RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPE1	YKL184W	NUP120	P35729	1037 aa		2.92	□□□□□ -1.94
SPE1	YKL184W	YAT2	P40017	923 aa		2.92	□□□□□ -1.94
SPE1	YKL184W	SWF1	Q04629	336 aa		2.92	□□□□□ -1.94
SPE1	YKL184W	GRS2	Q06817	618 aa		2.92	□□□□□ -1.94
SPE1	YKL184W	PTP2	P29461	750 aa		2.91	□□□□□ -1.94
SPE1	YKL184W	MRPL36	P36531	177 aa		2.91	□□□□□ -1.94
SPE1	YKL184W	FSH1	P38777	243 aa	Known RBP	2.91	□□□□□ -1.94
SPE1	YKL184W	UBP7	P40453	1071 aa		2.91	□□□□□ -1.94
SPE1	YKL184W	QRI7	P43122	407 aa		2.91	□□□□□ -1.94
SPE1	YKL184W	SAD1	P43589	448 aa		2.91	□□□□□ -1.94
SPE1	YKL184W	ZAP1	P47043	880 aa		2.91	□□□□□ -1.94
SPE1	YKL184W	DCP2	P53550	970 aa	Known RBP	2.91	□□□□□ -1.94
SPE1	YKL184W	MET14	Q02196	202 aa		2.91	□□□□□ -1.94
SPE1	YKL184W	YOL057W	Q08225	711 aa		2.91	□□□□□ -1.94
SPE1	YKL184W	NYV1	Q12255	253 aa		2.91	□□□□□ -1.94
SPE1	YKL184W	SUL2	Q12325	893 aa		2.91	□□□□□ -1.94
SPE1	YKL184W	GAL1	P04385	528 aa		2.9	□□□□□ -1.95
SPE1	YKL184W	ARP2	P32381	391 aa	Known RBP	2.9	□□□□□ -1.95
SPE1	YKL184W	YIL169C	P40442	995 aa		2.9	□□□□□ -1.95
SPE1	YKL184W	MSY1	P48527	492 aa		2.9	□□□□□ -1.95
SPE1	YKL184W	IMA1	P53051	589 aa		2.9	□□□□□ -1.95
SPE1	YKL184W	CPR6	P53691	371 aa	Known RBP	2.9	□□□□□ -1.95
SPE1	YKL184W	EIS1	Q05050	843 aa	Known RBP	2.9	□□□□□ -1.95
SPE1	YKL184W	YLR281C	Q05863	155 aa		2.9	□□□□□ -1.95
SPE1	YKL184W	PIG1	Q06216	648 aa		2.9	□□□□□ -1.95
SPE1	YKL184W	POS5	Q06892	414 aa		2.9	□□□□□ -1.95
SPE1	YKL184W	MLH2	Q07980	695 aa		2.9	□□□□□ -1.95
SPE1	YKL184W	BIK1	P11709	440 aa		2.89	□□□□□ -1.95
SPE1	YKL184W	SWI4	P25302	1093 aa	Known RBP	2.89	□□□□□ -1.95
SPE1	YKL184W	RFA2	P26754	273 aa	Known RBP	2.89	□□□□□ -1.95
SPE1	YKL184W	RKM3	P38222	552 aa		2.89	□□□□□ -1.95
SPE1	YKL184W	ARC40	P38328	384 aa	Known RBP	2.89	□□□□□ -1.95
SPE1	YKL184W	MET30	P39014	640 aa		2.89	□□□□□ -1.95
SPE1	YKL184W	PHM8	P40025	321 aa		2.89	□□□□□ -1.95
SPE1	YKL184W	YIL161W	P40449	235 aa	Known RBP	2.89	□□□□□ -1.95
SPE1	YKL184W	CDC1	P40986	491 aa		2.89	□□□□□ -1.95
SPE1	YKL184W	RTS3	P53289	263 aa		2.89	□□□□□ -1.95
SPE1	YKL184W	PAP2	P53632	584 aa	Known RBP	2.89	□□□□□ -1.95
SPE1	YKL184W	YMR034C	Q05131	434 aa	Predicted RBP	2.89	□□□□□ -1.95
SPE1	YKL184W	SWT1	Q12104	458 aa		2.89	□□□□□ -1.95
SPE1	YKL184W	YPT1	P01123	206 aa	Known RBP	2.88	□□□□□ -1.95
SPE1	YKL184W	ATP4	P05626	244 aa		2.88	□□□□□ -1.95
SPE1	YKL184W	SPO16	P17122	198 aa		2.88	□□□□□ -1.95
SPE1	YKL184W	PHO81	P17442	1178 aa		2.88	□□□□□ -1.95
SPE1	YKL184W	CLB4	P24871	460 aa		2.88	□□□□□ -1.95
SPE1	YKL184W	YCR043C	P25361	127 aa		2.88	□□□□□ -1.95
SPE1	YKL184W	LRE1	P25579	583 aa	Known RBP	2.88	□□□□□ -1.95
SPE1	YKL184W	VRG4	P40107	337 aa		2.88	□□□□□ -1.95
SPE1	YKL184W	YIL152W	P40455	235 aa		2.88	□□□□□ -1.95
SPE1	YKL184W	TES1	P41903	349 aa	Known RBP	2.88	□□□□□ -1.95
SPE1	YKL184W	YGL036W	P53185	909 aa	Predicted RBP	2.88	□□□□□ -1.95
SPE1	YKL184W	ADE16	P54113	591 aa	Known RBP	2.88	□□□□□ -1.95
SPE1	YKL184W	MOT3	P54785	490 aa	Known RBP	2.88	□□□□□ -1.95
SPE1	YKL184W	ECI1	Q05871	280 aa		2.88	□□□□□ -1.95
SPE1	YKL184W	BRE1	Q07457	700 aa	Known RBP	2.88	□□□□□ -1.95
SPE1	YKL184W	YOR111W	Q99210	232 aa		2.88	□□□□□ -1.95
SPE1	YKL184W	YEF3	P16521	1044 aa	Known RBP	2.87	□□□□□ -1.95
SPE1	YKL184W	LHS1	P36016	881 aa		2.87	□□□□□ -1.95
SPE1	YKL184W	RTT107	P38850	1070 aa		2.87	□□□□□ -1.95
SPE1	YKL184W	VPS41	P38959	992 aa		2.87	□□□□□ -1.95
SPE1	YKL184W	BUD16	P39988	312 aa		2.87	□□□□□ -1.95
SPE1	YKL184W	PCL6	P40038	420 aa		2.87	□□□□□ -1.95
SPE1	YKL184W	MRX1	P40050	688 aa		2.87	□□□□□ -1.95
SPE1	YKL184W	TAM41	P53230	385 aa		2.87	□□□□□ -1.95
SPE1	YKL184W	TRS130	Q03660	1102 aa		2.87	□□□□□ -1.95
SPE1	YKL184W	SWA2	Q06677	668 aa		2.87	□□□□□ -1.95
SPE1	YKL184W	GPN2	Q08726	347 aa	Predicted RBP	2.87	□□□□□ -1.95
SPE1	YKL184W	FRE3	Q08905	711 aa		2.87	□□□□□ -1.95
SPE1	YKL184W	YLR112W	Q12130	139 aa		2.87	□□□□□ -1.95
SPE1	YKL184W	RRP6	Q12149	733 aa	Known RBP	2.87	□□□□□ -1.95
SPE1	YKL184W	MSS18	P08593	268 aa		2.86	□□□□□ -1.95
SPE1	YKL184W	RPL42A	P0CX27	106 aa	Known RBP	2.86	□□□□□ -1.95
SPE1	YKL184W	RPL42B	P0CX28	106 aa	Known RBP	2.86	□□□□□ -1.95
SPE1	YKL184W	RGT1	P32862	1170 aa		2.86	□□□□□ -1.95
SPE1	YKL184W	CCT4	P39078	528 aa	Known RBP	2.86	□□□□□ -1.95
SPE1	YKL184W	YNL234W	P53857	426 aa		2.86	□□□□□ -1.95
SPE1	YKL184W	IZH1	Q03419	316 aa		2.86	□□□□□ -1.95
SPE1	YKL184W	YLR455W	Q06188	304 aa		2.86	□□□□□ -1.95
SPE1	YKL184W	ATP2	P00830	511 aa	Known RBP	2.85	□□□□□ -1.95
SPE1	YKL184W	NPR3	P38742	1146 aa		2.85	□□□□□ -1.95
SPE1	YKL184W	SPC72	P39723	622 aa		2.85	□□□□□ -1.95
SPE1	YKL184W	PUG1	P40100	303 aa		2.85	□□□□□ -1.95
SPE1	YKL184W	EAF7	P53911	425 aa	Known RBP	2.85	□□□□□ -1.95
SPE1	YKL184W	BET4	Q00618	327 aa		2.85	□□□□□ -1.95
SPE1	YKL184W	CAC2	Q04199	468 aa		2.85	□□□□□ -1.95
SPE1	YKL184W	NRT1	Q08485	598 aa		2.85	□□□□□ -1.95
SPE1	YKL184W	CBP1	P07252	654 aa		2.85	□□□□□ -1.95
SPE1	YKL184W	GPA1	P08539	472 aa		2.85	□□□□□ -1.95
SPE1	YKL184W	YML003W	P0CF16	290 aa		2.85	□□□□□ -1.95
SPE1	YKL184W	GUK1	P15454	187 aa	Known RBP	2.85	□□□□□ -1.95
SPE1	YKL184W	SOF1	P33750	489 aa	Known RBP	2.85	□□□□□ -1.95
SPE1	YKL184W	ADE17	P38009	592 aa	Known RBP	2.85	□□□□□ -1.95
SPE1	YKL184W	MNN2	P38069	597 aa		2.85	□□□□□ -1.95
SPE1	YKL184W	YHL041W	P38730	149 aa		2.85	□□□□□ -1.95
SPE1	YKL184W	PSF2	P40359	213 aa		2.85	□□□□□ -1.95
SPE1	YKL184W	MAF1	P41910	395 aa		2.85	□□□□□ -1.95
SPE1	YKL184W	PSP1	P50896	841 aa	Known RBP	2.85	□□□□□ -1.95
SPE1	YKL184W	YGL260W	P53056	76 aa		2.85	□□□□□ -1.95
SPE1	YKL184W	DIG1	Q03063	452 aa	Known RBP	2.85	□□□□□ -1.95
SPE1	YKL184W	PFA5	Q03289	374 aa		2.85	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms