RNA–Protein interactions for RNA: YOL143C

RIB4, Transcript of Lumazine synthase (DMRL synthase), yeast

Gene RIB4, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIB4	YOL143C	YGL117W	P53133	265 aa		4.15	□□□□□ -1.75
RIB4	YOL143C	BUD17	P53727	317 aa		4.15	□□□□□ -1.75
RIB4	YOL143C	YNL034W	P53963	612 aa		4.15	□□□□□ -1.75
RIB4	YOL143C	YNL018C	P53976	612 aa		4.15	□□□□□ -1.75
RIB4	YOL143C	ARG7	Q04728	441 aa		4.15	□□□□□ -1.75
RIB4	YOL143C	TFC6	Q06339	672 aa		4.15	□□□□□ -1.75
RIB4	YOL143C	DIN7	Q12086	430 aa		4.15	□□□□□ -1.75
RIB4	YOL143C	VPS5	Q92331	675 aa		4.15	□□□□□ -1.75
RIB4	YOL143C	TAO3	P40468	2376 aa		4.14	□□□□□ -1.75
RIB4	YOL143C	URA3	P03962	267 aa		4.14	□□□□□ -1.75
RIB4	YOL143C	VMA2	P16140	517 aa	Known RBP	4.14	□□□□□ -1.75
RIB4	YOL143C	HOP1	P20050	605 aa		4.14	□□□□□ -1.75
RIB4	YOL143C	VPS33	P20795	691 aa		4.14	□□□□□ -1.75
RIB4	YOL143C	RPA135	P22138	1203 aa	Known RBP	4.14	□□□□□ -1.75
RIB4	YOL143C	YJL193W	P39542	402 aa		4.14	□□□□□ -1.75
RIB4	YOL143C	STL1	P39932	569 aa		4.14	□□□□□ -1.75
RIB4	YOL143C	THI6	P41835	540 aa		4.14	□□□□□ -1.75
RIB4	YOL143C	MRK1	P50873	501 aa		4.14	□□□□□ -1.75
RIB4	YOL143C	TGL2	P54857	326 aa		4.14	□□□□□ -1.75
RIB4	YOL143C	CEF1	Q03654	590 aa	Predicted RBP	4.14	□□□□□ -1.75
RIB4	YOL143C	DSE3	Q08729	430 aa		4.14	□□□□□ -1.75
RIB4	YOL143C	SLX4	Q12098	748 aa		4.14	□□□□□ -1.75
RIB4	YOL143C	TY3A-G	Q12173	290 aa		4.14	□□□□□ -1.75
RIB4	YOL143C	TY3A-I	Q99219	290 aa		4.14	□□□□□ -1.75
RIB4	YOL143C	CWH43	P25618	953 aa		4.13	□□□□□ -1.75
RIB4	YOL143C	UTR4	P32626	227 aa		4.13	□□□□□ -1.75
RIB4	YOL143C	UGP1	P32861	499 aa	Known RBP	4.13	□□□□□ -1.75
RIB4	YOL143C	TGL1	P34163	548 aa		4.13	□□□□□ -1.75
RIB4	YOL143C	DHR2	P36009	735 aa	Predicted RBP	4.13	□□□□□ -1.75
RIB4	YOL143C	YPT53	P36019	220 aa		4.13	□□□□□ -1.75
RIB4	YOL143C	PHO88	P38264	188 aa	Predicted RBP	4.13	□□□□□ -1.75
RIB4	YOL143C	VPS45	P38932	577 aa		4.13	□□□□□ -1.75
RIB4	YOL143C	IMO32	P53219	342 aa		4.13	□□□□□ -1.75
RIB4	YOL143C	HOL1	P53389	586 aa		4.13	□□□□□ -1.75
RIB4	YOL143C	CPR8	P53728	308 aa		4.13	□□□□□ -1.75
RIB4	YOL143C	MDM1	Q01846	1127 aa		4.13	□□□□□ -1.75
RIB4	YOL143C	YML122C	Q03207	126 aa		4.13	□□□□□ -1.75
RIB4	YOL143C	TMA64	Q04600	565 aa	Known RBP	4.13	□□□□□ -1.75
RIB4	YOL143C	SUE1	Q06524	206 aa		4.13	□□□□□ -1.75
RIB4	YOL143C	ULA1	Q12059	462 aa		4.13	□□□□□ -1.75
RIB4	YOL143C	YOR111W	Q99210	232 aa		4.13	□□□□□ -1.75
RIB4	YOL143C	ADE5,7	P07244	802 aa	Known RBP	4.12	□□□□□ -1.75
RIB4	YOL143C	SAM1	P10659	382 aa	Known RBP	4.12	□□□□□ -1.75
RIB4	YOL143C	RNR3	P21672	869 aa	Known RBP	4.12	□□□□□ -1.75
RIB4	YOL143C	CAP1	P28495	268 aa	Known RBP	4.12	□□□□□ -1.75
RIB4	YOL143C	YPT10	P38146	199 aa		4.12	□□□□□ -1.75
RIB4	YOL143C	PSF2	P40359	213 aa		4.12	□□□□□ -1.75
RIB4	YOL143C	MDR1	P53258	950 aa		4.12	□□□□□ -1.75
RIB4	YOL143C	YNR071C	P53757	342 aa		4.12	□□□□□ -1.75
RIB4	YOL143C	USA1	Q03714	838 aa		4.12	□□□□□ -1.75
RIB4	YOL143C	SND1	Q04007	877 aa		4.12	□□□□□ -1.75
RIB4	YOL143C	SPH1	Q06160	661 aa		4.12	□□□□□ -1.75
RIB4	YOL143C	YPL216W	Q08964	1102 aa		4.12	□□□□□ -1.75
RIB4	YOL143C	NDJ1	Q12366	352 aa		4.12	□□□□□ -1.75
RIB4	YOL143C	TUF1	P02992	437 aa	Known RBP	4.11	□□□□□ -1.75
RIB4	YOL143C	CPA2	P03965	1118 aa	Known RBP	4.11	□□□□□ -1.75
RIB4	YOL143C	ILV6	P25605	309 aa	Known RBP	4.11	□□□□□ -1.75
RIB4	YOL143C	AAD3	P25612	363 aa		4.11	□□□□□ -1.75
RIB4	YOL143C	DSS4	P32601	143 aa		4.11	□□□□□ -1.75
RIB4	YOL143C	SHP1	P34223	423 aa		4.11	□□□□□ -1.75
RIB4	YOL143C	OPY1	P38271	328 aa		4.11	□□□□□ -1.75
RIB4	YOL143C	STB5	P38699	743 aa		4.11	□□□□□ -1.75
RIB4	YOL143C	RIM4	P38741	713 aa		4.11	□□□□□ -1.75
RIB4	YOL143C	PIH1	P38768	344 aa		4.11	□□□□□ -1.75
RIB4	YOL143C	TOM71	P38825	639 aa	Known RBP	4.11	□□□□□ -1.75
RIB4	YOL143C	SCS2	P40075	244 aa	Known RBP	4.11	□□□□□ -1.75
RIB4	YOL143C	PCI8	P40512	444 aa		4.11	□□□□□ -1.75
RIB4	YOL143C	FMS1	P50264	508 aa		4.11	□□□□□ -1.75
RIB4	YOL143C	ASE1	P50275	885 aa		4.11	□□□□□ -1.75
RIB4	YOL143C	LSB1	P53281	241 aa		4.11	□□□□□ -1.75
RIB4	YOL143C	FMP30	Q02883	468 aa		4.11	□□□□□ -1.75
RIB4	YOL143C	HOF1	Q05080	669 aa		4.11	□□□□□ -1.75
RIB4	YOL143C	OSW1	Q08692	278 aa		4.11	□□□□□ -1.75
RIB4	YOL143C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
RIB4	YOL143C	ZPS1	Q12512	249 aa		4.11	□□□□□ -1.75
RIB4	YOL143C	MPD2	Q99316	277 aa		4.11	□□□□□ -1.75
RIB4	YOL143C	MATALPHA2	P0CY08	210 aa		4.1	□□□□□ -1.75
RIB4	YOL143C	HMLALPHA2	P0CY09	210 aa		4.1	□□□□□ -1.75
RIB4	YOL143C	VPS34	P22543	875 aa		4.1	□□□□□ -1.75
RIB4	YOL143C	MCR1	P36060	302 aa	Known RBP	4.1	□□□□□ -1.75
RIB4	YOL143C	DBP7	P36120	742 aa	Known RBP	4.1	□□□□□ -1.75
RIB4	YOL143C	NDT80	P38830	627 aa		4.1	□□□□□ -1.75
RIB4	YOL143C	SAP4	P53036	818 aa		4.1	□□□□□ -1.75
RIB4	YOL143C	LIF1	P53150	421 aa		4.1	□□□□□ -1.75
RIB4	YOL143C	PEX8	P53248	589 aa		4.1	□□□□□ -1.75
RIB4	YOL143C	COQ6	P53318	479 aa		4.1	□□□□□ -1.75
RIB4	YOL143C	YDR341C	Q05506	607 aa	Known RBP	4.1	□□□□□ -1.75
RIB4	YOL143C	THI7	Q05998	598 aa		4.1	□□□□□ -1.75
RIB4	YOL143C	ICL2	Q12031	575 aa		4.1	□□□□□ -1.75
RIB4	YOL143C	NUR1	Q12066	484 aa		4.1	□□□□□ -1.75
RIB4	YOL143C	DBP10	Q12389	995 aa	Known RBP	4.1	□□□□□ -1.75
RIB4	YOL143C	ERP3	Q12403	225 aa		4.1	□□□□□ -1.75
RIB4	YOL143C	PMA2	P19657	947 aa		4.09	□□□□□ -1.75
RIB4	YOL143C	TKL1	P23254	680 aa	Known RBP	4.09	□□□□□ -1.75
RIB4	YOL143C	PHO3	P24031	467 aa		4.09	□□□□□ -1.75
RIB4	YOL143C	SWI4	P25302	1093 aa	Known RBP	4.09	□□□□□ -1.75
RIB4	YOL143C	PET309	P32522	965 aa	Predicted RBP	4.09	□□□□□ -1.75
RIB4	YOL143C	PAH1	P32567	862 aa		4.09	□□□□□ -1.75
RIB4	YOL143C	RGT1	P32862	1170 aa		4.09	□□□□□ -1.75
RIB4	YOL143C	BMH2	P34730	273 aa	Known RBP	4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 61.1 ms