□□□□□ -2.41
snR47snR47 RVS161P25343 265 aaKnown RBP-0.03□□□□□ -2.41
snR47snR47 IME2P32581 645 aa-0.03□□□□□ -2.41
snR47snR47 TYS1P36421 394 aaKnown RBP-0.03□□□□□ -2.41
snR47snR47 LNP1P38878 278 aa-0.03□□□□□ -2.41
snR47snR47 PHM8P40025 321 aa-0.03□□□□□ -2.41
snR47snR47 REE1P40893 198 aa-0.03□□□□□ -2.41
snR47snR47 SGF73P53165 657 aa-0.03□□□□□ -2.41
snR47snR47 EDE1P34216 1381 aa-0.04□□□□□ -2.42
snR47snR47 MRP2P10663 115 aaPredicted RBP-0.04□□□□□ -2.42
snR47snR47 RER1P25560 188 aa-0.04□□□□□ -2.42
snR47snR47 MRC1P25588 1096 aa-0.04□□□□□ -2.42
snR47snR47 MTC4P38335 694 aaKnown RBP-0.04□□□□□ -2.42
snR47snR47 NDT80P38830 627 aa-0.04□□□□□ -2.42
snR47snR47 SQS1P53866 767 aaKnown RBP-0.04□□□□□ -2.42
snR47snR47 MOT3P54785 490 aaKnown RBP-0.04□□□□□ -2.42
snR47snR47 VPS64Q03944 604 aa-0.04□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms