RNA–Protein interactions for RNA: YKL138C-A

HSK3, Transcript of Essential subunit of the Dam1 complex (aka DASH complex), yeastyeast

Gene HSK3, Length 210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSK3YKL138C-A ATX2Q12067 313 aa2.3□□□□□ -2.04
HSK3YKL138C-A SSM4P40318 1319 aa2.3□□□□□ -2.04
HSK3YKL138C-A ILV2P07342 687 aaKnown RBP2.29□□□□□ -2.04
HSK3YKL138C-A YFL068WP0CX99 160 aa2.29□□□□□ -2.04
HSK3YKL138C-A YLL066W-AP0CY00 160 aa2.29□□□□□ -2.04
HSK3YKL138C-A YLL067W-AP0CY01 160 aa2.29□□□□□ -2.04
HSK3YKL138C-A SIR1P21691 654 aa2.29□□□□□ -2.04
HSK3YKL138C-A MCM3P24279 971 aaKnown RBP2.29□□□□□ -2.04
HSK3YKL138C-A SWC3P31376 625 aa2.29□□□□□ -2.04
HSK3YKL138C-A GCS1P35197 352 aa2.29□□□□□ -2.04
HSK3YKL138C-A RPF2P36160 344 aaKnown RBP2.29□□□□□ -2.04
HSK3YKL138C-A YPT11P48559 417 aa2.29□□□□□ -2.04
HSK3YKL138C-A ORC5P50874 479 aa2.29□□□□□ -2.04
HSK3YKL138C-A EAF7P53911 425 aaKnown RBP2.29□□□□□ -2.04
HSK3YKL138C-A AAT1Q01802 451 aa2.29□□□□□ -2.04
HSK3YKL138C-A NUP53Q03790 475 aa2.29□□□□□ -2.04
HSK3YKL138C-A TMA64Q04600 565 aaKnown RBP2.29□□□□□ -2.04
HSK3YKL138C-A EIS1Q05050 843 aaKnown RBP2.29□□□□□ -2.04
HSK3YKL138C-A HIM1Q06674 414 aa2.29□□□□□ -2.04
HSK3YKL138C-A THI3Q07471 609 aa2.29□□□□□ -2.04
HSK3YKL138C-A IWR1Q07532 353 aaPredicted RBP2.29□□□□□ -2.04
HSK3YKL138C-A YDL121CQ07541 149 aa2.29□□□□□ -2.04
HSK3YKL138C-A MLH2Q07980 695 aa2.29□□□□□ -2.04
HSK3YKL138C-A BUD21Q08492 214 aaPredicted RBP2.29□□□□□ -2.04
HSK3YKL138C-A BUD7Q08754 746 aa2.29□□□□□ -2.04
HSK3YKL138C-A NDD1Q08887 554 aa2.29□□□□□ -2.04
HSK3YKL138C-A LEA1Q08963 238 aaPredicted RBP2.29□□□□□ -2.04
HSK3YKL138C-A YER145C-AA0A023PYF4 145 aa2.28□□□□□ -2.04
HSK3YKL138C-A ADE3P07245 946 aaKnown RBP2.28□□□□□ -2.04
HSK3YKL138C-A RER1P25560 188 aa2.28□□□□□ -2.04
HSK3YKL138C-A URK1P27515 501 aa2.28□□□□□ -2.04
HSK3YKL138C-A LAC1P28496 418 aa2.28□□□□□ -2.04
HSK3YKL138C-A SIP1P32578 815 aa2.28□□□□□ -2.04
HSK3YKL138C-A PSY4P38193 441 aa2.28□□□□□ -2.04
HSK3YKL138C-A ARC40P38328 384 aaKnown RBP2.28□□□□□ -2.04
HSK3YKL138C-A ARN1P38731 627 aa2.28□□□□□ -2.04
HSK3YKL138C-A TOM71P38825 639 aaKnown RBP2.28□□□□□ -2.04
HSK3YKL138C-A KAP123P40069 1113 aaKnown RBP2.28□□□□□ -2.04
HSK3YKL138C-A TES1P41903 349 aaKnown RBP2.28□□□□□ -2.04
HSK3YKL138C-A YGL036WP53185 909 aaPredicted RBP2.28□□□□□ -2.04
HSK3YKL138C-A CPR6P53691 371 aaKnown RBP2.28□□□□□ -2.04
HSK3YKL138C-A MRPL13Q02204 264 aa2.28□□□□□ -2.04
HSK3YKL138C-A ATG21Q02887 496 aa2.28□□□□□ -2.04
HSK3YKL138C-A STP3Q05937 343 aa2.28□□□□□ -2.04
HSK3YKL138C-A SUL2Q12325 893 aa2.28□□□□□ -2.04
HSK3YKL138C-A YBR255C-AQ3E776 120 aa2.28□□□□□ -2.04
HSK3YKL138C-A NUC1P08466 329 aa2.27□□□□□ -2.05
HSK3YKL138C-A MTF2P10849 440 aa2.27□□□□□ -2.05
HSK3YKL138C-A BIK1P11709 440 aa2.27□□□□□ -2.05
HSK3YKL138C-A PCT1P13259 424 aa2.27□□□□□ -2.05
HSK3YKL138C-A POL3P15436 1097 aa2.27□□□□□ -2.05
HSK3YKL138C-A PDE1P22434 369 aa2.27□□□□□ -2.05
HSK3YKL138C-A RIT1P23796 513 aa2.27□□□□□ -2.05
HSK3YKL138C-A YCL049CP25577 312 aa2.27□□□□□ -2.05
HSK3YKL138C-A HES1P35843 434 aa2.27□□□□□ -2.05
HSK3YKL138C-A SCO2P38072 301 aa2.27□□□□□ -2.05
HSK3YKL138C-A FSH1P38777 243 aaKnown RBP2.27□□□□□ -2.05
HSK3YKL138C-A BUD16P39988 312 aa2.27□□□□□ -2.05
HSK3YKL138C-A RPT2P40327 437 aaKnown RBP2.27□□□□□ -2.05
HSK3YKL138C-A CAB2P40506 365 aa2.27□□□□□ -2.05
HSK3YKL138C-A SMK1P41808 388 aa2.27□□□□□ -2.05
HSK3YKL138C-A IMA1P53051 589 aa2.27□□□□□ -2.05
HSK3YKL138C-A YNL058CP53947 316 aa2.27□□□□□ -2.05
HSK3YKL138C-A VTC3Q02725 835 aa2.27□□□□□ -2.05
HSK3YKL138C-A DIG1Q03063 452 aaKnown RBP2.27□□□□□ -2.05
HSK3YKL138C-A YML131WQ03102 365 aa2.27□□□□□ -2.05
HSK3YKL138C-A YMR018WQ04364 514 aa2.27□□□□□ -2.05
HSK3YKL138C-A PDR8Q06149 701 aa2.27□□□□□ -2.05
HSK3YKL138C-A DSE3Q08729 430 aa2.27□□□□□ -2.05
HSK3YKL138C-A FRE3Q08905 711 aa2.27□□□□□ -2.05
HSK3YKL138C-A YLR112WQ12130 139 aa2.27□□□□□ -2.05
HSK3YKL138C-A UBX3Q12229 455 aa2.27□□□□□ -2.05
HSK3YKL138C-A GPA1P08539 472 aa2.26□□□□□ -2.05
HSK3YKL138C-A APA1P16550 321 aaKnown RBP2.26□□□□□ -2.05
HSK3YKL138C-A PFK2P16862 959 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
HSK3YKL138C-A UBC1P21734 215 aaKnown RBP2.26□□□□□ -2.05
HSK3YKL138C-A CLB4P24871 460 aa2.26□□□□□ -2.05
HSK3YKL138C-A YSP3P25036 478 aa2.26□□□□□ -2.05
HSK3YKL138C-A RAD16P31244 790 aa2.26□□□□□ -2.05
HSK3YKL138C-A OCT1P35999 772 aa2.26□□□□□ -2.05
HSK3YKL138C-A RRN3P36070 627 aa2.26□□□□□ -2.05
HSK3YKL138C-A EXO84P38261 753 aa2.26□□□□□ -2.05
HSK3YKL138C-A YBR138CP38277 524 aa2.26□□□□□ -2.05
HSK3YKL138C-A UME6P39001 836 aa2.26□□□□□ -2.05
HSK3YKL138C-A SPC72P39723 622 aa2.26□□□□□ -2.05
HSK3YKL138C-A PUG1P40100 303 aa2.26□□□□□ -2.05
HSK3YKL138C-A PSF2P40359 213 aa2.26□□□□□ -2.05
HSK3YKL138C-A YNL144CP53907 740 aa2.26□□□□□ -2.05
HSK3YKL138C-A BOP3P53958 396 aa2.26□□□□□ -2.05
HSK3YKL138C-A YPL108WQ02872 168 aaPredicted RBP2.26□□□□□ -2.05
HSK3YKL138C-A TRS130Q03660 1102 aa2.26□□□□□ -2.05
HSK3YKL138C-A CIA1Q05583 330 aa2.26□□□□□ -2.05
HSK3YKL138C-A PIG1Q06216 648 aa2.26□□□□□ -2.05
HSK3YKL138C-A GSH2Q08220 491 aa2.26□□□□□ -2.05
HSK3YKL138C-A NEW1Q08972 1196 aaKnown RBP2.26□□□□□ -2.05
HSK3YKL138C-A GFD2P25370 566 aaKnown RBP2.25□□□□□ -2.05
HSK3YKL138C-A RFA2P26754 273 aaKnown RBP2.25□□□□□ -2.05
HSK3YKL138C-A ARP2P32381 391 aaKnown RBP2.25□□□□□ -2.05
HSK3YKL138C-A GCD7P32502 381 aaPredicted RBP2.25□□□□□ -2.05
HSK3YKL138C-A SLC1P33333 303 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms