RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeastyeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP140YOR239W ERG11P10614 530 aa3.8□□□□□ -1.8
ABP140YOR239W PEP5P12868 1029 aa3.8□□□□□ -1.8
ABP140YOR239W VPS33P20795 691 aa3.8□□□□□ -1.8
ABP140YOR239W DIT1P21623 536 aa3.8□□□□□ -1.8
ABP140YOR239W MCD4P36051 919 aa3.8□□□□□ -1.8
ABP140YOR239W TGL4P36165 910 aa3.8□□□□□ -1.8
ABP140YOR239W ALG3P38179 458 aa3.8□□□□□ -1.8
ABP140YOR239W YBL028CP38202 106 aa3.8□□□□□ -1.8
ABP140YOR239W BSD2P38356 321 aa3.8□□□□□ -1.8
ABP140YOR239W YHL050CP38721 697 aa3.8□□□□□ -1.8
ABP140YOR239W RRP8P38961 392 aaKnown RBP3.8□□□□□ -1.8
ABP140YOR239W SEO1P39709 593 aa3.8□□□□□ -1.8
ABP140YOR239W AIM2P39721 246 aa3.8□□□□□ -1.8
ABP140YOR239W MXR1P40029 184 aa3.8□□□□□ -1.8
ABP140YOR239W GID8P40208 455 aa3.8□□□□□ -1.8
ABP140YOR239W COS4P43542 379 aa3.8□□□□□ -1.8
ABP140YOR239W YFR018CP43599 363 aa3.8□□□□□ -1.8
ABP140YOR239W BNA6P43619 295 aa3.8□□□□□ -1.8
ABP140YOR239W GLG2P47011 380 aa3.8□□□□□ -1.8
ABP140YOR239W COS5P47187 383 aa3.8□□□□□ -1.8
ABP140YOR239W PIB2P53191 635 aa3.8□□□□□ -1.8
ABP140YOR239W NMA2P53204 395 aa3.8□□□□□ -1.8
ABP140YOR239W YGR125WP53273 1036 aa3.8□□□□□ -1.8
ABP140YOR239W LSC2P53312 427 aa3.8□□□□□ -1.8
ABP140YOR239W SNF12P53628 566 aa3.8□□□□□ -1.8
ABP140YOR239W COS1P53822 381 aa3.8□□□□□ -1.8
ABP140YOR239W SHR3Q02774 210 aa3.8□□□□□ -1.8
ABP140YOR239W DIG1Q03063 452 aaKnown RBP3.8□□□□□ -1.8
ABP140YOR239W YDR514CQ04408 483 aa3.8□□□□□ -1.8
ABP140YOR239W DUS3Q06053 668 aaKnown RBP3.8□□□□□ -1.8
ABP140YOR239W BCP1Q06338 283 aa3.8□□□□□ -1.8
ABP140YOR239W CDA1Q06702 301 aa3.8□□□□□ -1.8
ABP140YOR239W LOT6Q07923 191 aa3.8□□□□□ -1.8
ABP140YOR239W RSC58Q07979 502 aa3.8□□□□□ -1.8
ABP140YOR239W FEX1Q08913 375 aa3.8□□□□□ -1.8
ABP140YOR239W HER1Q12276 1246 aa3.8□□□□□ -1.8
ABP140YOR239W YOR214CQ12282 236 aa3.8□□□□□ -1.8
ABP140YOR239W CMC2Q3E7A4 109 aa3.8□□□□□ -1.8
ABP140YOR239W YEL077CQ3E7X8 1277 aa3.8□□□□□ -1.8
ABP140YOR239W YHR213W-AQ8TGT4 77 aa3.8□□□□□ -1.8
ABP140YOR239W PAB1P04147 577 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
ABP140YOR239W CCR4P31384 837 aaKnown RBP3.79□□□□□ -1.8
ABP140YOR239W TFC1P32367 649 aa3.79□□□□□ -1.8
ABP140YOR239W HBS1P32769 611 aaKnown RBP3.79□□□□□ -1.8
ABP140YOR239W PDX3P38075 228 aaKnown RBP3.79□□□□□ -1.8
ABP140YOR239W ARA1P38115 344 aa3.79□□□□□ -1.8
ABP140YOR239W KTR3P38130 404 aaPredicted RBP3.79□□□□□ -1.8
ABP140YOR239W ALG14P38242 237 aa3.79□□□□□ -1.8
ABP140YOR239W POP7P38291 140 aa3.79□□□□□ -1.8
ABP140YOR239W YBR285WP38354 144 aa3.79□□□□□ -1.8
ABP140YOR239W PMC1P38929 1173 aaPredicted RBP3.79□□□□□ -1.8
ABP140YOR239W PSF2P40359 213 aa3.79□□□□□ -1.8
ABP140YOR239W PFK26P40433 827 aaKnown RBP3.79□□□□□ -1.8
ABP140YOR239W QRI1P43123 477 aaKnown RBP3.79□□□□□ -1.8
ABP140YOR239W AIM24P47127 394 aa3.79□□□□□ -1.8
ABP140YOR239W ASE1P50275 885 aa3.79□□□□□ -1.8
ABP140YOR239W YPT32P51996 222 aaKnown RBP3.79□□□□□ -1.8
ABP140YOR239W KXD1P53158 218 aa3.79□□□□□ -1.8
ABP140YOR239W DAM1P53267 343 aa3.79□□□□□ -1.8
ABP140YOR239W YDR476CQ03362 224 aa3.79□□□□□ -1.8
ABP140YOR239W RAD33Q04231 177 aa3.79□□□□□ -1.8
ABP140YOR239W YMR027WQ04371 470 aa3.79□□□□□ -1.8
ABP140YOR239W SPO77Q06134 477 aa3.79□□□□□ -1.8
ABP140YOR239W ESF1Q06344 628 aaKnown RBP3.79□□□□□ -1.8
ABP140YOR239W YLR352WQ06479 807 aa3.79□□□□□ -1.8
ABP140YOR239W SWA2Q06677 668 aa3.79□□□□□ -1.8
ABP140YOR239W YPD1Q07688 167 aa3.79□□□□□ -1.8
ABP140YOR239W HIS4P00815 799 aaKnown RBP3.79□□□□□ -1.8
ABP140YOR239W TUF1P02992 437 aaKnown RBP3.79□□□□□ -1.8
ABP140YOR239W ADE8P04161 214 aa3.79□□□□□ -1.8
ABP140YOR239W GAL1P04385 528 aa3.79□□□□□ -1.8
ABP140YOR239W CBP6P07253 162 aaPredicted RBP3.79□□□□□ -1.8
ABP140YOR239W NFT1P0CE68 1218 aa3.79□□□□□ -1.8
ABP140YOR239W MRP7P12687 371 aa3.79□□□□□ -1.8
ABP140YOR239W PRI2P20457 528 aa3.79□□□□□ -1.8
ABP140YOR239W SGV1P23293 657 aaKnown RBP3.79□□□□□ -1.8
ABP140YOR239W YSP3P25036 478 aa3.79□□□□□ -1.8
ABP140YOR239W RRT12P25381 491 aa3.79□□□□□ -1.8
ABP140YOR239W DBF20P32328 564 aa3.79□□□□□ -1.8
ABP140YOR239W DGR2P32330 852 aa3.79□□□□□ -1.8
ABP140YOR239W DOA4P32571 926 aa3.79□□□□□ -1.8
ABP140YOR239W YPT52P36018 234 aaKnown RBP3.79□□□□□ -1.8
ABP140YOR239W CUE2P36075 443 aaKnown RBP3.79□□□□□ -1.8
ABP140YOR239W CDS1P38221 457 aa3.79□□□□□ -1.8
ABP140YOR239W ATG7P38862 630 aa3.79□□□□□ -1.8
ABP140YOR239W SPC97P38863 823 aa3.79□□□□□ -1.8
ABP140YOR239W YHR219WP38900 624 aa3.79□□□□□ -1.8
ABP140YOR239W HAL5P38970 855 aaKnown RBP3.79□□□□□ -1.8
ABP140YOR239W HPM1P40481 377 aa3.79□□□□□ -1.8
ABP140YOR239W GTT1P40582 234 aa3.79□□□□□ -1.8
ABP140YOR239W YFL034WP43564 1073 aa3.79□□□□□ -1.8
ABP140YOR239W MAD3P47074 515 aa3.79□□□□□ -1.8
ABP140YOR239W ARO8P53090 500 aaKnown RBP3.79□□□□□ -1.8
ABP140YOR239W MND1P53102 219 aa3.79□□□□□ -1.8
ABP140YOR239W RIM8P53179 542 aa3.79□□□□□ -1.8
ABP140YOR239W RPL22BP56628 122 aaKnown RBP3.79□□□□□ -1.8
ABP140YOR239W MRPL13Q02204 264 aa3.79□□□□□ -1.8
ABP140YOR239W YMR187CQ03236 431 aa3.79□□□□□ -1.8
ABP140YOR239W YMR279CQ03263 540 aa3.79□□□□□ -1.8
ABP140YOR239W YDR249CQ03787 373 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms