RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT1	YJR001W	MRX6	P48564	524 aa		4.54	□□□□□ -1.68
AVT1	YJR001W	GCV2	P49095	1034 aa		4.54	□□□□□ -1.68
AVT1	YJR001W	MLC1	P53141	149 aa		4.54	□□□□□ -1.68
AVT1	YJR001W	CGR1	P53188	120 aa		4.54	□□□□□ -1.68
AVT1	YJR001W	SFB2	P53953	876 aa		4.54	□□□□□ -1.68
AVT1	YJR001W	DAK1	P54838	584 aa	Known RBP	4.54	□□□□□ -1.68
AVT1	YJR001W	MAK10	Q02197	733 aa		4.54	□□□□□ -1.68
AVT1	YJR001W	SRC1	Q03707	834 aa		4.54	□□□□□ -1.68
AVT1	YJR001W	YDR514C	Q04408	483 aa		4.54	□□□□□ -1.68
AVT1	YJR001W	RTN1	Q04947	295 aa	Known RBP	4.54	□□□□□ -1.68
AVT1	YJR001W	SPH1	Q06160	661 aa		4.54	□□□□□ -1.68
AVT1	YJR001W	VAM6	Q07468	1049 aa		4.54	□□□□□ -1.68
AVT1	YJR001W	YOR289W	Q12012	251 aa	Predicted RBP	4.54	□□□□□ -1.68
AVT1	YJR001W	CHS5	Q12114	671 aa	Known RBP	4.54	□□□□□ -1.68
AVT1	YJR001W	ZRT2	Q12436	422 aa		4.54	□□□□□ -1.68
AVT1	YJR001W	YOR019W	Q99248	730 aa		4.54	□□□□□ -1.68
AVT1	YJR001W	PHO5	P00635	467 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	SUI3	P09064	285 aa	Known RBP	4.53	□□□□□ -1.68
AVT1	YJR001W	BET2	P20133	325 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	DBP2	P24783	546 aa	Known RBP	4.53	□□□□□ -1.68
AVT1	YJR001W	GRR1	P24814	1151 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	CWH43	P25618	953 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	MEI5	P32489	222 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	MGM101	P32787	269 aa	Known RBP	4.53	□□□□□ -1.68
AVT1	YJR001W	AFG2	P32794	780 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	MDL2	P33311	773 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	YUH1	P35127	236 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	KEL1	P38853	1164 aa	Known RBP	4.53	□□□□□ -1.68
AVT1	YJR001W	RPN10	P38886	268 aa	Known RBP	4.53	□□□□□ -1.68
AVT1	YJR001W	TEL2	P53038	688 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	FYV6	P53913	173 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	GCR2	Q01722	534 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	KAP95	Q06142	861 aa	Known RBP	4.53	□□□□□ -1.68
AVT1	YJR001W	CDC19	P00549	500 aa	Known RBP	4.53	□□□□□ -1.68
AVT1	YJR001W	RPP2B	P02400	110 aa	Known RBP	4.53	□□□□□ -1.68
AVT1	YJR001W	HIS3	P06633	220 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	FUS1	P11710	512 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	ISY1	P21374	235 aa	Predicted RBP	4.53	□□□□□ -1.68
AVT1	YJR001W	VPS1	P21576	704 aa	Known RBP	4.53	□□□□□ -1.68
AVT1	YJR001W	RRP43	P25359	394 aa	Predicted RBP	4.53	□□□□□ -1.68
AVT1	YJR001W	SPS22	P25380	463 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	RDS1	P25611	832 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	CDC12	P32468	407 aa	Known RBP	4.53	□□□□□ -1.68
AVT1	YJR001W	KAR9	P32526	644 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	CPR5	P35176	225 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	HEL1	P36113	551 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	APE3	P37302	537 aa	Known RBP	4.53	□□□□□ -1.68
AVT1	YJR001W	SRP68	P38687	599 aa	Known RBP	4.53	□□□□□ -1.68
AVT1	YJR001W	PNT1	P38969	423 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	LYS9	P38999	446 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	AAD14	P42884	376 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	ALB1	P47019	175 aa	Predicted RBP	4.53	□□□□□ -1.68
AVT1	YJR001W	YLR456W	Q06199	204 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	SEC10	Q06245	871 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	MMR1	Q06324	491 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	PML1	Q07930	204 aa	Predicted RBP	4.53	□□□□□ -1.68
AVT1	YJR001W	RRT8	Q08219	342 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	ABP140	Q08641	628 aa	Known RBP	4.53	□□□□□ -1.68
AVT1	YJR001W	DSE3	Q08729	430 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	ICL2	Q12031	575 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	VIK1	Q12045	647 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	IOC2	Q12072	812 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	SPE3	Q12074	293 aa	Known RBP	4.53	□□□□□ -1.68
AVT1	YJR001W	PSF3	Q12146	194 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	GPM3	Q12326	303 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	USO1	P25386	1790 aa		4.53	□□□□□ -1.68
AVT1	YJR001W	SEC53	P07283	254 aa	Known RBP	4.52	□□□□□ -1.69
AVT1	YJR001W	VAS1	P07806	1104 aa	Known RBP	4.52	□□□□□ -1.69
AVT1	YJR001W	FBP1	P09201	348 aa		4.52	□□□□□ -1.69
AVT1	YJR001W	CDC26	P14724	124 aa		4.52	□□□□□ -1.69
AVT1	YJR001W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
AVT1	YJR001W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
AVT1	YJR001W	ADE2	P21264	571 aa	Known RBP	4.52	□□□□□ -1.69
AVT1	YJR001W	RPC34	P32910	317 aa		4.52	□□□□□ -1.69
AVT1	YJR001W	SLA2	P33338	968 aa		4.52	□□□□□ -1.69
AVT1	YJR001W	UTP11	P34247	250 aa	Predicted RBP	4.52	□□□□□ -1.69
AVT1	YJR001W	YKL077W	P36081	392 aa		4.52	□□□□□ -1.69
AVT1	YJR001W	DAD2	P36162	133 aa		4.52	□□□□□ -1.69
AVT1	YJR001W	YBR242W	P38331	238 aa		4.52	□□□□□ -1.69
AVT1	YJR001W	RGD1	P38339	666 aa		4.52	□□□□□ -1.69
AVT1	YJR001W	YHR097C	P38809	366 aa	Known RBP	4.52	□□□□□ -1.69
AVT1	YJR001W	YDR089W	P38966	869 aa		4.52	□□□□□ -1.69
AVT1	YJR001W	PSD1	P39006	500 aa		4.52	□□□□□ -1.69
AVT1	YJR001W	ULP2	P40537	1034 aa	Predicted RBP	4.52	□□□□□ -1.69
AVT1	YJR001W	VMA10	P48836	114 aa	Known RBP	4.52	□□□□□ -1.69
AVT1	YJR001W	PSP1	P50896	841 aa	Known RBP	4.52	□□□□□ -1.69
AVT1	YJR001W	CUL3	P53202	744 aa		4.52	□□□□□ -1.69
AVT1	YJR001W	YGR054W	P53235	642 aa	Known RBP	4.52	□□□□□ -1.69
AVT1	YJR001W	YNL146W	P53906	100 aa		4.52	□□□□□ -1.69
AVT1	YJR001W	MTD1	Q02046	320 aa	Known RBP	4.52	□□□□□ -1.69
AVT1	YJR001W	EGD1	Q02642	157 aa	Known RBP	4.52	□□□□□ -1.69
AVT1	YJR001W	INA17	Q02888	182 aa		4.52	□□□□□ -1.69
AVT1	YJR001W	FRK1	Q03002	865 aa	Predicted RBP	4.52	□□□□□ -1.69
AVT1	YJR001W	JIP4	Q03361	876 aa		4.52	□□□□□ -1.69
AVT1	YJR001W	UTP5	Q04177	643 aa	Known RBP	4.52	□□□□□ -1.69
AVT1	YJR001W	DYN3	Q04949	312 aa		4.52	□□□□□ -1.69
AVT1	YJR001W	RBS1	Q05672	457 aa	Known RBP	4.52	□□□□□ -1.69
AVT1	YJR001W	DIB1	Q06819	143 aa	Predicted RBP	4.52	□□□□□ -1.69
AVT1	YJR001W	IWR1	Q07532	353 aa	Predicted RBP	4.52	□□□□□ -1.69
AVT1	YJR001W	NGL1	Q08213	363 aa	Known RBP	4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms