RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUB1	YNL016W	RPB2	P08518	1224 aa	Known RBP	4.12	□□□□□ -1.75
PUB1	YNL016W	CDC24	P11433	854 aa	Predicted RBP	4.12	□□□□□ -1.75
PUB1	YNL016W	RIT1	P23796	513 aa		4.12	□□□□□ -1.75
PUB1	YNL016W	GCS1	P35197	352 aa		4.12	□□□□□ -1.75
PUB1	YNL016W	SWH1	P35845	1188 aa		4.12	□□□□□ -1.75
PUB1	YNL016W	SAP190	P36123	1033 aa		4.12	□□□□□ -1.75
PUB1	YNL016W	KAE1	P36132	386 aa		4.12	□□□□□ -1.75
PUB1	YNL016W	TIF4631	P39935	952 aa	Known RBP	4.12	□□□□□ -1.75
PUB1	YNL016W	THI6	P41835	540 aa		4.12	□□□□□ -1.75
PUB1	YNL016W	SHE10	P53075	577 aa		4.12	□□□□□ -1.75
PUB1	YNL016W	JJJ1	P53863	590 aa		4.12	□□□□□ -1.75
PUB1	YNL016W	RCO1	Q04779	684 aa		4.12	□□□□□ -1.75
PUB1	YNL016W	STP4	Q07351	490 aa		4.12	□□□□□ -1.75
PUB1	YNL016W	CRD1	Q07560	283 aa		4.12	□□□□□ -1.75
PUB1	YNL016W	RSB1	Q08417	382 aa		4.12	□□□□□ -1.75
PUB1	YNL016W	HRK1	Q08732	759 aa	Known RBP	4.12	□□□□□ -1.75
PUB1	YNL016W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
PUB1	YNL016W	HUA2	Q12134	243 aa		4.12	□□□□□ -1.75
PUB1	YNL016W	GET3	Q12154	354 aa	Known RBP	4.12	□□□□□ -1.75
PUB1	YNL016W	NBP2	Q12163	236 aa		4.12	□□□□□ -1.75
PUB1	YNL016W	YLL054C	Q12244	843 aa		4.12	□□□□□ -1.75
PUB1	YNL016W	YOL159C-A	Q3E769	90 aa		4.12	□□□□□ -1.75
PUB1	YNL016W	TPK1	P06244	397 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	KRS1	P15180	591 aa	Known RBP	4.11	□□□□□ -1.75
PUB1	YNL016W	CLB1	P24868	471 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	IMG2	P25642	146 aa	Predicted RBP	4.11	□□□□□ -1.75
PUB1	YNL016W	CAP1	P28495	268 aa	Known RBP	4.11	□□□□□ -1.75
PUB1	YNL016W	MRP20	P32387	263 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	SMI1	P32566	505 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	RGT1	P32862	1170 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	STB6	P36085	766 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	LAS1	P36146	502 aa	Predicted RBP	4.11	□□□□□ -1.75
PUB1	YNL016W	SIF2	P38262	535 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	GND1	P38720	489 aa	Known RBP	4.11	□□□□□ -1.75
PUB1	YNL016W	MIP6	P38760	659 aa	Known RBP	4.11	□□□□□ -1.75
PUB1	YNL016W	RTS1	P38903	757 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	MET18	P40469	1032 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	NAS2	P40555	220 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	GCD10	P41814	478 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	CCT7	P42943	550 aa	Known RBP	4.11	□□□□□ -1.75
PUB1	YNL016W	YJL045W	P47052	634 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	NOP9	P47077	666 aa	Known RBP	4.11	□□□□□ -1.75
PUB1	YNL016W	HFM1	P51979	1187 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	ART5	P53244	586 aa	Known RBP	4.11	□□□□□ -1.75
PUB1	YNL016W	TNA1	P53322	534 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	OGG1	P53397	376 aa	Predicted RBP	4.11	□□□□□ -1.75
PUB1	YNL016W	NCE103	P53615	221 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	ALF1	P53904	254 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	EOS1	P53938	366 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	YKR011C	Q02209	353 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	LEE1	Q02799	301 aa	Known RBP	4.11	□□□□□ -1.75
PUB1	YNL016W	NGL3	Q03210	505 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	YMR210W	Q03649	449 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	YAP6	Q03935	383 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	YMR111C	Q04461	462 aa	Predicted RBP	4.11	□□□□□ -1.75
PUB1	YNL016W	MGR3	Q04472	501 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	DUS4	Q06063	367 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	YPS7	Q06325	596 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	YOR022C	Q12204	715 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	FAB1	P34756	2278 aa		4.11	□□□□□ -1.75
PUB1	YNL016W	PRC1	P00729	532 aa		4.1	□□□□□ -1.75
PUB1	YNL016W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
PUB1	YNL016W	CWH43	P25618	953 aa		4.1	□□□□□ -1.75
PUB1	YNL016W	COQ2	P32378	372 aa		4.1	□□□□□ -1.75
PUB1	YNL016W	ARP2	P32381	391 aa	Known RBP	4.1	□□□□□ -1.75
PUB1	YNL016W	GYP6	P32806	458 aa		4.1	□□□□□ -1.75
PUB1	YNL016W	PPQ1	P32945	549 aa		4.1	□□□□□ -1.75
PUB1	YNL016W	MIC60	P36112	540 aa		4.1	□□□□□ -1.75
PUB1	YNL016W	CST26	P38226	397 aa		4.1	□□□□□ -1.75
PUB1	YNL016W	SMF1	P38925	575 aa		4.1	□□□□□ -1.75
PUB1	YNL016W	LYS9	P38999	446 aa		4.1	□□□□□ -1.75
PUB1	YNL016W	ROK1	P45818	564 aa	Predicted RBP	4.1	□□□□□ -1.75
PUB1	YNL016W	TEL2	P53038	688 aa		4.1	□□□□□ -1.75
PUB1	YNL016W	PEF1	P53238	335 aa		4.1	□□□□□ -1.75
PUB1	YNL016W	SOK2	P53438	785 aa	Predicted RBP	4.1	□□□□□ -1.75
PUB1	YNL016W	TOF1	P53840	1238 aa		4.1	□□□□□ -1.75
PUB1	YNL016W	CSL4	P53859	292 aa	Predicted RBP	4.1	□□□□□ -1.75
PUB1	YNL016W	BNI5	P53890	448 aa	Known RBP	4.1	□□□□□ -1.75
PUB1	YNL016W	YML037C	Q03703	340 aa		4.1	□□□□□ -1.75
PUB1	YNL016W	YPR196W	Q06595	470 aa		4.1	□□□□□ -1.75
PUB1	YNL016W	RCN2	Q12044	265 aa		4.1	□□□□□ -1.75
PUB1	YNL016W	YOR111W	Q99210	232 aa		4.1	□□□□□ -1.75
PUB1	YNL016W	NUM1	Q00402	2748 aa		4.1	□□□□□ -1.75
PUB1	YNL016W	ECM29	P38737	1868 aa		4.09	□□□□□ -1.75
PUB1	YNL016W	RPS9A	O13516	197 aa	Known RBP	4.09	□□□□□ -1.75
PUB1	YNL016W	URA3	P03962	267 aa		4.09	□□□□□ -1.75
PUB1	YNL016W	NOT3	P06102	836 aa	Known RBP	4.09	□□□□□ -1.75
PUB1	YNL016W	SAC7	P17121	654 aa		4.09	□□□□□ -1.75
PUB1	YNL016W	IME1	P21190	360 aa		4.09	□□□□□ -1.75
PUB1	YNL016W	PRP28	P23394	588 aa		4.09	□□□□□ -1.75
PUB1	YNL016W	YEL043W	P32618	956 aa		4.09	□□□□□ -1.75
PUB1	YNL016W	YSC84	P32793	468 aa		4.09	□□□□□ -1.75
PUB1	YNL016W	LRG1	P35688	1017 aa		4.09	□□□□□ -1.75
PUB1	YNL016W	RMA1	P36001	430 aa	Known RBP	4.09	□□□□□ -1.75
PUB1	YNL016W	POA1	P38218	177 aa		4.09	□□□□□ -1.75
PUB1	YNL016W	ALG14	P38242	237 aa		4.09	□□□□□ -1.75
PUB1	YNL016W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
PUB1	YNL016W	YEL057C	P39983	233 aa		4.09	□□□□□ -1.75
PUB1	YNL016W	BUD16	P39988	312 aa		4.09	□□□□□ -1.75
PUB1	YNL016W	YIL161W	P40449	235 aa	Known RBP	4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms