RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C SWI4P25302 1093 aaKnown RBP4.54□□□□□ -1.68
USB1YLR132C RPT3P33298 428 aaKnown RBP4.54□□□□□ -1.68
USB1YLR132C KAP123P40069 1113 aaKnown RBP4.54□□□□□ -1.68
USB1YLR132C ERR3P42222 437 aa4.54□□□□□ -1.68
USB1YLR132C COG2P53271 262 aa4.54□□□□□ -1.68
USB1YLR132C YNL058CP53947 316 aa4.54□□□□□ -1.68
USB1YLR132C YRF1-2P40105 1681 aa4.54□□□□□ -1.68
USB1YLR132C RPL7AP05737 244 aaKnown RBP4.53□□□□□ -1.68
USB1YLR132C SSH4P32343 579 aa4.53□□□□□ -1.68
USB1YLR132C RPF2P36160 344 aaKnown RBP4.53□□□□□ -1.68
USB1YLR132C YPT10P38146 199 aa4.53□□□□□ -1.68
USB1YLR132C LTP1P40347 161 aa4.53□□□□□ -1.68
USB1YLR132C BST1P43571 1029 aa4.53□□□□□ -1.68
USB1YLR132C ZAP1P47043 880 aa4.53□□□□□ -1.68
USB1YLR132C CIA1Q05583 330 aa4.53□□□□□ -1.68
USB1YLR132C CSR1Q06705 408 aaKnown RBP4.53□□□□□ -1.68
USB1YLR132C RPL7BQ12213 244 aaKnown RBP4.53□□□□□ -1.68
USB1YLR132C AHA1Q12449 350 aaKnown RBP4.53□□□□□ -1.68
USB1YLR132C RVB2Q12464 471 aaKnown RBP4.53□□□□□ -1.68
USB1YLR132C YBR255C-AQ3E776 120 aa4.53□□□□□ -1.68
USB1YLR132C PDR5P33302 1511 aaKnown RBP4.52□□□□□ -1.69
USB1YLR132C TPK1P06244 397 aa4.52□□□□□ -1.69
USB1YLR132C HEM1P09950 548 aaPredicted RBP4.52□□□□□ -1.69
USB1YLR132C MTF2P10849 440 aa4.52□□□□□ -1.69
USB1YLR132C NCP1P16603 691 aaKnown RBP4.52□□□□□ -1.69
USB1YLR132C KGD2P19262 463 aaPredicted RBP4.52□□□□□ -1.69
USB1YLR132C UBC1P21734 215 aaKnown RBP4.52□□□□□ -1.69
USB1YLR132C MBR1P23493 339 aa4.52□□□□□ -1.69
USB1YLR132C SLC1P33333 303 aa4.52□□□□□ -1.69
USB1YLR132C TEF4P36008 412 aaKnown RBP4.52□□□□□ -1.69
USB1YLR132C FUN12P39730 1002 aaKnown RBP4.52□□□□□ -1.69
USB1YLR132C XBP1P40489 647 aa4.52□□□□□ -1.69
USB1YLR132C ARC35P53731 342 aaKnown RBP4.52□□□□□ -1.69
USB1YLR132C SEC5P89102 971 aa4.52□□□□□ -1.69
USB1YLR132C GTR1Q00582 310 aa4.52□□□□□ -1.69
USB1YLR132C MTG1Q03151 367 aaPredicted RBP4.52□□□□□ -1.69
USB1YLR132C YMR018WQ04364 514 aa4.52□□□□□ -1.69
USB1YLR132C PDR11P40550 1411 aa4.52□□□□□ -1.69
USB1YLR132C LEU2P04173 364 aaPredicted RBP4.51□□□□□ -1.69
USB1YLR132C CHO2P05374 869 aaKnown RBP4.51□□□□□ -1.69
USB1YLR132C PMA2P19657 947 aa4.51□□□□□ -1.69
USB1YLR132C APN1P22936 367 aa4.51□□□□□ -1.69
USB1YLR132C PTP1P25044 335 aa4.51□□□□□ -1.69
USB1YLR132C RER1P25560 188 aa4.51□□□□□ -1.69
USB1YLR132C AAD3P25612 363 aa4.51□□□□□ -1.69
USB1YLR132C BEM3P32873 1128 aa4.51□□□□□ -1.69
USB1YLR132C RPC34P32910 317 aa4.51□□□□□ -1.69
USB1YLR132C HOT13P36078 116 aa4.51□□□□□ -1.69
USB1YLR132C EXO84P38261 753 aa4.51□□□□□ -1.69
USB1YLR132C YBR138CP38277 524 aa4.51□□□□□ -1.69
USB1YLR132C UBX6P47049 396 aa4.51□□□□□ -1.69
USB1YLR132C UBP16Q02863 499 aa4.51□□□□□ -1.69
USB1YLR132C YML131WQ03102 365 aa4.51□□□□□ -1.69
USB1YLR132C BI2P03873 423 aa4.5□□□□□ -1.69
USB1YLR132C SPO16P17122 198 aa4.5□□□□□ -1.69
USB1YLR132C CNS1P33313 385 aa4.5□□□□□ -1.69
USB1YLR132C ARO9P38840 513 aaPredicted RBP4.5□□□□□ -1.69
USB1YLR132C YIL161WP40449 235 aaKnown RBP4.5□□□□□ -1.69
USB1YLR132C GAT1P43574 510 aa4.5□□□□□ -1.69
USB1YLR132C NET1P47035 1189 aa4.5□□□□□ -1.69
USB1YLR132C ATG23Q06671 453 aa4.5□□□□□ -1.69
USB1YLR132C COX17Q12287 69 aa4.5□□□□□ -1.69
USB1YLR132C SUL2Q12325 893 aa4.5□□□□□ -1.69
USB1YLR132C ATP2P00830 511 aaKnown RBP4.49□□□□□ -1.69
USB1YLR132C IST3P40565 148 aaPredicted RBP4.49□□□□□ -1.69
USB1YLR132C CIR1P42940 261 aa4.49□□□□□ -1.69
USB1YLR132C YFL015CP43578 164 aa4.49□□□□□ -1.69
USB1YLR132C YJL043WP47053 257 aa4.49□□□□□ -1.69
USB1YLR132C YDL242WQ07746 117 aa4.49□□□□□ -1.69
USB1YLR132C YPL191CQ08930 360 aa4.49□□□□□ -1.69
USB1YLR132C PNO1Q99216 274 aaKnown RBP4.49□□□□□ -1.69
USB1YLR132C AI5_ALPHAQ9ZZX1 630 aa4.49□□□□□ -1.69
USB1YLR132C CFT1Q06632 1357 aaKnown RBP4.49□□□□□ -1.69
USB1YLR132C GCN2P15442 1659 aa4.48□□□□□ -1.69
USB1YLR132C GDA1P32621 518 aa4.48□□□□□ -1.69
USB1YLR132C RRN3P36070 627 aa4.48□□□□□ -1.69
USB1YLR132C APD1P38281 316 aa4.48□□□□□ -1.69
USB1YLR132C CTF18P49956 741 aa4.48□□□□□ -1.69
USB1YLR132C PLM2Q04383 521 aa4.48□□□□□ -1.69
USB1YLR132C YML053CQ04978 212 aa4.48□□□□□ -1.69
USB1YLR132C OPY2Q06810 360 aa4.48□□□□□ -1.69
USB1YLR132C ERG27Q12452 347 aaKnown RBP4.48□□□□□ -1.69
USB1YLR132C RRP5Q05022 1729 aaKnown RBP4.48□□□□□ -1.69
USB1YLR132C AMD2P22580 549 aa4.47□□□□□ -1.69
USB1YLR132C URK1P27515 501 aa4.47□□□□□ -1.69
USB1YLR132C EXO1P39875 702 aa4.47□□□□□ -1.69
USB1YLR132C RIC1P40395 1056 aa4.47□□□□□ -1.69
USB1YLR132C ASE1P50275 885 aa4.47□□□□□ -1.69
USB1YLR132C COG1P53079 417 aa4.47□□□□□ -1.69
USB1YLR132C YML119WQ03208 357 aa4.47□□□□□ -1.69
USB1YLR132C GTB1Q04924 702 aa4.47□□□□□ -1.69
USB1YLR132C BUD21Q08492 214 aaPredicted RBP4.47□□□□□ -1.69
USB1YLR132C SSP2Q08646 371 aa4.47□□□□□ -1.69
USB1YLR132C MRN1Q08925 612 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
USB1YLR132C SWT1Q12104 458 aa4.47□□□□□ -1.69
USB1YLR132C LCB4Q12246 624 aa4.47□□□□□ -1.69
USB1YLR132C KRE5P22023 1365 aa4.46□□□□□ -1.7
USB1YLR132C ILV2P07342 687 aaKnown RBP4.46□□□□□ -1.7
USB1YLR132C IFA38P38286 347 aa4.46□□□□□ -1.7
USB1YLR132C DJP1P40564 432 aa4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms