RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C SAP1P39955 897 aaKnown RBP2.19□□□□□ -2.06
UFD4YKL010C YIL054WP40524 105 aa2.19□□□□□ -2.06
UFD4YKL010C BUD13P46947 266 aaPredicted RBP2.19□□□□□ -2.06
UFD4YKL010C ALY2P47029 1046 aa2.19□□□□□ -2.06
UFD4YKL010C MAD3P47074 515 aa2.19□□□□□ -2.06
UFD4YKL010C SLD5Q03406 294 aa2.19□□□□□ -2.06
UFD4YKL010C RAD30Q04049 632 aa2.19□□□□□ -2.06
UFD4YKL010C RSA3Q05942 220 aaKnown RBP2.19□□□□□ -2.06
UFD4YKL010C NUT2Q06213 157 aa2.19□□□□□ -2.06
UFD4YKL010C YLR053CQ12026 108 aa2.19□□□□□ -2.06
UFD4YKL010C PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
UFD4YKL010C NSI1Q12457 570 aa2.19□□□□□ -2.06
UFD4YKL010C YPL119C-AQ3E751 87 aa2.19□□□□□ -2.06
UFD4YKL010C NHA1Q99271 985 aa2.19□□□□□ -2.06
UFD4YKL010C RPS4AP0CX35 261 aaKnown RBP2.19□□□□□ -2.06
UFD4YKL010C RPS4BP0CX36 261 aaKnown RBP2.19□□□□□ -2.06
UFD4YKL010C MEI4P29467 408 aa2.19□□□□□ -2.06
UFD4YKL010C MRE11P32829 692 aa2.19□□□□□ -2.06
UFD4YKL010C FRT2P39734 528 aa2.19□□□□□ -2.06
UFD4YKL010C KHA1P40309 873 aa2.19□□□□□ -2.06
UFD4YKL010C MAM33P40513 266 aa2.19□□□□□ -2.06
UFD4YKL010C ALT1P52893 592 aa2.19□□□□□ -2.06
UFD4YKL010C PEX8P53248 589 aa2.19□□□□□ -2.06
UFD4YKL010C BET4Q00618 327 aa2.19□□□□□ -2.06
UFD4YKL010C RPM2Q02773 1202 aa2.19□□□□□ -2.06
UFD4YKL010C SPO19Q03029 223 aa2.19□□□□□ -2.06
UFD4YKL010C CWC15Q03772 175 aaKnown RBP2.19□□□□□ -2.06
UFD4YKL010C ESA1Q08649 445 aa2.19□□□□□ -2.06
UFD4YKL010C HSH49Q99181 213 aaPredicted RBP2.19□□□□□ -2.06
UFD4YKL010C RGS2Q99188 309 aa2.19□□□□□ -2.06
UFD4YKL010C RHO2P06781 192 aa2.18□□□□□ -2.06
UFD4YKL010C SPT3P06844 337 aa2.18□□□□□ -2.06
UFD4YKL010C SWI5P08153 709 aa2.18□□□□□ -2.06
UFD4YKL010C MRP13P12686 339 aa2.18□□□□□ -2.06
UFD4YKL010C HRR25P29295 494 aaKnown RBP2.18□□□□□ -2.06
UFD4YKL010C GPI10P30777 616 aa2.18□□□□□ -2.06
UFD4YKL010C YKR015CP36111 568 aa2.18□□□□□ -2.06
UFD4YKL010C ECM13P38195 257 aa2.18□□□□□ -2.06
UFD4YKL010C PCF11P39081 626 aaPredicted RBP2.18□□□□□ -2.06
UFD4YKL010C PRM9P39551 298 aa2.18□□□□□ -2.06
UFD4YKL010C PEP8P40335 379 aa2.18□□□□□ -2.06
UFD4YKL010C COA1P40452 197 aa2.18□□□□□ -2.06
UFD4YKL010C SPR3P41901 512 aa2.18□□□□□ -2.06
UFD4YKL010C GCN20P43535 752 aaKnown RBP2.18□□□□□ -2.06
UFD4YKL010C ASG7P46993 209 aa2.18□□□□□ -2.06
UFD4YKL010C TEL2P53038 688 aa2.18□□□□□ -2.06
UFD4YKL010C YGL108CP53139 140 aa2.18□□□□□ -2.06
UFD4YKL010C ASI1P54074 624 aa2.18□□□□□ -2.06
UFD4YKL010C ECM9Q02202 377 aa2.18□□□□□ -2.06
UFD4YKL010C SNU56Q03782 492 aaKnown RBP2.18□□□□□ -2.06
UFD4YKL010C TDA6Q06466 467 aa2.18□□□□□ -2.06
UFD4YKL010C TPO1Q07824 586 aa2.18□□□□□ -2.06
UFD4YKL010C NOC3Q07896 663 aaPredicted RBP2.18□□□□□ -2.06
UFD4YKL010C MDM38Q08179 573 aa2.18□□□□□ -2.06
UFD4YKL010C ATG11Q12527 1178 aa2.18□□□□□ -2.06
UFD4YKL010C PHO81P17442 1178 aa2.18□□□□□ -2.06
UFD4YKL010C CLB4P24871 460 aa2.18□□□□□ -2.06
UFD4YKL010C SLM5P25345 492 aaKnown RBP2.18□□□□□ -2.06
UFD4YKL010C URA10P30402 227 aa2.18□□□□□ -2.06
UFD4YKL010C SLD2P34252 453 aa2.18□□□□□ -2.06
UFD4YKL010C NUP120P35729 1037 aa2.18□□□□□ -2.06
UFD4YKL010C RIB1P38066 345 aa2.18□□□□□ -2.06
UFD4YKL010C GIP1P38229 639 aa2.18□□□□□ -2.06
UFD4YKL010C MUP3P38734 546 aa2.18□□□□□ -2.06
UFD4YKL010C FSH1P38777 243 aaKnown RBP2.18□□□□□ -2.06
UFD4YKL010C ERP5P38819 212 aa2.18□□□□□ -2.06
UFD4YKL010C AXL2P38928 823 aa2.18□□□□□ -2.06
UFD4YKL010C SCS2P40075 244 aaKnown RBP2.18□□□□□ -2.06
UFD4YKL010C COS6P53344 381 aa2.18□□□□□ -2.06
UFD4YKL010C RNY1Q02933 434 aaKnown RBP2.18□□□□□ -2.06
UFD4YKL010C YDR131CQ03899 556 aa2.18□□□□□ -2.06
UFD4YKL010C RRP17Q04031 235 aaPredicted RBP2.18□□□□□ -2.06
UFD4YKL010C ARP9Q05123 467 aa2.18□□□□□ -2.06
UFD4YKL010C VHS3Q08438 674 aa2.18□□□□□ -2.06
UFD4YKL010C GPM2Q12008 311 aa2.18□□□□□ -2.06
UFD4YKL010C YMR030W-AQ3E760 96 aa2.18□□□□□ -2.06
UFD4YKL010C TY4A-HQ6Q5P6 413 aa2.18□□□□□ -2.06
UFD4YKL010C ERG6P25087 383 aaKnown RBP2.18□□□□□ -2.06
UFD4YKL010C GFD2P25370 566 aaKnown RBP2.18□□□□□ -2.06
UFD4YKL010C PHA2P32452 334 aa2.18□□□□□ -2.06
UFD4YKL010C EFB1P32471 206 aaKnown RBP2.18□□□□□ -2.06
UFD4YKL010C PEP12P32854 288 aa2.18□□□□□ -2.06
UFD4YKL010C HSP78P33416 811 aa2.18□□□□□ -2.06
UFD4YKL010C YKL100CP34248 587 aa2.18□□□□□ -2.06
UFD4YKL010C FLR1P38124 548 aa2.18□□□□□ -2.06
UFD4YKL010C VID24P38263 362 aa2.18□□□□□ -2.06
UFD4YKL010C YBR285WP38354 144 aa2.18□□□□□ -2.06
UFD4YKL010C SFB3P38810 929 aa2.18□□□□□ -2.06
UFD4YKL010C LAM1P38851 1228 aa2.18□□□□□ -2.06
UFD4YKL010C RGD2P43556 714 aa2.18□□□□□ -2.06
UFD4YKL010C YGR283CP53336 341 aaPredicted RBP2.18□□□□□ -2.06
UFD4YKL010C BIO4P53630 237 aa2.18□□□□□ -2.06
UFD4YKL010C IST1P53843 298 aaPredicted RBP2.18□□□□□ -2.06
UFD4YKL010C TEP1P53916 434 aa2.18□□□□□ -2.06
UFD4YKL010C GPD1Q00055 391 aaKnown RBP2.18□□□□□ -2.06
UFD4YKL010C PRP3Q03338 469 aaPredicted RBP2.18□□□□□ -2.06
UFD4YKL010C TY1A-DR2Q03964 440 aaKnown RBP2.18□□□□□ -2.06
UFD4YKL010C YKU80Q04437 629 aa2.18□□□□□ -2.06
UFD4YKL010C GAL83Q04739 417 aa2.18□□□□□ -2.06
UFD4YKL010C ECM30Q06673 1274 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms