RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W THI72Q08579 599 aa6.42□□□□□ -1.38
PRE3YJL001W YGR161W-CQ3E744 92 aa6.42□□□□□ -1.38
PRE3YJL001W PAB1P04147 577 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38 RIP-Chip
PRE3YJL001W ERG6P25087 383 aaKnown RBP6.41□□□□□ -1.38
PRE3YJL001W PMI40P29952 429 aaKnown RBP6.41□□□□□ -1.38
PRE3YJL001W HBS1P32769 611 aaKnown RBP6.41□□□□□ -1.38
PRE3YJL001W WBP1P33767 430 aaKnown RBP6.41□□□□□ -1.38
PRE3YJL001W BET3P36149 193 aa6.41□□□□□ -1.38
PRE3YJL001W URA8P38627 578 aaPredicted RBP6.41□□□□□ -1.38
PRE3YJL001W YHR078WP38799 552 aa6.41□□□□□ -1.38
PRE3YJL001W LTP1P40347 161 aa6.41□□□□□ -1.38
PRE3YJL001W AIM23P47015 356 aa6.41□□□□□ -1.38
PRE3YJL001W MRX6P48564 524 aa6.41□□□□□ -1.38
PRE3YJL001W SUN4P53616 420 aa6.41□□□□□ -1.38
PRE3YJL001W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38 RIP-Chip
PRE3YJL001W EBS1Q03466 884 aaKnown RBP6.41□□□□□ -1.38
PRE3YJL001W HRK1Q08732 759 aaKnown RBP6.41□□□□□ -1.38
PRE3YJL001W YLR046CQ12253 270 aa6.41□□□□□ -1.38
PRE3YJL001W EMP46Q12396 444 aa6.41□□□□□ -1.38
PRE3YJL001W NAG1Q8TGN9 163 aa6.41□□□□□ -1.38
PRE3YJL001W MEC1P38111 2368 aa6.41□□□□□ -1.38
PRE3YJL001W RPS3P05750 240 aaKnown RBP6.4□□□□□ -1.38
PRE3YJL001W GPA1P08539 472 aa6.4□□□□□ -1.38
PRE3YJL001W RPL11AP0C0W9 174 aaKnown RBP6.4□□□□□ -1.38
PRE3YJL001W PYC1P11154 1178 aaKnown RBP6.4□□□□□ -1.38
PRE3YJL001W AAR2P32357 355 aaPredicted RBP6.4□□□□□ -1.38
PRE3YJL001W ELM1P32801 640 aa6.4□□□□□ -1.38
PRE3YJL001W TYE7P33122 291 aaPredicted RBP6.4□□□□□ -1.38
PRE3YJL001W RPC25P35718 212 aa6.4□□□□□ -1.38
PRE3YJL001W HSL7P38274 827 aa6.4□□□□□ -1.38
PRE3YJL001W CBR1P38626 284 aaKnown RBP6.4□□□□□ -1.38
PRE3YJL001W GUS1P46655 708 aaKnown RBP RIP-Chip data6.4□□□□□ -1.38not detected
PRE3YJL001W YJR142WP47173 342 aa6.4□□□□□ -1.38
PRE3YJL001W TAN1P53072 289 aaPredicted RBP6.4□□□□□ -1.38
PRE3YJL001W NRM1P53718 249 aa6.4□□□□□ -1.38
PRE3YJL001W SWS2P53937 143 aa6.4□□□□□ -1.38
PRE3YJL001W KTR6P54070 446 aa6.4□□□□□ -1.38
PRE3YJL001W PIR1Q03178 341 aa6.4□□□□□ -1.38
PRE3YJL001W VMS1Q04311 632 aaKnown RBP6.4□□□□□ -1.38
PRE3YJL001W YFT2Q06676 274 aa6.4□□□□□ -1.38
PRE3YJL001W PEX15Q08215 383 aa6.4□□□□□ -1.38
PRE3YJL001W RPL11BQ3E757 174 aaPredicted RBP6.4□□□□□ -1.38
PRE3YJL001W YIL046W-AQ3E7Z4 54 aa6.4□□□□□ -1.38
PRE3YJL001W HBN1Q96VH4 193 aa6.4□□□□□ -1.38
PRE3YJL001W RPL1AP0CX43 217 aaKnown RBP6.39□□□□□ -1.39
PRE3YJL001W RPL1BP0CX44 217 aaKnown RBP6.39□□□□□ -1.39
PRE3YJL001W DAL81P21657 970 aa6.39□□□□□ -1.39
PRE3YJL001W GEX1P25596 615 aa6.39□□□□□ -1.39
PRE3YJL001W SFA1P32771 386 aa6.39□□□□□ -1.39
PRE3YJL001W SRB2P34162 210 aa6.39□□□□□ -1.39
PRE3YJL001W GEX2P36173 615 aa6.39□□□□□ -1.39
PRE3YJL001W ASG1P40467 964 aa6.39□□□□□ -1.39
PRE3YJL001W YIR014WP40570 242 aa6.39□□□□□ -1.39
PRE3YJL001W HYR1P40581 163 aaKnown RBP6.39□□□□□ -1.39
PRE3YJL001W SNG1P46950 547 aa6.39□□□□□ -1.39
PRE3YJL001W AMA1P50082 593 aa6.39□□□□□ -1.39
PRE3YJL001W HOP2P53187 214 aa6.39□□□□□ -1.39
PRE3YJL001W ESBP6P53918 673 aa6.39□□□□□ -1.39
PRE3YJL001W YPL113CQ02961 396 aa6.39□□□□□ -1.39
PRE3YJL001W TRM82Q03774 444 aa6.39□□□□□ -1.39
PRE3YJL001W ARA2Q04212 335 aa6.39□□□□□ -1.39
PRE3YJL001W RPC11Q04307 110 aaPredicted RBP6.39□□□□□ -1.39
PRE3YJL001W THI20Q08224 551 aa6.39□□□□□ -1.39
PRE3YJL001W GAL4P04386 881 aa6.38□□□□□ -1.39
PRE3YJL001W CDC33P07260 213 aaKnown RBP6.38□□□□□ -1.39
PRE3YJL001W MRC1P25588 1096 aa6.38□□□□□ -1.39
PRE3YJL001W RSC6P25632 483 aa6.38□□□□□ -1.39
PRE3YJL001W CIN8P27895 1000 aa6.38□□□□□ -1.39
PRE3YJL001W PMT1P33775 817 aa6.38□□□□□ -1.39
PRE3YJL001W TRZ1P36159 838 aaPredicted RBP6.38□□□□□ -1.39
PRE3YJL001W PXL1P36166 706 aa6.38□□□□□ -1.39
PRE3YJL001W YBR238CP38330 731 aaKnown RBP6.38□□□□□ -1.39
PRE3YJL001W TMA108P40462 946 aa6.38□□□□□ -1.39
PRE3YJL001W HSV2P50079 448 aaPredicted RBP6.38□□□□□ -1.39
PRE3YJL001W BUD9P53226 547 aa6.38□□□□□ -1.39
PRE3YJL001W HST1P53685 503 aa6.38□□□□□ -1.39
PRE3YJL001W PRM1P53835 661 aa6.38□□□□□ -1.39
PRE3YJL001W YLR456WQ06199 204 aa6.38□□□□□ -1.39
PRE3YJL001W RKM5Q12367 367 aa6.38□□□□□ -1.39
PRE3YJL001W BI2P03873 423 aa6.37□□□□□ -1.39
PRE3YJL001W RIP1P08067 215 aa6.37□□□□□ -1.39
PRE3YJL001W RPS4AP0CX35 261 aaKnown RBP6.37□□□□□ -1.39
PRE3YJL001W RPS4BP0CX36 261 aaKnown RBP6.37□□□□□ -1.39
PRE3YJL001W PUT4P15380 627 aa6.37□□□□□ -1.39
PRE3YJL001W MET16P18408 261 aaPredicted RBP6.37□□□□□ -1.39
PRE3YJL001W DBP2P24783 546 aaKnown RBP6.37□□□□□ -1.39
PRE3YJL001W TSR4P25040 408 aa6.37□□□□□ -1.39
PRE3YJL001W NPR3P38742 1146 aa6.37□□□□□ -1.39
PRE3YJL001W LAM1P38851 1228 aa6.37□□□□□ -1.39
PRE3YJL001W BDH2P39713 417 aa6.37□□□□□ -1.39
PRE3YJL001W STL1P39932 569 aa6.37□□□□□ -1.39
PRE3YJL001W EDC3P39998 551 aaKnown RBP6.37□□□□□ -1.39
PRE3YJL001W YER189WP40104 122 aa6.37□□□□□ -1.39
PRE3YJL001W CCT5P40413 562 aaKnown RBP6.37□□□□□ -1.39
PRE3YJL001W DSN1P40568 576 aa6.37□□□□□ -1.39
PRE3YJL001W CIR1P42940 261 aa6.37□□□□□ -1.39
PRE3YJL001W EMC4P53073 190 aa6.37□□□□□ -1.39
PRE3YJL001W SNO2P53823 222 aa6.37□□□□□ -1.39
PRE3YJL001W TPP1Q03796 238 aa6.37□□□□□ -1.39
PRE3YJL001W PUS7Q08647 676 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms