RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT23	YKL020C	ERP5	P38819	212 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	MTG2	P38860	518 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	SSO2	P39926	295 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	CIT3	P43635	486 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	YNR021W	P53723	404 aa	Known RBP	3.98	□□□□□ -1.77
SPT23	YKL020C	APP1	P53933	587 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	DAK1	P54838	584 aa	Known RBP	3.98	□□□□□ -1.77
SPT23	YKL020C	YMR010W	Q03687	405 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	SOV1	Q04748	898 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	YPR084W	Q06821	456 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	BAG7	Q12128	409 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	HOS1	Q12214	470 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	MED1	Q12321	566 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	TDH1	P00360	332 aa	Known RBP	3.97	□□□□□ -1.77
SPT23	YKL020C	GLN4	P13188	809 aa	Known RBP	3.97	□□□□□ -1.77
SPT23	YKL020C	DBF20	P32328	564 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	DAL1	P32375	460 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	MRS6	P32864	603 aa	Known RBP	3.97	□□□□□ -1.77
SPT23	YKL020C	PPS1	P38148	807 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
SPT23	YKL020C	YBR032W	P38223	100 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	MSS4	P38994	779 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	PAC11	P40960	533 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	LSM1	P47017	172 aa	Known RBP	3.97	□□□□□ -1.77
SPT23	YKL020C	BIR1	P47134	954 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	YKE2	P52553	114 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	CNM67	P53865	581 aa	Known RBP	3.97	□□□□□ -1.77
SPT23	YKL020C	EAR1	Q03212	550 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	YDR239C	Q03780	787 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	SMP3	Q04174	516 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	THI3	Q07471	609 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	CUE5	Q08412	411 aa	Known RBP	3.97	□□□□□ -1.77
SPT23	YKL020C	ATP6	P00854	259 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	HMG2	P12684	1045 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	SPO16	P17122	198 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	PRP9	P19736	530 aa	Known RBP	3.97	□□□□□ -1.77
SPT23	YKL020C	PRR1	P28708	518 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	CHS3	P29465	1165 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	GLG1	P36143	616 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	OSH7	P38755	437 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	VFA1	P40080	203 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	PIG2	P40187	538 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	VAC7	P53950	1165 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	MUK1	Q02866	612 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	IRC4	Q03036	179 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	BUD22	Q04347	519 aa	Known RBP	3.97	□□□□□ -1.77
SPT23	YKL020C	UTP14	Q04500	899 aa	Known RBP	3.97	□□□□□ -1.77
SPT23	YKL020C	ECM38	Q05902	660 aa	Predicted RBP	3.97	□□□□□ -1.77
SPT23	YKL020C	PGA3	Q12746	312 aa	Known RBP	3.97	□□□□□ -1.77
SPT23	YKL020C	RAD61	Q99359	647 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	CBP6	P07253	162 aa	Predicted RBP	3.97	□□□□□ -1.77
SPT23	YKL020C	DBP5	P20449	482 aa	Known RBP	3.97	□□□□□ -1.77
SPT23	YKL020C	RPT5	P33297	434 aa	Known RBP	3.97	□□□□□ -1.77
SPT23	YKL020C	HES1	P35843	434 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	SRP72	P38688	640 aa	Known RBP	3.97	□□□□□ -1.77
SPT23	YKL020C	MIP6	P38760	659 aa	Known RBP	3.97	□□□□□ -1.77
SPT23	YKL020C	FLC2	P39719	783 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	BOL3	P39724	118 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	YIL161W	P40449	235 aa	Known RBP	3.97	□□□□□ -1.77
SPT23	YKL020C	UFE1	P41834	346 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	LSM8	P47093	109 aa	Known RBP	3.97	□□□□□ -1.77
SPT23	YKL020C	LIA1	P47120	325 aa	Known RBP	3.97	□□□□□ -1.77
SPT23	YKL020C	YDL183C	P48569	320 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	ZRG17	P53735	605 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	CAF120	P53836	1060 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	MPS1	P54199	764 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	MET14	Q02196	202 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	SPP1	Q03012	353 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	TOS4	Q06266	489 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	FRA1	Q07825	749 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	TMA46	Q12000	345 aa	Known RBP	3.97	□□□□□ -1.77
SPT23	YKL020C	RCN2	Q12044	265 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	MED2	Q12124	431 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	TY3A-G	Q12173	290 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	TY3A-I	Q99219	290 aa		3.97	□□□□□ -1.77
SPT23	YKL020C	ADR1	P07248	1323 aa		3.96	□□□□□ -1.77
SPT23	YKL020C	RPL25	P04456	142 aa	Known RBP	3.96	□□□□□ -1.78
SPT23	YKL020C	ARG3	P05150	338 aa		3.96	□□□□□ -1.78
SPT23	YKL020C	PPR1	P07272	904 aa	Predicted RBP	3.96	□□□□□ -1.78
SPT23	YKL020C	PRB1	P09232	635 aa		3.96	□□□□□ -1.78
SPT23	YKL020C	YGL041W-A	P0C5N3	154 aa		3.96	□□□□□ -1.78
SPT23	YKL020C	WHI2	P12611	486 aa		3.96	□□□□□ -1.78
SPT23	YKL020C	CLN3	P13365	580 aa		3.96	□□□□□ -1.78
SPT23	YKL020C	UTR1	P21373	530 aa		3.96	□□□□□ -1.78
SPT23	YKL020C	YBR238C	P38330	731 aa	Known RBP	3.96	□□□□□ -1.78
SPT23	YKL020C	IMD2	P38697	523 aa	Known RBP	3.96	□□□□□ -1.78
SPT23	YKL020C	MNL1	P38888	796 aa		3.96	□□□□□ -1.78
SPT23	YKL020C	UPF3	P48412	387 aa	Known RBP	3.96	□□□□□ -1.78
SPT23	YKL020C	MSE1	P48525	536 aa		3.96	□□□□□ -1.78
SPT23	YKL020C	CUE3	P53137	624 aa	Known RBP	3.96	□□□□□ -1.78
SPT23	YKL020C	YGR111W	P53265	400 aa		3.96	□□□□□ -1.78
SPT23	YKL020C	PRO2	P54885	456 aa	Known RBP	3.96	□□□□□ -1.78
SPT23	YKL020C	PET117	Q02771	107 aa		3.96	□□□□□ -1.78
SPT23	YKL020C	RLI1	Q03195	608 aa	Known RBP	3.96	□□□□□ -1.78
SPT23	YKL020C	PKH3	Q03306	898 aa	Predicted RBP	3.96	□□□□□ -1.78
SPT23	YKL020C	RAD30	Q04049	632 aa		3.96	□□□□□ -1.78
SPT23	YKL020C	ECI1	Q05871	280 aa		3.96	□□□□□ -1.78
SPT23	YKL020C	SPO77	Q06134	477 aa		3.96	□□□□□ -1.78
SPT23	YKL020C	MHR1	Q06630	226 aa		3.96	□□□□□ -1.78
SPT23	YKL020C	MRL1	Q06815	381 aa		3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms