RNA–Protein interactions for RNA: YIL170W

HXT12, Transcript of Possible pseudogene in strain S288C, yeast

Gene HXT12, Length 1,374 nt, Biotype pseudogene, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HXT12	YIL170W	MSR1	P38714	643 aa		9.26	□□□□□ -0.93
HXT12	YIL170W	CIN4	P39110	191 aa		9.26	□□□□□ -0.93
HXT12	YIL170W	IPI3	P53877	555 aa		9.26	□□□□□ -0.93
HXT12	YIL170W	NUP100	Q02629	959 aa		9.26	□□□□□ -0.93
HXT12	YIL170W	TRS31	Q03337	283 aa		9.26	□□□□□ -0.93
HXT12	YIL170W	RPN9	Q04062	393 aa	Known RBP	9.26	□□□□□ -0.93
HXT12	YIL170W	PPN1	Q04119	674 aa		9.26	□□□□□ -0.93
HXT12	YIL170W	HEL2	Q05580	639 aa	Known RBP	9.26	□□□□□ -0.93
HXT12	YIL170W	IMA2	Q08295	589 aa		9.26	□□□□□ -0.93
HXT12	YIL170W	YSP3	P25036	478 aa		9.25	□□□□□ -0.93
HXT12	YIL170W	TSR4	P25040	408 aa		9.25	□□□□□ -0.93
HXT12	YIL170W	CDC20	P26309	610 aa		9.25	□□□□□ -0.93
HXT12	YIL170W	TPS2	P31688	896 aa	Known RBP	9.25	□□□□□ -0.93
HXT12	YIL170W	AEP1	P32493	518 aa		9.25	□□□□□ -0.93
HXT12	YIL170W	LTV1	P34078	463 aa		9.25	□□□□□ -0.93
HXT12	YIL170W	YBR259W	P38338	688 aa		9.25	□□□□□ -0.93
HXT12	YIL170W	LRP1	P38801	184 aa	Known RBP	9.25	□□□□□ -0.93
HXT12	YIL170W	BAT1	P38891	393 aa	Known RBP	9.25	□□□□□ -0.93
HXT12	YIL170W	YFL012W	P43580	148 aa		9.25	□□□□□ -0.93
HXT12	YIL170W	BUD13	P46947	266 aa	Predicted RBP	9.25	□□□□□ -0.93
HXT12	YIL170W	COQ5	P49017	307 aa		9.25	□□□□□ -0.93
HXT12	YIL170W	EFM6	P53970	246 aa		9.25	□□□□□ -0.93
HXT12	YIL170W	MET14	Q02196	202 aa		9.25	□□□□□ -0.93
HXT12	YIL170W	URA7	P28274	579 aa	Known RBP	9.24	□□□□□ -0.93
HXT12	YIL170W	BRF1	P29056	596 aa		9.24	□□□□□ -0.93
HXT12	YIL170W	URA10	P30402	227 aa		9.24	□□□□□ -0.93
HXT12	YIL170W	IRS4	P36115	615 aa	Known RBP	9.24	□□□□□ -0.93
HXT12	YIL170W	RPC37	P36121	282 aa		9.24	□□□□□ -0.93
HXT12	YIL170W	PCF11	P39081	626 aa	Predicted RBP	9.24	□□□□□ -0.93
HXT12	YIL170W	SNO2	P53823	222 aa		9.24	□□□□□ -0.93
HXT12	YIL170W	YNL143C	P53908	130 aa		9.24	□□□□□ -0.93
HXT12	YIL170W	RPL22B	P56628	122 aa	Known RBP	9.24	□□□□□ -0.93
HXT12	YIL170W	RPL34A	P87262	121 aa	Predicted RBP	9.24	□□□□□ -0.93
HXT12	YIL170W	PNP1	Q05788	311 aa		9.24	□□□□□ -0.93
HXT12	YIL170W	JIP5	Q06214	492 aa	Predicted RBP	9.24	□□□□□ -0.93
HXT12	YIL170W	TEF1	P02994	458 aa	Known RBP	9.24	□□□□□ -0.93
HXT12	YIL170W	SPT15	P13393	240 aa	Known RBP	9.24	□□□□□ -0.93
HXT12	YIL170W	RPO26	P20435	155 aa		9.24	□□□□□ -0.93
HXT12	YIL170W	PMT1	P33775	817 aa		9.24	□□□□□ -0.93
HXT12	YIL170W	SRX1	P36077	127 aa		9.24	□□□□□ -0.93
HXT12	YIL170W	LAS1	P36146	502 aa	Predicted RBP	9.24	□□□□□ -0.93
HXT12	YIL170W	SPP381	P38282	291 aa	Predicted RBP	9.24	□□□□□ -0.93
HXT12	YIL170W	DPH1	P40487	425 aa	Known RBP	9.24	□□□□□ -0.93
HXT12	YIL170W	NBP35	P52920	328 aa		9.24	□□□□□ -0.93
HXT12	YIL170W	ATG10	Q07879	167 aa		9.24	□□□□□ -0.93
HXT12	YIL170W	BUD20	Q08004	166 aa	Predicted RBP	9.24	□□□□□ -0.93
HXT12	YIL170W	NUR1	Q12066	484 aa		9.24	□□□□□ -0.93
HXT12	YIL170W	GNT1	Q12096	491 aa		9.24	□□□□□ -0.93
HXT12	YIL170W	Q0182	Q9ZZW1	134 aa		9.24	□□□□□ -0.93
HXT12	YIL170W	CHL1	P22516	861 aa	Predicted RBP	9.23	□□□□□ -0.93
HXT12	YIL170W	EMC1	P25574	760 aa		9.23	□□□□□ -0.93
HXT12	YIL170W	IMP3	P32899	183 aa	Predicted RBP	9.23	□□□□□ -0.93
HXT12	YIL170W	CTF13	P35203	478 aa		9.23	□□□□□ -0.93
HXT12	YIL170W	TIF34	P40217	347 aa	Known RBP	9.23	□□□□□ -0.93
HXT12	YIL170W	CEP3	P40969	608 aa		9.23	□□□□□ -0.93
HXT12	YIL170W	PXA1	P41909	870 aa		9.23	□□□□□ -0.93
HXT12	YIL170W	MNN10	P50108	393 aa	Known RBP	9.23	□□□□□ -0.93
HXT12	YIL170W	COG1	P53079	417 aa		9.23	□□□□□ -0.93
HXT12	YIL170W	YGL140C	P53120	1219 aa		9.23	□□□□□ -0.93
HXT12	YIL170W	YMR027W	Q04371	470 aa		9.23	□□□□□ -0.93
HXT12	YIL170W	YLR149C	Q99296	730 aa		9.23	□□□□□ -0.93
HXT12	YIL170W	NSP1	P14907	823 aa	Known RBP	9.22	□□□□□ -0.93
HXT12	YIL170W	BEM1	P29366	551 aa		9.22	□□□□□ -0.93
HXT12	YIL170W	MAK5	P38112	773 aa	Predicted RBP	9.22	□□□□□ -0.93
HXT12	YIL170W	ALA1	P40825	983 aa	Known RBP	9.22	□□□□□ -0.93
HXT12	YIL170W	NOP15	P53927	220 aa	Predicted RBP	9.22	□□□□□ -0.93
HXT12	YIL170W	YDR132C	Q03900	495 aa		9.22	□□□□□ -0.93
HXT12	YIL170W	NOP6	Q07623	225 aa	Known RBP	9.22	□□□□□ -0.93
HXT12	YIL170W	SLD7	Q08457	257 aa		9.22	□□□□□ -0.93
HXT12	YIL170W	NAG1	Q8TGN9	163 aa		9.22	□□□□□ -0.93
HXT12	YIL170W	SUC2	P00724	532 aa		9.21	□□□□□ -0.94
HXT12	YIL170W	PEP5	P12868	1029 aa		9.21	□□□□□ -0.94
HXT12	YIL170W	POL30	P15873	258 aa	Known RBP	9.21	□□□□□ -0.94
HXT12	YIL170W	KAR4	P25583	335 aa		9.21	□□□□□ -0.94
HXT12	YIL170W	SMI1	P32566	505 aa		9.21	□□□□□ -0.94
HXT12	YIL170W	RRP1	P35178	278 aa	Predicted RBP	9.21	□□□□□ -0.94
HXT12	YIL170W	MRP21	P38175	177 aa		9.21	□□□□□ -0.94
HXT12	YIL170W	IRR1	P40541	1150 aa		9.21	□□□□□ -0.94
HXT12	YIL170W	MIC19	P43594	170 aa		9.21	□□□□□ -0.94
HXT12	YIL170W	DAN4	P47179	1161 aa		9.21	□□□□□ -0.94
HXT12	YIL170W	SWC4	P53201	476 aa		9.21	□□□□□ -0.94
HXT12	YIL170W	NHX1	Q04121	633 aa		9.21	□□□□□ -0.94
HXT12	YIL170W	ADE13	Q05911	482 aa	Known RBP	9.21	□□□□□ -0.94
HXT12	YIL170W	MCP2	Q06567	569 aa		9.21	□□□□□ -0.94
HXT12	YIL170W	SAM4	Q08985	325 aa	Known RBP	9.21	□□□□□ -0.94
HXT12	YIL170W	YOR338W	Q99326	363 aa		9.21	□□□□□ -0.94
HXT12	YIL170W	HSP60	P19882	572 aa	Known RBP	9.2	□□□□□ -0.94
HXT12	YIL170W	UBA1	P22515	1024 aa	Known RBP	9.2	□□□□□ -0.94
HXT12	YIL170W	SLX5	P32828	619 aa	Known RBP	9.2	□□□□□ -0.94
HXT12	YIL170W	SRP72	P38688	640 aa	Known RBP	9.2	□□□□□ -0.94
HXT12	YIL170W	FRE4	P53746	719 aa		9.2	□□□□□ -0.94
HXT12	YIL170W	PET117	Q02771	107 aa		9.2	□□□□□ -0.94
HXT12	YIL170W	CUE5	Q08412	411 aa	Known RBP	9.2	□□□□□ -0.94
HXT12	YIL170W	ACC1	Q00955	2233 aa	Known RBP	9.2	□□□□□ -0.94
HXT12	YIL170W	SPS1	P08458	490 aa		9.19	□□□□□ -0.94
HXT12	YIL170W	INO1	P11986	533 aa		9.19	□□□□□ -0.94
HXT12	YIL170W	AMD1	P15274	810 aa	Known RBP	9.19	□□□□□ -0.94
HXT12	YIL170W	MRPL9	P31334	269 aa		9.19	□□□□□ -0.94
HXT12	YIL170W	GDA1	P32621	518 aa		9.19	□□□□□ -0.94
HXT12	YIL170W	SRP101	P32916	621 aa		9.19	□□□□□ -0.94

Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms