RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W SQS1P53866 767 aaKnown RBP2.14□□□□□ -2.07
CFT2YLR115W RAD33Q04231 177 aa2.14□□□□□ -2.07
CFT2YLR115W BSP1Q06604 576 aa2.14□□□□□ -2.07
CFT2YLR115W IRC3Q06683 689 aa2.14□□□□□ -2.07
CFT2YLR115W CWC2Q12046 339 aaPredicted RBP2.14□□□□□ -2.07
CFT2YLR115W NOP58Q12499 511 aaKnown RBP2.14□□□□□ -2.07
CFT2YLR115W ENT1Q12518 454 aa2.14□□□□□ -2.07
CFT2YLR115W EDE1P34216 1381 aa2.13□□□□□ -2.07
CFT2YLR115W AEP2P22136 580 aa2.13□□□□□ -2.07
CFT2YLR115W PGS1P25578 521 aa2.13□□□□□ -2.07
CFT2YLR115W VMA8P32610 256 aaKnown RBP2.13□□□□□ -2.07
CFT2YLR115W SDH8P38345 138 aa2.13□□□□□ -2.07
CFT2YLR115W TIF5P38431 405 aaKnown RBP2.13□□□□□ -2.07
CFT2YLR115W SRP72P38688 640 aaKnown RBP2.13□□□□□ -2.07
CFT2YLR115W TIF4631P39935 952 aaKnown RBP2.13□□□□□ -2.07
CFT2YLR115W IES5P40060 125 aa2.13□□□□□ -2.07
CFT2YLR115W FAF1P40546 346 aaPredicted RBP2.13□□□□□ -2.07
CFT2YLR115W SEC27P41811 889 aaKnown RBP2.13□□□□□ -2.07
CFT2YLR115W YNR071CP53757 342 aa2.13□□□□□ -2.07
CFT2YLR115W YML131WQ03102 365 aa2.13□□□□□ -2.07
CFT2YLR115W ECM38Q05902 660 aaPredicted RBP2.13□□□□□ -2.07
CFT2YLR115W MLP2P40457 1679 aa2.13□□□□□ -2.07
CFT2YLR115W SSM4P40318 1319 aa2.13□□□□□ -2.07
CFT2YLR115W MAK32P23060 363 aa2.13□□□□□ -2.07
CFT2YLR115W PRP45P28004 379 aaPredicted RBP2.13□□□□□ -2.07
CFT2YLR115W MRPL9P31334 269 aa2.13□□□□□ -2.07
CFT2YLR115W HEM12P32347 362 aaPredicted RBP2.13□□□□□ -2.07
CFT2YLR115W YBR071WP38243 211 aa2.13□□□□□ -2.07
CFT2YLR115W RXT2P38255 430 aa2.13□□□□□ -2.07
CFT2YLR115W EXO84P38261 753 aa2.13□□□□□ -2.07
CFT2YLR115W NPR3P38742 1146 aa2.13□□□□□ -2.07
CFT2YLR115W OPT1P40897 799 aa2.13□□□□□ -2.07
CFT2YLR115W HEL2Q05580 639 aaKnown RBP2.13□□□□□ -2.07
CFT2YLR115W MLC2Q06580 163 aa2.13□□□□□ -2.07
CFT2YLR115W RRP6Q12149 733 aaKnown RBP2.13□□□□□ -2.07
CFT2YLR115W URA3P03962 267 aa2.12□□□□□ -2.07
CFT2YLR115W YMR085WP0CF18 432 aa2.12□□□□□ -2.07
CFT2YLR115W MRP7P12687 371 aa2.12□□□□□ -2.07
CFT2YLR115W COX11P19516 300 aaKnown RBP2.12□□□□□ -2.07
CFT2YLR115W AMD2P22580 549 aa2.12□□□□□ -2.07
CFT2YLR115W DBF4P32325 704 aa2.12□□□□□ -2.07
CFT2YLR115W GDA1P32621 518 aa2.12□□□□□ -2.07
CFT2YLR115W NUP120P35729 1037 aa2.12□□□□□ -2.07
CFT2YLR115W CAB3P36076 571 aa2.12□□□□□ -2.07
CFT2YLR115W VPS8P39702 1274 aa2.12□□□□□ -2.07
CFT2YLR115W COG6P53959 839 aa2.12□□□□□ -2.07
CFT2YLR115W YNL034WP53963 612 aa2.12□□□□□ -2.07
CFT2YLR115W IDP3P53982 420 aaKnown RBP2.12□□□□□ -2.07
CFT2YLR115W YML119WQ03208 357 aa2.12□□□□□ -2.07
CFT2YLR115W ORM2Q06144 216 aa2.12□□□□□ -2.07
CFT2YLR115W OPY2Q06810 360 aa2.12□□□□□ -2.07
CFT2YLR115W CYK3Q07533 885 aa2.12□□□□□ -2.07
CFT2YLR115W PDR12Q02785 1511 aa2.12□□□□□ -2.07
CFT2YLR115W KRR1P25586 316 aaPredicted RBP2.12□□□□□ -2.07
CFT2YLR115W RRP8P38961 392 aaKnown RBP2.12□□□□□ -2.07
CFT2YLR115W SNO3P43544 222 aa2.12□□□□□ -2.07
CFT2YLR115W MED1Q12321 566 aa2.12□□□□□ -2.07
CFT2YLR115W YRM1Q12340 786 aa2.12□□□□□ -2.07
CFT2YLR115W SNF2P22082 1703 aa2.12□□□□□ -2.07
CFT2YLR115W IQG1Q12280 1495 aa2.12□□□□□ -2.07
CFT2YLR115W YBT1P32386 1661 aa2.12□□□□□ -2.07
CFT2YLR115W GAL1P04385 528 aa2.11□□□□□ -2.07
CFT2YLR115W PIF1P07271 859 aa2.11□□□□□ -2.07
CFT2YLR115W YER190C-BP0CX94 160 aa2.11□□□□□ -2.07
CFT2YLR115W YEL077W-AP0CX95 160 aa2.11□□□□□ -2.07
CFT2YLR115W YGR296C-BP0CX96 160 aa2.11□□□□□ -2.07
CFT2YLR115W YPL283W-BP0CX97 160 aa2.11□□□□□ -2.07
CFT2YLR115W YPR204C-AP0CX98 160 aa2.11□□□□□ -2.07
CFT2YLR115W NAT1P12945 854 aaKnown RBP2.11□□□□□ -2.07
CFT2YLR115W RER1P25560 188 aa2.11□□□□□ -2.07
CFT2YLR115W MCM10P32354 571 aa2.11□□□□□ -2.07
CFT2YLR115W STB5P38699 743 aa2.11□□□□□ -2.07
CFT2YLR115W KEL2P50090 882 aa2.11□□□□□ -2.07
CFT2YLR115W OCA1P50946 238 aaPredicted RBP2.11□□□□□ -2.07
CFT2YLR115W YGR016WP53209 190 aa2.11□□□□□ -2.07
CFT2YLR115W TDA9Q04545 1251 aa2.11□□□□□ -2.07
CFT2YLR115W SSP2Q08646 371 aa2.11□□□□□ -2.07
CFT2YLR115W AHA1Q12449 350 aaKnown RBP2.11□□□□□ -2.07
CFT2YLR115W SMC6Q12749 1114 aa2.11□□□□□ -2.07
CFT2YLR115W PNO1Q99216 274 aaKnown RBP2.11□□□□□ -2.07
CFT2YLR115W YOL087CQ99247 1116 aa2.11□□□□□ -2.07
CFT2YLR115W BET2P20133 325 aa2.11□□□□□ -2.07
CFT2YLR115W DBF20P32328 564 aa2.11□□□□□ -2.07
CFT2YLR115W PLC1P32383 869 aa2.11□□□□□ -2.07
CFT2YLR115W PET309P32522 965 aaPredicted RBP2.11□□□□□ -2.07
CFT2YLR115W IMD2P38697 523 aaKnown RBP2.11□□□□□ -2.07
CFT2YLR115W PES4P39684 611 aa2.11□□□□□ -2.07
CFT2YLR115W STL1P39932 569 aa2.11□□□□□ -2.07
CFT2YLR115W ESL1P40456 1118 aa2.11□□□□□ -2.07
CFT2YLR115W HIS6P40545 261 aa2.11□□□□□ -2.07
CFT2YLR115W GPD2P41911 440 aaKnown RBP2.11□□□□□ -2.07
CFT2YLR115W IMD3P50095 523 aaKnown RBP2.11□□□□□ -2.07
CFT2YLR115W ERG13P54839 491 aaKnown RBP2.11□□□□□ -2.07
CFT2YLR115W YLR287CQ05881 355 aa2.11□□□□□ -2.07
CFT2YLR115W CEX1Q12453 761 aa2.11□□□□□ -2.07
CFT2YLR115W VMR1P38735 1592 aa2.11□□□□□ -2.07
CFT2YLR115W SEC12P11655 471 aa2.1□□□□□ -2.07
CFT2YLR115W YAP1P19880 650 aaKnown RBP2.1□□□□□ -2.07
CFT2YLR115W CBP3P21560 335 aa2.1□□□□□ -2.07
CFT2YLR115W TRX1P22217 103 aaKnown RBP2.1□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms