RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C PHM8P40025 321 aa5.61□□□□□ -1.51
PEX12YMR026C CFD1P40558 293 aa5.61□□□□□ -1.51
PEX12YMR026C YGR021WP53212 290 aa5.61□□□□□ -1.51
PEX12YMR026C GET3Q12154 354 aaKnown RBP5.61□□□□□ -1.51
PEX12YMR026C PCD1Q12524 340 aa5.61□□□□□ -1.51
PEX12YMR026C TPK1P06244 397 aa5.6□□□□□ -1.51
PEX12YMR026C PCT1P13259 424 aa5.6□□□□□ -1.51
PEX12YMR026C MSS51P32335 436 aa5.6□□□□□ -1.51
PEX12YMR026C FUI1P38196 639 aa5.6□□□□□ -1.51
PEX12YMR026C YIL024CP40543 189 aa5.6□□□□□ -1.51
PEX12YMR026C CDC1P40986 491 aa5.6□□□□□ -1.51
PEX12YMR026C YJL107CP42947 387 aa5.6□□□□□ -1.51
PEX12YMR026C GLO1P50107 326 aa5.6□□□□□ -1.51
PEX12YMR026C CSR1Q06705 408 aaKnown RBP5.6□□□□□ -1.51
PEX12YMR026C PFA4Q12006 378 aa5.6□□□□□ -1.51
PEX12YMR026C ARN1P38731 627 aa5.59□□□□□ -1.51
PEX12YMR026C JHD1P40034 492 aa5.59□□□□□ -1.51
PEX12YMR026C CTF18P49956 741 aa5.59□□□□□ -1.51
PEX12YMR026C COG1P53079 417 aa5.59□□□□□ -1.51
PEX12YMR026C GAL4P04386 881 aa5.58□□□□□ -1.52
PEX12YMR026C TY2A-LR1P0C2J4 438 aa5.58□□□□□ -1.52
PEX12YMR026C TY2A-FP0CX61 438 aa5.58□□□□□ -1.52
PEX12YMR026C TY2A-GR2P0CX62 438 aa5.58□□□□□ -1.52
PEX12YMR026C TY2A-CP25383 438 aa5.58□□□□□ -1.52
PEX12YMR026C RAD16P31244 790 aa5.58□□□□□ -1.52
PEX12YMR026C PSY4P38193 441 aa5.58□□□□□ -1.52
PEX12YMR026C ASG1P40467 964 aa5.58□□□□□ -1.52
PEX12YMR026C MNT3P40549 630 aa5.58□□□□□ -1.52
PEX12YMR026C ASE1P50275 885 aa5.58□□□□□ -1.52
PEX12YMR026C DCP2P53550 970 aaKnown RBP5.58□□□□□ -1.52
PEX12YMR026C TY2A-DR2Q03483 438 aa5.58□□□□□ -1.52
PEX12YMR026C TMA16Q08687 178 aa5.58□□□□□ -1.52
PEX12YMR026C TY2A-BQ12260 438 aa5.58□□□□□ -1.52
PEX12YMR026C TY2A-OR2Q12293 438 aa5.58□□□□□ -1.52
PEX12YMR026C ICT1Q12385 394 aa5.58□□□□□ -1.52
PEX12YMR026C TY2A-DR1Q12392 438 aa5.58□□□□□ -1.52
PEX12YMR026C TY2A-OR1Q12439 438 aa5.58□□□□□ -1.52
PEX12YMR026C TY2A-DR3Q99303 438 aa5.58□□□□□ -1.52
PEX12YMR026C SSM4P40318 1319 aa5.57□□□□□ -1.52
PEX12YMR026C SUI3P09064 285 aaKnown RBP5.57□□□□□ -1.52
PEX12YMR026C GAT1P43574 510 aa5.57□□□□□ -1.52
PEX12YMR026C BNA1P47096 177 aa5.57□□□□□ -1.52
PEX12YMR026C PSP1P50896 841 aaKnown RBP5.57□□□□□ -1.52
PEX12YMR026C RRT6P53117 311 aaPredicted RBP5.57□□□□□ -1.52
PEX12YMR026C GTR1Q00582 310 aa5.57□□□□□ -1.52
PEX12YMR026C PDR8Q06149 701 aa5.57□□□□□ -1.52
PEX12YMR026C SWA2Q06677 668 aa5.57□□□□□ -1.52
PEX12YMR026C YER190C-BP0CX94 160 aa5.56□□□□□ -1.52
PEX12YMR026C YEL077W-AP0CX95 160 aa5.56□□□□□ -1.52
PEX12YMR026C YGR296C-BP0CX96 160 aa5.56□□□□□ -1.52
PEX12YMR026C YPL283W-BP0CX97 160 aa5.56□□□□□ -1.52
PEX12YMR026C YPR204C-AP0CX98 160 aa5.56□□□□□ -1.52
PEX12YMR026C PFK2P16862 959 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
PEX12YMR026C IST3P40565 148 aaPredicted RBP5.56□□□□□ -1.52
PEX12YMR026C RGT2Q12300 763 aa5.56□□□□□ -1.52
PEX12YMR026C YPR089WO13585 888 aa5.55□□□□□ -1.52
PEX12YMR026C TMT1P32643 299 aa5.55□□□□□ -1.52
PEX12YMR026C OCT1P35999 772 aa5.55□□□□□ -1.52
PEX12YMR026C FLO5P38894 1075 aa5.55□□□□□ -1.52
PEX12YMR026C TPA1P40032 644 aaKnown RBP5.55□□□□□ -1.52
PEX12YMR026C TRM8Q12009 286 aa5.55□□□□□ -1.52
PEX12YMR026C RRI1Q12468 440 aa5.55□□□□□ -1.52
PEX12YMR026C SNF1P06782 633 aaKnown RBP5.54□□□□□ -1.52
PEX12YMR026C MRP2P10663 115 aaPredicted RBP5.54□□□□□ -1.52
PEX12YMR026C SRP54P20424 541 aaKnown RBP5.54□□□□□ -1.52
PEX12YMR026C CNA1P23287 553 aa5.54□□□□□ -1.52
PEX12YMR026C RPT3P33298 428 aaKnown RBP5.54□□□□□ -1.52
PEX12YMR026C TEF4P36008 412 aaKnown RBP5.54□□□□□ -1.52
PEX12YMR026C UME6P39001 836 aa5.54□□□□□ -1.52
PEX12YMR026C SNM1P40993 198 aa5.54□□□□□ -1.52
PEX12YMR026C CRN1Q06440 651 aa5.54□□□□□ -1.52
PEX12YMR026C GEP3Q08622 556 aa5.54□□□□□ -1.52
PEX12YMR026C YCR006CP25350 157 aa5.53□□□□□ -1.52
PEX12YMR026C ADE17P38009 592 aaKnown RBP5.53□□□□□ -1.52
PEX12YMR026C UBP13P38187 747 aa5.53□□□□□ -1.52
PEX12YMR026C TOM71P38825 639 aaKnown RBP5.53□□□□□ -1.52
PEX12YMR026C PCI8P40512 444 aa5.53□□□□□ -1.52
PEX12YMR026C SEC5P89102 971 aa5.53□□□□□ -1.52
PEX12YMR026C VTC3Q02725 835 aa5.53□□□□□ -1.52
PEX12YMR026C VID22Q05934 901 aa5.53□□□□□ -1.52
PEX12YMR026C PIG1Q06216 648 aa5.53□□□□□ -1.52
PEX12YMR026C MCH4Q08268 501 aa5.53□□□□□ -1.52
PEX12YMR026C ERG27Q12452 347 aaKnown RBP5.53□□□□□ -1.52
PEX12YMR026C TRX2P22803 104 aaKnown RBP5.52□□□□□ -1.53
PEX12YMR026C TFC3P34111 1160 aa5.52□□□□□ -1.53
PEX12YMR026C SPC97P38863 823 aa5.52□□□□□ -1.53
PEX12YMR026C YMR124WP39523 943 aaKnown RBP5.52□□□□□ -1.53
PEX12YMR026C IML2P47031 731 aa5.52□□□□□ -1.53
PEX12YMR026C EAF7P53911 425 aaKnown RBP5.52□□□□□ -1.53
PEX12YMR026C RPL15BP54780 204 aaPredicted RBP5.52□□□□□ -1.53
PEX12YMR026C ECM22Q05958 814 aaPredicted RBP5.52□□□□□ -1.53
PEX12YMR026C YAP7Q08182 245 aa5.52□□□□□ -1.53
PEX12YMR026C HER1Q12276 1246 aa5.52□□□□□ -1.53
PEX12YMR026C SRB5P32585 307 aa5.51□□□□□ -1.53
PEX12YMR026C NTR2P36118 322 aaPredicted RBP5.51□□□□□ -1.53
PEX12YMR026C AAP1P37898 856 aaKnown RBP5.51□□□□□ -1.53
PEX12YMR026C VPS41P38959 992 aa5.51□□□□□ -1.53
PEX12YMR026C SWP82P43554 623 aa5.51□□□□□ -1.53
PEX12YMR026C REG1Q00816 1014 aa5.51□□□□□ -1.53
PEX12YMR026C MRPL1Q04599 285 aa5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms