RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C ARK1P53974 638 aa5.89□□□□□ -1.47
SSK1YLR006C DPL1Q05567 589 aa5.89□□□□□ -1.47
SSK1YLR006C PML1Q07930 204 aaPredicted RBP5.89□□□□□ -1.47
SSK1YLR006C TOP3P13099 656 aa5.89□□□□□ -1.47
SSK1YLR006C ADE2P21264 571 aaKnown RBP5.89□□□□□ -1.47
SSK1YLR006C FUN30P31380 1131 aa5.89□□□□□ -1.47
SSK1YLR006C MVD1P32377 396 aaKnown RBP5.89□□□□□ -1.47
SSK1YLR006C MSN4P33749 630 aa5.89□□□□□ -1.47
SSK1YLR006C ALG14P38242 237 aa5.89□□□□□ -1.47
SSK1YLR006C SOL3P38858 249 aa5.89□□□□□ -1.47
SSK1YLR006C MNL1P38888 796 aa5.89□□□□□ -1.47
SSK1YLR006C MRPS18P42847 217 aa5.89□□□□□ -1.47
SSK1YLR006C UBP6P43593 499 aaKnown RBP5.89□□□□□ -1.47
SSK1YLR006C HSH155P49955 971 aaKnown RBP5.89□□□□□ -1.47
SSK1YLR006C TEL2P53038 688 aa5.89□□□□□ -1.47
SSK1YLR006C NCS6P53088 359 aa5.89□□□□□ -1.47
SSK1YLR006C RRT6P53117 311 aaPredicted RBP5.89□□□□□ -1.47
SSK1YLR006C SGF73P53165 657 aa5.89□□□□□ -1.47
SSK1YLR006C YGR111WP53265 400 aa5.89□□□□□ -1.47
SSK1YLR006C TBF1Q02457 562 aa5.89□□□□□ -1.47
SSK1YLR006C SHR3Q02774 210 aa5.89□□□□□ -1.47
SSK1YLR006C MTG1Q03151 367 aaPredicted RBP5.89□□□□□ -1.47
SSK1YLR006C RSF1Q05043 376 aa5.89□□□□□ -1.47
SSK1YLR006C GUK1P15454 187 aaKnown RBP5.88□□□□□ -1.47
SSK1YLR006C DBP5P20449 482 aaKnown RBP5.88□□□□□ -1.47
SSK1YLR006C OLE1P21147 510 aaKnown RBP5.88□□□□□ -1.47
SSK1YLR006C SEC14P24280 304 aaKnown RBP5.88□□□□□ -1.47
SSK1YLR006C PRP22P24384 1145 aaKnown RBP5.88□□□□□ -1.47
SSK1YLR006C ABD1P32783 436 aaPredicted RBP5.88□□□□□ -1.47
SSK1YLR006C YBL055CP34220 418 aaPredicted RBP5.88□□□□□ -1.47
SSK1YLR006C YBL086CP38177 466 aa5.88□□□□□ -1.47
SSK1YLR006C FZO1P38297 855 aa5.88□□□□□ -1.47
SSK1YLR006C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
SSK1YLR006C RPM2Q02773 1202 aa5.88□□□□□ -1.47
SSK1YLR006C OAZ1Q02803 292 aa5.88□□□□□ -1.47
SSK1YLR006C VBA4Q04602 768 aaKnown RBP5.88□□□□□ -1.47
SSK1YLR006C YPR084WQ06821 456 aa5.88□□□□□ -1.47
SSK1YLR006C BDS1Q08347 646 aa5.88□□□□□ -1.47
SSK1YLR006C GNT1Q12096 491 aa5.88□□□□□ -1.47
SSK1YLR006C YDL206WQ12424 762 aa5.88□□□□□ -1.47
SSK1YLR006C SRN2Q99176 213 aa5.88□□□□□ -1.47
SSK1YLR006C PHR1P05066 565 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
SSK1YLR006C CMD1P06787 147 aaKnown RBP5.87□□□□□ -1.47
SSK1YLR006C HEM1P09950 548 aaPredicted RBP5.87□□□□□ -1.47
SSK1YLR006C PWP1P21304 576 aaKnown RBP5.87□□□□□ -1.47
SSK1YLR006C DAL2P25335 343 aa5.87□□□□□ -1.47
SSK1YLR006C CAP1P28495 268 aaKnown RBP5.87□□□□□ -1.47
SSK1YLR006C MUD1P32605 298 aaKnown RBP5.87□□□□□ -1.47
SSK1YLR006C YSC83P32792 385 aa5.87□□□□□ -1.47
SSK1YLR006C PEX2P32800 271 aa5.87□□□□□ -1.47
SSK1YLR006C YME2P32843 850 aa5.87□□□□□ -1.47
SSK1YLR006C MCM7P38132 845 aa5.87□□□□□ -1.47
SSK1YLR006C BIT2P38346 545 aa5.87□□□□□ -1.47
SSK1YLR006C MMS21P38632 267 aa5.87□□□□□ -1.47
SSK1YLR006C GDI1P39958 451 aaKnown RBP5.87□□□□□ -1.47
SSK1YLR006C YTA12P40341 825 aa5.87□□□□□ -1.47
SSK1YLR006C EMW1P42842 904 aaKnown RBP5.87□□□□□ -1.47
SSK1YLR006C MIG2P53035 382 aa5.87□□□□□ -1.47
SSK1YLR006C AIM14P53109 570 aa5.87□□□□□ -1.47
SSK1YLR006C YGL039WP53183 348 aaKnown RBP5.87□□□□□ -1.47
SSK1YLR006C TUB4P53378 473 aa5.87□□□□□ -1.47
SSK1YLR006C DCP2P53550 970 aaKnown RBP5.87□□□□□ -1.47
SSK1YLR006C MNT4P53745 580 aa5.87□□□□□ -1.47
SSK1YLR006C REG1Q00816 1014 aa5.87□□□□□ -1.47
SSK1YLR006C ECM38Q05902 660 aaPredicted RBP5.87□□□□□ -1.47
SSK1YLR006C BLS1Q06071 122 aa5.87□□□□□ -1.47
SSK1YLR006C WHI4Q07655 649 aaKnown RBP5.87□□□□□ -1.47
SSK1YLR006C RTT10Q08924 1013 aa5.87□□□□□ -1.47
SSK1YLR006C SPE3Q12074 293 aaKnown RBP5.87□□□□□ -1.47
SSK1YLR006C PGK1P00560 416 aaKnown RBP5.87□□□□□ -1.47
SSK1YLR006C RAD3P06839 778 aa5.87□□□□□ -1.47
SSK1YLR006C CBF1P17106 351 aa5.87□□□□□ -1.47
SSK1YLR006C PHO81P17442 1178 aa5.87□□□□□ -1.47
SSK1YLR006C MRPL32P25348 183 aa5.87□□□□□ -1.47
SSK1YLR006C ADK2P26364 225 aa5.87□□□□□ -1.47
SSK1YLR006C ADH5P38113 351 aaKnown RBP5.87□□□□□ -1.47
SSK1YLR006C MRX3P38172 270 aa5.87□□□□□ -1.47
SSK1YLR006C PHO88P38264 188 aaPredicted RBP5.87□□□□□ -1.47
SSK1YLR006C SMF2P38778 549 aa5.87□□□□□ -1.47
SSK1YLR006C MTG2P38860 518 aa5.87□□□□□ -1.47
SSK1YLR006C YMR134WP40207 237 aa5.87□□□□□ -1.47
SSK1YLR006C GYP8P43570 497 aa5.87□□□□□ -1.47
SSK1YLR006C ROK1P45818 564 aaPredicted RBP5.87□□□□□ -1.47
SSK1YLR006C YJL171CP46992 396 aa5.87□□□□□ -1.47
SSK1YLR006C MTC3P53077 123 aa5.87□□□□□ -1.47
SSK1YLR006C NOG2P53742 486 aaKnown RBP5.87□□□□□ -1.47
SSK1YLR006C SPO19Q03029 223 aa5.87□□□□□ -1.47
SSK1YLR006C YAP6Q03935 383 aa5.87□□□□□ -1.47
SSK1YLR006C DAL4Q04895 635 aa5.87□□□□□ -1.47
SSK1YLR006C CRD1Q07560 283 aa5.87□□□□□ -1.47
SSK1YLR006C OSW1Q08692 278 aa5.87□□□□□ -1.47
SSK1YLR006C TRM8Q12009 286 aa5.87□□□□□ -1.47
SSK1YLR006C CHS5Q12114 671 aaKnown RBP5.87□□□□□ -1.47
SSK1YLR006C NCR1Q12200 1170 aa5.87□□□□□ -1.47
SSK1YLR006C CET1O13297 549 aaPredicted RBP5.86□□□□□ -1.47
SSK1YLR006C RPS9AO13516 197 aaKnown RBP5.86□□□□□ -1.47
SSK1YLR006C RPS9BP05755 195 aaKnown RBP5.86□□□□□ -1.47
SSK1YLR006C ILV2P07342 687 aaKnown RBP5.86□□□□□ -1.47
SSK1YLR006C YMR085WP0CF18 432 aa5.86□□□□□ -1.47
SSK1YLR006C PEP5P12868 1029 aa5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms