RNA–Protein interactions for RNA: YOR322C

LDB19, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene LDB19, Length 2,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB19YOR322C SGT1Q08446 395 aa6□□□□□ -1.45
LDB19YOR322C HFI1Q12060 488 aa6□□□□□ -1.45
LDB19YOR322C SET6Q12529 373 aa6□□□□□ -1.45
LDB19YOR322C MHP1P43638 1398 aa6□□□□□ -1.45
LDB19YOR322C PTP1P25044 335 aa6□□□□□ -1.45
LDB19YOR322C CMK1P27466 446 aaKnown RBP6□□□□□ -1.45
LDB19YOR322C SUV3P32580 737 aa6□□□□□ -1.45
LDB19YOR322C MRT4P33201 236 aaKnown RBP6□□□□□ -1.45
LDB19YOR322C DBP7P36120 742 aaKnown RBP6□□□□□ -1.45
LDB19YOR322C MRPL37P36532 105 aa6□□□□□ -1.45
LDB19YOR322C CDC27P38042 758 aa6□□□□□ -1.45
LDB19YOR322C SUR2P38992 349 aa6□□□□□ -1.45
LDB19YOR322C FHL1P39521 936 aa6□□□□□ -1.45
LDB19YOR322C SPF1P39986 1215 aaKnown RBP6□□□□□ -1.45
LDB19YOR322C GTO1P48239 356 aa6□□□□□ -1.45
LDB19YOR322C ZRG17P53735 605 aa6□□□□□ -1.45
LDB19YOR322C ALO1P54783 526 aaKnown RBP6□□□□□ -1.45
LDB19YOR322C TIM50Q02776 476 aa6□□□□□ -1.45
LDB19YOR322C NUT2Q06213 157 aa6□□□□□ -1.45
LDB19YOR322C HBT1Q07653 1046 aaKnown RBP6□□□□□ -1.45
LDB19YOR322C DIN7Q12086 430 aa6□□□□□ -1.45
LDB19YOR322C RPS17AP02407 136 aaKnown RBP5.99□□□□□ -1.45
LDB19YOR322C MATALPHA2P0CY08 210 aa5.99□□□□□ -1.45
LDB19YOR322C HMLALPHA2P0CY09 210 aa5.99□□□□□ -1.45
LDB19YOR322C RPS17BP14127 136 aaKnown RBP5.99□□□□□ -1.45
LDB19YOR322C RRT12P25381 491 aa5.99□□□□□ -1.45
LDB19YOR322C EMC1P25574 760 aa5.99□□□□□ -1.45
LDB19YOR322C IMG2P25642 146 aaPredicted RBP5.99□□□□□ -1.45
LDB19YOR322C RPD3P32561 433 aa5.99□□□□□ -1.45
LDB19YOR322C ELF1P36053 145 aa5.99□□□□□ -1.45
LDB19YOR322C SUL1P38359 859 aa5.99□□□□□ -1.45
LDB19YOR322C UTP25P40498 721 aaKnown RBP5.99□□□□□ -1.45
LDB19YOR322C ELP2P42935 788 aa5.99□□□□□ -1.45
LDB19YOR322C MCM6P53091 1017 aaKnown RBP5.99□□□□□ -1.45
LDB19YOR322C ARE2P53629 642 aaKnown RBP5.99□□□□□ -1.45
LDB19YOR322C HED1Q03937 162 aa5.99□□□□□ -1.45
LDB19YOR322C PPM1Q04081 328 aa5.99□□□□□ -1.45
LDB19YOR322C MSC3Q05812 728 aa5.99□□□□□ -1.45
LDB19YOR322C VPS38Q05919 439 aa5.99□□□□□ -1.45
LDB19YOR322C DDC1Q08949 612 aa5.99□□□□□ -1.45
LDB19YOR322C NFT1P0CE68 1218 aa5.99□□□□□ -1.45
LDB19YOR322C PRR1P28708 518 aa5.99□□□□□ -1.45
LDB19YOR322C MRPL10P36520 322 aa5.99□□□□□ -1.45
LDB19YOR322C AIM3P38266 947 aaKnown RBP5.99□□□□□ -1.45
LDB19YOR322C STT3P39007 718 aaKnown RBP5.99□□□□□ -1.45
LDB19YOR322C RTR1P40084 226 aaPredicted RBP5.99□□□□□ -1.45
LDB19YOR322C ATM1P40416 690 aa5.99□□□□□ -1.45
LDB19YOR322C SLM1P40485 686 aa5.99□□□□□ -1.45
LDB19YOR322C RPL34BP40525 121 aaKnown RBP5.99□□□□□ -1.45
LDB19YOR322C CIN5P40917 295 aa5.99□□□□□ -1.45
LDB19YOR322C IDS2P46958 469 aa5.99□□□□□ -1.45
LDB19YOR322C LSM1P47017 172 aaKnown RBP5.99□□□□□ -1.45
LDB19YOR322C EOS1P53938 366 aa5.99□□□□□ -1.45
LDB19YOR322C ORC3P54790 616 aa5.99□□□□□ -1.45
LDB19YOR322C CSI1Q04368 295 aa5.99□□□□□ -1.45
LDB19YOR322C PUS7Q08647 676 aaKnown RBP5.99□□□□□ -1.45
LDB19YOR322C SEC63P14906 663 aa5.98□□□□□ -1.45
LDB19YOR322C VMA16P23968 213 aa5.98□□□□□ -1.45
LDB19YOR322C HSP30P25619 332 aa5.98□□□□□ -1.45
LDB19YOR322C SPO23P33757 523 aa5.98□□□□□ -1.45
LDB19YOR322C MRPL7P36519 292 aa5.98□□□□□ -1.45
LDB19YOR322C GIP4P39732 760 aa5.98□□□□□ -1.45
LDB19YOR322C UFE1P41834 346 aa5.98□□□□□ -1.45
LDB19YOR322C CSN12P47130 423 aa5.98□□□□□ -1.45
LDB19YOR322C CPR6P53691 371 aaKnown RBP5.98□□□□□ -1.45
LDB19YOR322C NAF1P53919 492 aaKnown RBP5.98□□□□□ -1.45
LDB19YOR322C UFD2P54860 961 aa5.98□□□□□ -1.45
LDB19YOR322C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.98□□□□□ -1.45not detected
LDB19YOR322C YAP6Q03935 383 aa5.98□□□□□ -1.45
LDB19YOR322C SNX41Q04053 625 aa5.98□□□□□ -1.45
LDB19YOR322C HFD1Q04458 532 aa5.98□□□□□ -1.45
LDB19YOR322C YPR147CQ06522 304 aaKnown RBP5.98□□□□□ -1.45
LDB19YOR322C PML1Q07930 204 aaPredicted RBP5.98□□□□□ -1.45
LDB19YOR322C YLR031WQ07978 186 aa5.98□□□□□ -1.45
LDB19YOR322C MUM3Q08750 479 aa5.98□□□□□ -1.45
LDB19YOR322C SRO7Q12038 1033 aa5.98□□□□□ -1.45
LDB19YOR322C SPE3Q12074 293 aaKnown RBP5.98□□□□□ -1.45
LDB19YOR322C RVB2Q12464 471 aaKnown RBP5.98□□□□□ -1.45
LDB19YOR322C NCB2Q92317 146 aa5.98□□□□□ -1.45
LDB19YOR322C COQ4O13525 335 aa5.98□□□□□ -1.45
LDB19YOR322C SRS2P12954 1174 aa5.98□□□□□ -1.45
LDB19YOR322C AEP2P22136 580 aa5.98□□□□□ -1.45
LDB19YOR322C BUD31P25337 157 aaPredicted RBP5.98□□□□□ -1.45
LDB19YOR322C SPP381P38282 291 aaPredicted RBP5.98□□□□□ -1.45
LDB19YOR322C NEM1P38757 446 aa5.98□□□□□ -1.45
LDB19YOR322C HXT6P39003 570 aaKnown RBP5.98□□□□□ -1.45
LDB19YOR322C HXT7P39004 570 aa5.98□□□□□ -1.45
LDB19YOR322C RSP5P39940 809 aaKnown RBP5.98□□□□□ -1.45
LDB19YOR322C YGL176CP46945 554 aa5.98□□□□□ -1.45
LDB19YOR322C CTK3P46963 296 aaPredicted RBP5.98□□□□□ -1.45
LDB19YOR322C BIO3P50277 480 aa5.98□□□□□ -1.45
LDB19YOR322C NUT1P53114 1132 aa5.98□□□□□ -1.45
LDB19YOR322C NOG1Q02892 647 aaKnown RBP5.98□□□□□ -1.45
LDB19YOR322C ARX1Q03862 593 aaKnown RBP5.98□□□□□ -1.45
LDB19YOR322C MHR1Q06630 226 aa5.98□□□□□ -1.45
LDB19YOR322C LDB17Q12342 491 aa5.98□□□□□ -1.45
LDB19YOR322C SNT2P53127 1403 aa5.97□□□□□ -1.45
LDB19YOR322C ENO1P00924 437 aaKnown RBP5.97□□□□□ -1.45
LDB19YOR322C GCN4P03069 281 aa5.97□□□□□ -1.45
LDB19YOR322C ADE3P07245 946 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms