RNA–Protein interactions for RNA: snR44

snR44, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR44, Length 211 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR44	snR44	CFD1	P40558	293 aa		4.21	□□□□□ -1.74
snR44	snR44	CTF18	P49956	741 aa		4.21	□□□□□ -1.74
snR44	snR44	ASE1	P50275	885 aa		4.21	□□□□□ -1.74
snR44	snR44	COP1	P53622	1201 aa	Known RBP	4.21	□□□□□ -1.74
snR44	snR44	SSM4	P40318	1319 aa		4.21	□□□□□ -1.74
snR44	snR44	TY2A-LR1	P0C2J4	438 aa		4.2	□□□□□ -1.74
snR44	snR44	TY2A-F	P0CX61	438 aa		4.2	□□□□□ -1.74
snR44	snR44	TY2A-GR2	P0CX62	438 aa		4.2	□□□□□ -1.74
snR44	snR44	PCT1	P13259	424 aa		4.2	□□□□□ -1.74
snR44	snR44	YAP1	P19880	650 aa	Known RBP	4.2	□□□□□ -1.74
snR44	snR44	YSP3	P25036	478 aa		4.2	□□□□□ -1.74
snR44	snR44	TY2A-C	P25383	438 aa		4.2	□□□□□ -1.74
snR44	snR44	MSS51	P32335	436 aa		4.2	□□□□□ -1.74
snR44	snR44	ECM32	P32644	1121 aa	Known RBP	4.2	□□□□□ -1.74
snR44	snR44	PSY4	P38193	441 aa		4.2	□□□□□ -1.74
snR44	snR44	ASG1	P40467	964 aa		4.2	□□□□□ -1.74
snR44	snR44	MNT3	P40549	630 aa		4.2	□□□□□ -1.74
snR44	snR44	YJL107C	P42947	387 aa		4.2	□□□□□ -1.74
snR44	snR44	YPR003C	P53394	754 aa		4.2	□□□□□ -1.74
snR44	snR44	DCP2	P53550	970 aa	Known RBP	4.2	□□□□□ -1.74
snR44	snR44	ADE16	P54113	591 aa	Known RBP	4.2	□□□□□ -1.74
snR44	snR44	TY2A-DR2	Q03483	438 aa		4.2	□□□□□ -1.74
snR44	snR44	TY2A-B	Q12260	438 aa		4.2	□□□□□ -1.74
snR44	snR44	TY2A-OR2	Q12293	438 aa		4.2	□□□□□ -1.74
snR44	snR44	TY2A-DR1	Q12392	438 aa		4.2	□□□□□ -1.74
snR44	snR44	TY2A-OR1	Q12439	438 aa		4.2	□□□□□ -1.74
snR44	snR44	TY2A-DR3	Q99303	438 aa		4.2	□□□□□ -1.74
snR44	snR44	ARN1	P38731	627 aa		4.19	□□□□□ -1.74
snR44	snR44	YIL024C	P40543	189 aa		4.19	□□□□□ -1.74
snR44	snR44	IST3	P40565	148 aa	Predicted RBP	4.19	□□□□□ -1.74
snR44	snR44	CDC1	P40986	491 aa		4.19	□□□□□ -1.74
snR44	snR44	PSP1	P50896	841 aa	Known RBP	4.19	□□□□□ -1.74
snR44	snR44	COG1	P53079	417 aa		4.19	□□□□□ -1.74
snR44	snR44	GTR1	Q00582	310 aa		4.19	□□□□□ -1.74
snR44	snR44	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
snR44	snR44	TEF4	P36008	412 aa	Known RBP	4.18	□□□□□ -1.74
snR44	snR44	UME6	P39001	836 aa		4.18	□□□□□ -1.74
snR44	snR44	TPA1	P40032	644 aa	Known RBP	4.18	□□□□□ -1.74
snR44	snR44	JHD1	P40034	492 aa		4.18	□□□□□ -1.74
snR44	snR44	GLO1	P50107	326 aa		4.18	□□□□□ -1.74
snR44	snR44	VTC3	Q02725	835 aa		4.18	□□□□□ -1.74
snR44	snR44	SWA2	Q06677	668 aa		4.18	□□□□□ -1.74
snR44	snR44	PCD1	Q12524	340 aa		4.18	□□□□□ -1.74
snR44	snR44	SUI3	P09064	285 aa	Known RBP	4.17	□□□□□ -1.74
snR44	snR44	DPB3	P27344	201 aa		4.17	□□□□□ -1.74
snR44	snR44	OCT1	P35999	772 aa		4.17	□□□□□ -1.74
snR44	snR44	SPC97	P38863	823 aa		4.17	□□□□□ -1.74
snR44	snR44	BNA1	P47096	177 aa		4.17	□□□□□ -1.74
snR44	snR44	RRT6	P53117	311 aa	Predicted RBP	4.17	□□□□□ -1.74
snR44	snR44	TMA16	Q08687	178 aa		4.17	□□□□□ -1.74
snR44	snR44	PFA4	Q12006	378 aa		4.17	□□□□□ -1.74
snR44	snR44	YER190C-B	P0CX94	160 aa		4.16	□□□□□ -1.74
snR44	snR44	YEL077W-A	P0CX95	160 aa		4.16	□□□□□ -1.74
snR44	snR44	YGR296C-B	P0CX96	160 aa		4.16	□□□□□ -1.74
snR44	snR44	YPL283W-B	P0CX97	160 aa		4.16	□□□□□ -1.74
snR44	snR44	YPR204C-A	P0CX98	160 aa		4.16	□□□□□ -1.74
snR44	snR44	MRP2	P10663	115 aa	Predicted RBP	4.16	□□□□□ -1.74
snR44	snR44	CNA1	P23287	553 aa		4.16	□□□□□ -1.74
snR44	snR44	RPT3	P33298	428 aa	Known RBP	4.16	□□□□□ -1.74
snR44	snR44	TFC3	P34111	1160 aa		4.16	□□□□□ -1.74
snR44	snR44	TOM71	P38825	639 aa	Known RBP	4.16	□□□□□ -1.74
snR44	snR44	IML2	P47031	731 aa		4.16	□□□□□ -1.74
snR44	snR44	ECM16	Q04217	1267 aa	Known RBP	4.16	□□□□□ -1.74
snR44	snR44	VID22	Q05934	901 aa		4.16	□□□□□ -1.74
snR44	snR44	PDR8	Q06149	701 aa		4.16	□□□□□ -1.74
snR44	snR44	MCH4	Q08268	501 aa		4.16	□□□□□ -1.74
snR44	snR44	RGT2	Q12300	763 aa		4.16	□□□□□ -1.74
snR44	snR44	ICT1	Q12385	394 aa		4.16	□□□□□ -1.74
snR44	snR44	ERG27	Q12452	347 aa	Known RBP	4.16	□□□□□ -1.74
snR44	snR44	GAL4	P04386	881 aa		4.15	□□□□□ -1.75
snR44	snR44	SNF1	P06782	633 aa	Known RBP	4.15	□□□□□ -1.75
snR44	snR44	SRP54	P20424	541 aa	Known RBP	4.15	□□□□□ -1.75
snR44	snR44	TRX2	P22803	104 aa	Known RBP	4.15	□□□□□ -1.75
snR44	snR44	SRB5	P32585	307 aa		4.15	□□□□□ -1.75
snR44	snR44	TMT1	P32643	299 aa		4.15	□□□□□ -1.75
snR44	snR44	AAP1	P37898	856 aa	Known RBP	4.15	□□□□□ -1.75
snR44	snR44	YMR124W	P39523	943 aa	Known RBP	4.15	□□□□□ -1.75
snR44	snR44	PCI8	P40512	444 aa		4.15	□□□□□ -1.75
snR44	snR44	EAF7	P53911	425 aa	Known RBP	4.15	□□□□□ -1.75
snR44	snR44	SEC5	P89102	971 aa		4.15	□□□□□ -1.75
snR44	snR44	PIG1	Q06216	648 aa		4.15	□□□□□ -1.75
snR44	snR44	CRN1	Q06440	651 aa		4.15	□□□□□ -1.75
snR44	snR44	TRM8	Q12009	286 aa		4.15	□□□□□ -1.75
snR44	snR44	RRI1	Q12468	440 aa		4.15	□□□□□ -1.75
snR44	snR44	VCX1	Q99385	411 aa		4.15	□□□□□ -1.75
snR44	snR44	YPR089W	O13585	888 aa		4.14	□□□□□ -1.75
snR44	snR44	CNS1	P33313	385 aa		4.14	□□□□□ -1.75
snR44	snR44	SLC1	P33333	303 aa		4.14	□□□□□ -1.75
snR44	snR44	LHS1	P36016	881 aa		4.14	□□□□□ -1.75
snR44	snR44	NTR2	P36118	322 aa	Predicted RBP	4.14	□□□□□ -1.75
snR44	snR44	ADE17	P38009	592 aa	Known RBP	4.14	□□□□□ -1.75
snR44	snR44	SEC31	P38968	1273 aa	Known RBP	4.14	□□□□□ -1.75
snR44	snR44	MRX1	P40050	688 aa		4.14	□□□□□ -1.75
snR44	snR44	KAP123	P40069	1113 aa	Known RBP	4.14	□□□□□ -1.75
snR44	snR44	RIC1	P40395	1056 aa		4.14	□□□□□ -1.75
snR44	snR44	SNM1	P40993	198 aa		4.14	□□□□□ -1.75
snR44	snR44	GAT1	P43574	510 aa		4.14	□□□□□ -1.75
snR44	snR44	RPN11	P43588	306 aa	Known RBP	4.14	□□□□□ -1.75
snR44	snR44	VPS4	P52917	437 aa		4.14	□□□□□ -1.75
snR44	snR44	YML131W	Q03102	365 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms