RNA–Protein interactions for RNA: YGR136W

LSB1, Transcript of Negative regulator of actin nucleation-promoting factor activity, yeastyeast

Gene LSB1, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB1YGR136W DRE2P36152 348 aa4.36□□□□□ -1.71
LSB1YGR136W JNM1P36224 373 aa4.36□□□□□ -1.71
LSB1YGR136W TDA3P38758 523 aa4.36□□□□□ -1.71
LSB1YGR136W PMC1P38929 1173 aaPredicted RBP4.36□□□□□ -1.71
LSB1YGR136W CCT4P39078 528 aaKnown RBP4.36□□□□□ -1.71
LSB1YGR136W GPP2P40106 250 aaKnown RBP4.36□□□□□ -1.71
LSB1YGR136W MCM6P53091 1017 aaKnown RBP4.36□□□□□ -1.71
LSB1YGR136W NPY1P53164 384 aa4.36□□□□□ -1.71
LSB1YGR136W YGR021WP53212 290 aa4.36□□□□□ -1.71
LSB1YGR136W ESBP6P53918 673 aa4.36□□□□□ -1.71
LSB1YGR136W TIM8P57744 87 aa4.36□□□□□ -1.71
LSB1YGR136W YVH1Q02256 364 aaKnown RBP4.36□□□□□ -1.71
LSB1YGR136W MUK1Q02866 612 aa4.36□□□□□ -1.71
LSB1YGR136W NGL3Q03210 505 aa4.36□□□□□ -1.71
LSB1YGR136W YLR297WQ05899 129 aa4.36□□□□□ -1.71
LSB1YGR136W OMS1Q06668 471 aa4.36□□□□□ -1.71
LSB1YGR136W ATG23Q06671 453 aa4.36□□□□□ -1.71
LSB1YGR136W THI21Q08975 551 aa4.36□□□□□ -1.71
LSB1YGR136W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
LSB1YGR136W PRC1P00729 532 aa4.35□□□□□ -1.71
LSB1YGR136W SNF1P06782 633 aaKnown RBP4.35□□□□□ -1.71
LSB1YGR136W KAR1P11927 433 aa4.35□□□□□ -1.71
LSB1YGR136W SST2P11972 698 aaKnown RBP4.35□□□□□ -1.71
LSB1YGR136W TUP1P16649 713 aa4.35□□□□□ -1.71
LSB1YGR136W SEC21P32074 935 aaKnown RBP4.35□□□□□ -1.71
LSB1YGR136W COT1P32798 439 aa4.35□□□□□ -1.71
LSB1YGR136W BUD2P33314 1104 aa4.35□□□□□ -1.71
LSB1YGR136W YKL023WP36103 277 aaKnown RBP4.35□□□□□ -1.71
LSB1YGR136W HEL1P36113 551 aa4.35□□□□□ -1.71
LSB1YGR136W POA1P38218 177 aa4.35□□□□□ -1.71
LSB1YGR136W ERC1P38767 581 aa4.35□□□□□ -1.71
LSB1YGR136W LCB2P40970 561 aa4.35□□□□□ -1.71
LSB1YGR136W YFL052WP43551 465 aa4.35□□□□□ -1.71
LSB1YGR136W GCV2P49095 1034 aa4.35□□□□□ -1.71
LSB1YGR136W AIM14P53109 570 aa4.35□□□□□ -1.71
LSB1YGR136W PUS2P53167 370 aa4.35□□□□□ -1.71
LSB1YGR136W YGR012WP53206 393 aa4.35□□□□□ -1.71
LSB1YGR136W BTN2P53286 410 aa4.35□□□□□ -1.71
LSB1YGR136W RTT102P53330 157 aa4.35□□□□□ -1.71
LSB1YGR136W YNL134CP53912 376 aaKnown RBP4.35□□□□□ -1.71
LSB1YGR136W ARK1P53974 638 aa4.35□□□□□ -1.71
LSB1YGR136W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
LSB1YGR136W SKY1Q03656 742 aa4.35□□□□□ -1.71
LSB1YGR136W INP2Q03824 705 aa4.35□□□□□ -1.71
LSB1YGR136W ARO80Q04052 950 aa4.35□□□□□ -1.71
LSB1YGR136W LRS4Q04087 347 aaKnown RBP4.35□□□□□ -1.71
LSB1YGR136W RRB1Q04225 511 aaKnown RBP4.35□□□□□ -1.71
LSB1YGR136W YDR338CQ05497 695 aa4.35□□□□□ -1.71
LSB1YGR136W CDA1Q06702 301 aa4.35□□□□□ -1.71
LSB1YGR136W RIF1P29539 1916 aa4.34□□□□□ -1.71
LSB1YGR136W MIH1P23748 554 aa4.34□□□□□ -1.71
LSB1YGR136W MUD1P32605 298 aaKnown RBP4.34□□□□□ -1.71
LSB1YGR136W TMT1P32643 299 aa4.34□□□□□ -1.71
LSB1YGR136W NUF2P33895 451 aa4.34□□□□□ -1.71
LSB1YGR136W RCK2P38623 610 aa4.34□□□□□ -1.71
LSB1YGR136W SMF1P38925 575 aa4.34□□□□□ -1.71
LSB1YGR136W SPC72P39723 622 aa4.34□□□□□ -1.71
LSB1YGR136W BFA1P47113 574 aa4.34□□□□□ -1.71
LSB1YGR136W ALT2P52892 507 aa4.34□□□□□ -1.71
LSB1YGR136W ZIP2P53061 704 aa4.34□□□□□ -1.71
LSB1YGR136W SHE10P53075 577 aa4.34□□□□□ -1.71
LSB1YGR136W SLD3P53135 668 aa4.34□□□□□ -1.71
LSB1YGR136W TAM41P53230 385 aa4.34□□□□□ -1.71
LSB1YGR136W YNL146WP53906 100 aa4.34□□□□□ -1.71
LSB1YGR136W UBX4P54730 416 aa4.34□□□□□ -1.71
LSB1YGR136W TGL2P54857 326 aa4.34□□□□□ -1.71
LSB1YGR136W ECM9Q02202 377 aa4.34□□□□□ -1.71
LSB1YGR136W HOT1Q03213 719 aa4.34□□□□□ -1.71
LSB1YGR136W YMR018WQ04364 514 aa4.34□□□□□ -1.71
LSB1YGR136W ARR1Q06596 294 aa4.34□□□□□ -1.71
LSB1YGR136W CMS1Q07897 291 aaKnown RBP4.34□□□□□ -1.71
LSB1YGR136W XYL2Q07993 356 aa4.34□□□□□ -1.71
LSB1YGR136W IES4Q08561 116 aa4.34□□□□□ -1.71
LSB1YGR136W ABP140Q08641 628 aaKnown RBP4.34□□□□□ -1.71
LSB1YGR136W CDC8P00572 216 aa4.33□□□□□ -1.72
LSB1YGR136W PRP16P15938 1071 aaPredicted RBP4.33□□□□□ -1.72
LSB1YGR136W YCL002CP25565 263 aa4.33□□□□□ -1.72
LSB1YGR136W PTP2P29461 750 aa4.33□□□□□ -1.72
LSB1YGR136W DPH2P32461 534 aa4.33□□□□□ -1.72
LSB1YGR136W SKG6P32900 734 aaPredicted RBP4.33□□□□□ -1.72
LSB1YGR136W NIC96P34077 839 aa4.33□□□□□ -1.72
LSB1YGR136W PTH2P34222 208 aa4.33□□□□□ -1.72
LSB1YGR136W BLI1P35727 113 aa4.33□□□□□ -1.72
LSB1YGR136W EXO84P38261 753 aa4.33□□□□□ -1.72
LSB1YGR136W VID24P38263 362 aa4.33□□□□□ -1.72
LSB1YGR136W YSW1P38280 609 aa4.33□□□□□ -1.72
LSB1YGR136W BIT2P38346 545 aa4.33□□□□□ -1.72
LSB1YGR136W RIM4P38741 713 aa4.33□□□□□ -1.72
LSB1YGR136W LAM5P43560 674 aa4.33□□□□□ -1.72
LSB1YGR136W RPC17P47076 161 aa4.33□□□□□ -1.72
LSB1YGR136W KAP114P53067 1004 aa4.33□□□□□ -1.72
LSB1YGR136W CUL3P53202 744 aa4.33□□□□□ -1.72
LSB1YGR136W JJJ1P53863 590 aa4.33□□□□□ -1.72
LSB1YGR136W VTC3Q02725 835 aa4.33□□□□□ -1.72
LSB1YGR136W VTI1Q04338 217 aa4.33□□□□□ -1.72
LSB1YGR136W EMI2Q04409 500 aaKnown RBP4.33□□□□□ -1.72
LSB1YGR136W STE23Q06010 1027 aa4.33□□□□□ -1.72
LSB1YGR136W GGA1Q06336 557 aa4.33□□□□□ -1.72
LSB1YGR136W NOP6Q07623 225 aaKnown RBP4.33□□□□□ -1.72
LSB1YGR136W PEX15Q08215 383 aa4.33□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms