RNA–Protein interactions for RNA: YIR011C

STS1, Transcript of Protein required for localizing proteasomes to the nucleus, yeast

Gene STS1, Length 960 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STS1	YIR011C	PXA2	P34230	853 aa		7.51	□□□□□ -1.21
STS1	YIR011C	SMF2	P38778	549 aa		7.51	□□□□□ -1.21
STS1	YIR011C	DPH1	P40487	425 aa	Known RBP	7.51	□□□□□ -1.21
STS1	YIR011C	ERR3	P42222	437 aa		7.51	□□□□□ -1.21
STS1	YIR011C	SAE2	P46946	345 aa		7.51	□□□□□ -1.21
STS1	YIR011C	SIP4	P46954	829 aa		7.51	□□□□□ -1.21
STS1	YIR011C	TRF5	P48561	642 aa	Known RBP	7.51	□□□□□ -1.21
STS1	YIR011C	RIM21	P48565	533 aa		7.51	□□□□□ -1.21
STS1	YIR011C	ASN2	P49090	572 aa	Known RBP	7.51	□□□□□ -1.21
STS1	YIR011C	AIM14	P53109	570 aa		7.51	□□□□□ -1.21
STS1	YIR011C	ORC3	P54790	616 aa		7.51	□□□□□ -1.21
STS1	YIR011C	CLU1	Q03690	1277 aa	Known RBP	7.51	□□□□□ -1.21
STS1	YIR011C	YMR027W	Q04371	470 aa		7.51	□□□□□ -1.21
STS1	YIR011C	ACM1	Q08981	209 aa		7.51	□□□□□ -1.21
STS1	YIR011C	YLR046C	Q12253	270 aa		7.51	□□□□□ -1.21
STS1	YIR011C	COX5A	P00424	153 aa		7.5	□□□□□ -1.21
STS1	YIR011C	SCH9	P11792	824 aa	Known RBP	7.5	□□□□□ -1.21
STS1	YIR011C	MRPL25	P23369	157 aa		7.5	□□□□□ -1.21
STS1	YIR011C	AAT2	P23542	418 aa	Known RBP	7.5	□□□□□ -1.21
STS1	YIR011C	TSR4	P25040	408 aa		7.5	□□□□□ -1.21
STS1	YIR011C	GEX1	P25596	615 aa		7.5	□□□□□ -1.21
STS1	YIR011C	URA7	P28274	579 aa	Known RBP	7.5	□□□□□ -1.21
STS1	YIR011C	PMI40	P29952	429 aa	Known RBP	7.5	□□□□□ -1.21
STS1	YIR011C	GEX2	P36173	615 aa		7.5	□□□□□ -1.21
STS1	YIR011C	ARP1	P38696	384 aa		7.5	□□□□□ -1.21
STS1	YIR011C	LSB3	P43603	459 aa	Known RBP	7.5	□□□□□ -1.21
STS1	YIR011C	BUD13	P46947	266 aa	Predicted RBP	7.5	□□□□□ -1.21
STS1	YIR011C	AMA1	P50082	593 aa		7.5	□□□□□ -1.21
STS1	YIR011C	YNR061C	P53747	219 aa		7.5	□□□□□ -1.21
STS1	YIR011C	PRM1	P53835	661 aa		7.5	□□□□□ -1.21
STS1	YIR011C	IPI3	P53877	555 aa		7.5	□□□□□ -1.21
STS1	YIR011C	EFM6	P53970	246 aa		7.5	□□□□□ -1.21
STS1	YIR011C	SHR3	Q02774	210 aa		7.5	□□□□□ -1.21
STS1	YIR011C	SLU7	Q02775	382 aa	Known RBP	7.5	□□□□□ -1.21
STS1	YIR011C	ARP9	Q05123	467 aa		7.5	□□□□□ -1.21
STS1	YIR011C	CMS1	Q07897	291 aa	Known RBP	7.5	□□□□□ -1.21
STS1	YIR011C	OCA6	Q12454	224 aa		7.5	□□□□□ -1.21
STS1	YIR011C	CMD1	P06787	147 aa	Known RBP	7.49	□□□□□ -1.21
STS1	YIR011C	MNE1	P24720	663 aa		7.49	□□□□□ -1.21
STS1	YIR011C	KAR4	P25583	335 aa		7.49	□□□□□ -1.21
STS1	YIR011C	UTR2	P32623	467 aa		7.49	□□□□□ -1.21
STS1	YIR011C	STE5	P32917	917 aa		7.49	□□□□□ -1.21
STS1	YIR011C	MIC19	P43594	170 aa		7.49	□□□□□ -1.21
STS1	YIR011C	RMD8	P43620	662 aa		7.49	□□□□□ -1.21
STS1	YIR011C	ATG36	P46983	293 aa		7.49	□□□□□ -1.21
STS1	YIR011C	YJR115W	P47152	169 aa		7.49	□□□□□ -1.21
STS1	YIR011C	STR3	P53101	465 aa	Known RBP	7.49	□□□□□ -1.21
STS1	YIR011C	NMA2	P53204	395 aa		7.49	□□□□□ -1.21
STS1	YIR011C	NOP15	P53927	220 aa	Predicted RBP	7.49	□□□□□ -1.21
STS1	YIR011C	GSF2	Q04697	403 aa	Known RBP	7.49	□□□□□ -1.21
STS1	YIR011C	YPR114W	Q06107	315 aa		7.49	□□□□□ -1.21
STS1	YIR011C	LDB17	Q12342	491 aa		7.49	□□□□□ -1.21
STS1	YIR011C	MSF1	P08425	469 aa		7.48	□□□□□ -1.21
STS1	YIR011C	HOM2	P13663	365 aa	Known RBP	7.48	□□□□□ -1.21
STS1	YIR011C	CBF1	P17106	351 aa		7.48	□□□□□ -1.21
STS1	YIR011C	EMC1	P25574	760 aa		7.48	□□□□□ -1.21
STS1	YIR011C	URA10	P30402	227 aa		7.48	□□□□□ -1.21
STS1	YIR011C	PYC2	P32327	1180 aa	Known RBP	7.48	□□□□□ -1.21
STS1	YIR011C	SMI1	P32566	505 aa		7.48	□□□□□ -1.21
STS1	YIR011C	MKS1	P34072	584 aa		7.48	□□□□□ -1.21
STS1	YIR011C	TFA2	P36145	328 aa		7.48	□□□□□ -1.21
STS1	YIR011C	MAK5	P38112	773 aa	Predicted RBP	7.48	□□□□□ -1.21
STS1	YIR011C	GDH3	P39708	457 aa		7.48	□□□□□ -1.21
STS1	YIR011C	TAH11	P47112	604 aa		7.48	□□□□□ -1.21
STS1	YIR011C	VEL1	P53058	206 aa		7.48	□□□□□ -1.21
STS1	YIR011C	TEP1	P53916	434 aa		7.48	□□□□□ -1.21
STS1	YIR011C	RPL34A	P87262	121 aa	Predicted RBP	7.48	□□□□□ -1.21
STS1	YIR011C	PIR1	Q03178	341 aa		7.48	□□□□□ -1.21
STS1	YIR011C	ADY3	Q07732	790 aa		7.48	□□□□□ -1.21
STS1	YIR011C	CUE5	Q08412	411 aa	Known RBP	7.48	□□□□□ -1.21
STS1	YIR011C	RSB1	Q08417	382 aa		7.48	□□□□□ -1.21
STS1	YIR011C	NOP58	Q12499	511 aa	Known RBP	7.48	□□□□□ -1.21
STS1	YIR011C	MEX67	Q99257	599 aa	Known RBP	7.48	□□□□□ -1.21
STS1	YIR011C	ILS1	P09436	1072 aa	Known RBP	7.47	□□□□□ -1.21
STS1	YIR011C	GPA2	P10823	449 aa		7.47	□□□□□ -1.21
STS1	YIR011C	HEM15	P16622	393 aa		7.47	□□□□□ -1.21
STS1	YIR011C	YSP3	P25036	478 aa		7.47	□□□□□ -1.21
STS1	YIR011C	TPS2	P31688	896 aa	Known RBP	7.47	□□□□□ -1.21
STS1	YIR011C	ECM32	P32644	1121 aa	Known RBP	7.47	□□□□□ -1.21
STS1	YIR011C	SRP101	P32916	621 aa		7.47	□□□□□ -1.21
STS1	YIR011C	CTF13	P35203	478 aa		7.47	□□□□□ -1.21
STS1	YIR011C	YBP1	P38315	674 aa		7.47	□□□□□ -1.21
STS1	YIR011C	HXT5	P38695	592 aa		7.47	□□□□□ -1.21
STS1	YIR011C	YIR007W	P40566	764 aa		7.47	□□□□□ -1.21
STS1	YIR011C	YJR124C	P47159	448 aa		7.47	□□□□□ -1.21
STS1	YIR011C	SPC105	P53148	917 aa		7.47	□□□□□ -1.21
STS1	YIR011C	KTR5	P53966	522 aa	Predicted RBP	7.47	□□□□□ -1.21
STS1	YIR011C	PEX13	P80667	386 aa		7.47	□□□□□ -1.21
STS1	YIR011C	RNT1	Q02555	471 aa		7.47	□□□□□ -1.21
STS1	YIR011C	YMR160W	Q03823	816 aa		7.47	□□□□□ -1.21
STS1	YIR011C	PPN1	Q04119	674 aa		7.47	□□□□□ -1.21
STS1	YIR011C	HSF1	P10961	833 aa		7.46	□□□□□ -1.22
STS1	YIR011C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	7.46	□□□□□ -1.22	not detected
STS1	YIR011C	PMA2	P19657	947 aa		7.46	□□□□□ -1.22
STS1	YIR011C	DCC1	P25559	380 aa		7.46	□□□□□ -1.22
STS1	YIR011C	GID7	P25569	745 aa		7.46	□□□□□ -1.22
STS1	YIR011C	YCL068C	P25593	260 aa		7.46	□□□□□ -1.22
STS1	YIR011C	AEP1	P32493	518 aa		7.46	□□□□□ -1.22
STS1	YIR011C	PPX1	P38698	397 aa		7.46	□□□□□ -1.22
STS1	YIR011C	REV7	P38927	245 aa		7.46	□□□□□ -1.22

Retrieved 100 of 5,963 RNA–protein pairs in 158.6 ms