RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeast

Gene VPS71, Length 843 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS71	YML041C	YER175W-A	Q8TGU4	54 aa		4.81	□□□□□ -1.64
VPS71	YML041C	HSH49	Q99181	213 aa	Predicted RBP	4.81	□□□□□ -1.64
VPS71	YML041C	SUI3	P09064	285 aa	Known RBP	4.8	□□□□□ -1.64
VPS71	YML041C	SRP54	P20424	541 aa	Known RBP	4.8	□□□□□ -1.64
VPS71	YML041C	ALY1	P36117	915 aa		4.8	□□□□□ -1.64
VPS71	YML041C	PHM8	P40025	321 aa		4.8	□□□□□ -1.64
VPS71	YML041C	YIL161W	P40449	235 aa	Known RBP	4.8	□□□□□ -1.64
VPS71	YML041C	DJP1	P40564	432 aa		4.8	□□□□□ -1.64
VPS71	YML041C	STB4	P50104	949 aa		4.8	□□□□□ -1.64
VPS71	YML041C	YGR079W	P53249	370 aa		4.8	□□□□□ -1.64
VPS71	YML041C	TAF11	Q04226	346 aa		4.8	□□□□□ -1.64
VPS71	YML041C	YLR352W	Q06479	807 aa		4.8	□□□□□ -1.64
VPS71	YML041C	GRC3	Q07845	632 aa		4.8	□□□□□ -1.64
VPS71	YML041C	CRT10	Q08226	957 aa		4.8	□□□□□ -1.64
VPS71	YML041C	HUA2	Q12134	243 aa		4.8	□□□□□ -1.64
VPS71	YML041C	SNU66	Q12420	587 aa	Predicted RBP	4.8	□□□□□ -1.64
VPS71	YML041C	ERG27	Q12452	347 aa	Known RBP	4.8	□□□□□ -1.64
VPS71	YML041C	GCN4	P03069	281 aa		4.79	□□□□□ -1.64
VPS71	YML041C	PCT1	P13259	424 aa		4.79	□□□□□ -1.64
VPS71	YML041C	YCK1	P23291	538 aa		4.79	□□□□□ -1.64
VPS71	YML041C	CDC60	P26637	1090 aa	Known RBP	4.79	□□□□□ -1.64
VPS71	YML041C	YJU2	P28320	278 aa	Predicted RBP	4.79	□□□□□ -1.64
VPS71	YML041C	FLC2	P39719	783 aa		4.79	□□□□□ -1.64
VPS71	YML041C	TPA1	P40032	644 aa	Known RBP	4.79	□□□□□ -1.64
VPS71	YML041C	LAS21	P40367	830 aa		4.79	□□□□□ -1.64
VPS71	YML041C	NPA3	P47122	385 aa		4.79	□□□□□ -1.64
VPS71	YML041C	MSE1	P48525	536 aa		4.79	□□□□□ -1.64
VPS71	YML041C	INA17	Q02888	182 aa		4.79	□□□□□ -1.64
VPS71	YML041C	SYF1	Q04048	859 aa	Predicted RBP	4.79	□□□□□ -1.64
VPS71	YML041C	RAD33	Q04231	177 aa		4.79	□□□□□ -1.64
VPS71	YML041C	HRD3	Q05787	833 aa		4.79	□□□□□ -1.64
VPS71	YML041C	UTP21	Q06078	939 aa	Predicted RBP	4.79	□□□□□ -1.64
VPS71	YML041C	CIR2	Q08822	631 aa		4.79	□□□□□ -1.64
VPS71	YML041C	PGA3	Q12746	312 aa	Known RBP	4.79	□□□□□ -1.64
VPS71	YML041C	COX1	P00401	534 aa		4.78	□□□□□ -1.64
VPS71	YML041C	SEC53	P07283	254 aa	Known RBP	4.78	□□□□□ -1.64
VPS71	YML041C	RNR3	P21672	869 aa	Known RBP	4.78	□□□□□ -1.64
VPS71	YML041C	RFA2	P26754	273 aa	Known RBP	4.78	□□□□□ -1.64
VPS71	YML041C	SWI3	P32591	825 aa		4.78	□□□□□ -1.64
VPS71	YML041C	GDA1	P32621	518 aa		4.78	□□□□□ -1.64
VPS71	YML041C	SDS3	P40505	327 aa		4.78	□□□□□ -1.64
VPS71	YML041C	CIR1	P42940	261 aa		4.78	□□□□□ -1.64
VPS71	YML041C	VPS75	P53853	264 aa		4.78	□□□□□ -1.64
VPS71	YML041C	UBP16	Q02863	499 aa		4.78	□□□□□ -1.64
VPS71	YML041C	NGL3	Q03210	505 aa		4.78	□□□□□ -1.64
VPS71	YML041C	YMR206W	Q03695	313 aa		4.78	□□□□□ -1.64
VPS71	YML041C	RCF1	Q03713	159 aa		4.78	□□□□□ -1.64
VPS71	YML041C	RAD30	Q04049	632 aa		4.78	□□□□□ -1.64
VPS71	YML041C	MFB1	Q04922	465 aa		4.78	□□□□□ -1.64
VPS71	YML041C	RIX7	Q07844	837 aa	Known RBP	4.78	□□□□□ -1.64
VPS71	YML041C	RRG1	Q12167	365 aa	Predicted RBP	4.78	□□□□□ -1.64
VPS71	YML041C	YBR126W-A	Q8TGU7	68 aa		4.78	□□□□□ -1.64
VPS71	YML041C	AI5_ALPHA	Q9ZZX1	630 aa		4.78	□□□□□ -1.64
VPS71	YML041C	HSP82	P02829	709 aa	Known RBP	4.77	□□□□□ -1.65
VPS71	YML041C	SES1	P07284	462 aa	Known RBP	4.77	□□□□□ -1.65
VPS71	YML041C	PMA2	P19657	947 aa		4.77	□□□□□ -1.65
VPS71	YML041C	RRP43	P25359	394 aa	Predicted RBP	4.77	□□□□□ -1.65
VPS71	YML041C	PFK26	P40433	827 aa	Known RBP	4.77	□□□□□ -1.65
VPS71	YML041C	IME4	P41833	600 aa		4.77	□□□□□ -1.65
VPS71	YML041C	TDA10	P42938	290 aa		4.77	□□□□□ -1.65
VPS71	YML041C	SWP82	P43554	623 aa		4.77	□□□□□ -1.65
VPS71	YML041C	RPN11	P43588	306 aa	Known RBP	4.77	□□□□□ -1.65
VPS71	YML041C	MRX6	P48564	524 aa		4.77	□□□□□ -1.65
VPS71	YML041C	ARG7	Q04728	441 aa		4.77	□□□□□ -1.65
VPS71	YML041C	GPN2	Q08726	347 aa	Predicted RBP	4.77	□□□□□ -1.65
VPS71	YML041C	YOR111W	Q99210	232 aa		4.77	□□□□□ -1.65
VPS71	YML041C	YOR019W	Q99248	730 aa		4.77	□□□□□ -1.65
VPS71	YML041C	TPK2	P06245	380 aa		4.76	□□□□□ -1.65
VPS71	YML041C	RED1	P14291	827 aa		4.76	□□□□□ -1.65
VPS71	YML041C	CKA1	P15790	372 aa		4.76	□□□□□ -1.65
VPS71	YML041C	OPI1	P21957	404 aa		4.76	□□□□□ -1.65
VPS71	YML041C	VMA8	P32610	256 aa	Known RBP	4.76	□□□□□ -1.65
VPS71	YML041C	EMP70	P32802	667 aa		4.76	□□□□□ -1.65
VPS71	YML041C	RPF2	P36160	344 aa	Known RBP	4.76	□□□□□ -1.65
VPS71	YML041C	YBL029W	P38201	376 aa		4.76	□□□□□ -1.65
VPS71	YML041C	VBA2	P38358	474 aa	Known RBP	4.76	□□□□□ -1.65
VPS71	YML041C	GPD2	P41911	440 aa	Known RBP	4.76	□□□□□ -1.65
VPS71	YML041C	YFL015C	P43578	164 aa		4.76	□□□□□ -1.65
VPS71	YML041C	YGL036W	P53185	909 aa	Predicted RBP	4.76	□□□□□ -1.65
VPS71	YML041C	CTF4	Q01454	927 aa		4.76	□□□□□ -1.65
VPS71	YML041C	RPT6	Q01939	405 aa	Known RBP	4.76	□□□□□ -1.65
VPS71	YML041C	YPL191C	Q08930	360 aa		4.76	□□□□□ -1.65
VPS71	YML041C	SPE4	Q12455	300 aa		4.76	□□□□□ -1.65
VPS71	YML041C	NOP58	Q12499	511 aa	Known RBP	4.76	□□□□□ -1.65
VPS71	YML041C	ARG3	P05150	338 aa		4.75	□□□□□ -1.65
VPS71	YML041C	RPL7A	P05737	244 aa	Known RBP	4.75	□□□□□ -1.65
VPS71	YML041C	KES1	P35844	434 aa	Known RBP	4.75	□□□□□ -1.65
VPS71	YML041C	UBP13	P38187	747 aa		4.75	□□□□□ -1.65
VPS71	YML041C	YNG2	P38806	282 aa	Known RBP	4.75	□□□□□ -1.65
VPS71	YML041C	LNP1	P38878	278 aa		4.75	□□□□□ -1.65
VPS71	YML041C	SAP1	P39955	897 aa	Known RBP	4.75	□□□□□ -1.65
VPS71	YML041C	SEC24	P40482	926 aa	Known RBP	4.75	□□□□□ -1.65
VPS71	YML041C	ASN1	P49089	572 aa	Known RBP	4.75	□□□□□ -1.65
VPS71	YML041C	LYS4	P49367	693 aa	Predicted RBP	4.75	□□□□□ -1.65
VPS71	YML041C	YML6	P51998	286 aa		4.75	□□□□□ -1.65
VPS71	YML041C	RSC1	P53236	928 aa		4.75	□□□□□ -1.65
VPS71	YML041C	YGR250C	P53316	781 aa	Known RBP	4.75	□□□□□ -1.65
VPS71	YML041C	WAR1	Q03631	944 aa		4.75	□□□□□ -1.65
VPS71	YML041C	GIS1	Q03833	894 aa		4.75	□□□□□ -1.65
VPS71	YML041C	TMN2	Q04562	672 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 197.5 ms