RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C FUB1P25659 250 aa6.55□□□□□ -1.36
YPT1YFL038C CBF5P33322 483 aaKnown RBP RIP-Chip data6.55□□□□□ -1.36not detected
YPT1YFL038C GIP1P38229 639 aa6.55□□□□□ -1.36
YPT1YFL038C TDA11P38854 504 aa6.55□□□□□ -1.36
YPT1YFL038C TVP23P38962 199 aa6.55□□□□□ -1.36
YPT1YFL038C BEM4P39011 633 aa6.55□□□□□ -1.36
YPT1YFL038C ESL1P40456 1118 aa6.55□□□□□ -1.36
YPT1YFL038C ROK1P45818 564 aaPredicted RBP6.55□□□□□ -1.36
YPT1YFL038C GUF1P46943 645 aa6.55□□□□□ -1.36
YPT1YFL038C SNG1P46950 547 aa6.55□□□□□ -1.36
YPT1YFL038C VMA10P48836 114 aaKnown RBP6.55□□□□□ -1.36
YPT1YFL038C BRE5P53741 515 aaKnown RBP6.55□□□□□ -1.36
YPT1YFL038C SIW14P53965 281 aa6.55□□□□□ -1.36
YPT1YFL038C CSN9Q03981 162 aa6.55□□□□□ -1.36
YPT1YFL038C HPT1Q04178 221 aaKnown RBP6.55□□□□□ -1.36
YPT1YFL038C SPG3Q04398 127 aaPredicted RBP6.55□□□□□ -1.36
YPT1YFL038C JIP5Q06214 492 aaPredicted RBP6.55□□□□□ -1.36
YPT1YFL038C HDA3Q06623 655 aa6.55□□□□□ -1.36
YPT1YFL038C SWC7Q06707 132 aa6.55□□□□□ -1.36
YPT1YFL038C PSR1Q07800 427 aa6.55□□□□□ -1.36
YPT1YFL038C ESC8Q08119 714 aa6.55□□□□□ -1.36
YPT1YFL038C YOL019WQ08157 551 aa6.55□□□□□ -1.36
YPT1YFL038C GET4Q12125 312 aa6.55□□□□□ -1.36
YPT1YFL038C SUT2Q12286 268 aa6.55□□□□□ -1.36
YPT1YFL038C MDM20Q12387 796 aaKnown RBP6.55□□□□□ -1.36
YPT1YFL038C NKP1Q12493 238 aa6.55□□□□□ -1.36
YPT1YFL038C UBR2Q07963 1872 aa6.55□□□□□ -1.36
YPT1YFL038C STE2D6VTK4 431 aa6.54□□□□□ -1.36
YPT1YFL038C COX5AP00424 153 aa6.54□□□□□ -1.36
YPT1YFL038C COX6P00427 148 aa6.54□□□□□ -1.36
YPT1YFL038C SEC15P22224 910 aa6.54□□□□□ -1.36
YPT1YFL038C TRX2P22803 104 aaKnown RBP6.54□□□□□ -1.36
YPT1YFL038C ZIP1P31111 875 aa6.54□□□□□ -1.36
YPT1YFL038C RAD16P31244 790 aa6.54□□□□□ -1.36
YPT1YFL038C DPH5P32469 300 aaPredicted RBP6.54□□□□□ -1.36
YPT1YFL038C SPT16P32558 1035 aaKnown RBP6.54□□□□□ -1.36
YPT1YFL038C EAP1P36041 632 aaKnown RBP6.54□□□□□ -1.36
YPT1YFL038C PDX3P38075 228 aaKnown RBP6.54□□□□□ -1.36
YPT1YFL038C YBR284WP38150 797 aa6.54□□□□□ -1.36
YPT1YFL038C MRP21P38175 177 aa6.54□□□□□ -1.36
YPT1YFL038C MGS1P40151 587 aa6.54□□□□□ -1.36
YPT1YFL038C PDS1P40316 373 aaPredicted RBP6.54□□□□□ -1.36
YPT1YFL038C DLD2P46681 530 aaKnown RBP6.54□□□□□ -1.36
YPT1YFL038C PEX8P53248 589 aa6.54□□□□□ -1.36
YPT1YFL038C YNL115CP53925 644 aa6.54□□□□□ -1.36
YPT1YFL038C CDC14Q00684 551 aa6.54□□□□□ -1.36
YPT1YFL038C YDR109CQ04585 715 aa6.54□□□□□ -1.36
YPT1YFL038C SPC2Q04969 178 aa6.54□□□□□ -1.36
YPT1YFL038C SEC10Q06245 871 aa6.54□□□□□ -1.36
YPT1YFL038C CDA1Q06702 301 aa6.54□□□□□ -1.36
YPT1YFL038C ASA1Q06822 443 aa6.54□□□□□ -1.36
YPT1YFL038C YDL121CQ07541 149 aa6.54□□□□□ -1.36
YPT1YFL038C PKH2Q12236 1081 aaKnown RBP6.54□□□□□ -1.36
YPT1YFL038C ATG34Q12292 412 aa6.54□□□□□ -1.36
YPT1YFL038C ADF1Q2V2Q1 113 aa6.54□□□□□ -1.36
YPT1YFL038C ATP6P00854 259 aa6.53□□□□□ -1.36
YPT1YFL038C ERG20P08524 352 aaKnown RBP6.53□□□□□ -1.36
YPT1YFL038C CIT2P08679 460 aa6.53□□□□□ -1.36
YPT1YFL038C MIS1P09440 975 aaKnown RBP6.53□□□□□ -1.36
YPT1YFL038C TUB1P09733 447 aaKnown RBP6.53□□□□□ -1.36
YPT1YFL038C NMT1P14743 455 aa6.53□□□□□ -1.36
YPT1YFL038C PHO87P25360 923 aa6.53□□□□□ -1.36
YPT1YFL038C YCR090CP25654 182 aaKnown RBP6.53□□□□□ -1.36
YPT1YFL038C DSS4P32601 143 aa6.53□□□□□ -1.36
YPT1YFL038C PEP7P32609 515 aa6.53□□□□□ -1.36
YPT1YFL038C MRS6P32864 603 aaKnown RBP6.53□□□□□ -1.36
YPT1YFL038C BCK2P33306 851 aa6.53□□□□□ -1.36
YPT1YFL038C ASK1P35734 292 aa6.53□□□□□ -1.36
YPT1YFL038C VRP1P37370 817 aa6.53□□□□□ -1.36
YPT1YFL038C SCS2P40075 244 aaKnown RBP6.53□□□□□ -1.36
YPT1YFL038C RTT101P47050 842 aa6.53□□□□□ -1.36
YPT1YFL038C AIF1P52923 378 aa6.53□□□□□ -1.36
YPT1YFL038C YGL108CP53139 140 aa6.53□□□□□ -1.36
YPT1YFL038C NOP19P53317 196 aaPredicted RBP6.53□□□□□ -1.36
YPT1YFL038C COP1P53622 1201 aaKnown RBP6.53□□□□□ -1.36
YPT1YFL038C YNL010WP53981 241 aaKnown RBP6.53□□□□□ -1.36
YPT1YFL038C REX2P54964 269 aaKnown RBP6.53□□□□□ -1.36
YPT1YFL038C TRS31Q03337 283 aa6.53□□□□□ -1.36
YPT1YFL038C DYN3Q04949 312 aa6.53□□□□□ -1.36
YPT1YFL038C HEL2Q05580 639 aaKnown RBP6.53□□□□□ -1.36
YPT1YFL038C GGA1Q06336 557 aa6.53□□□□□ -1.36
YPT1YFL038C ATG17Q06410 417 aa6.53□□□□□ -1.36
YPT1YFL038C CMR1Q12510 522 aaKnown RBP6.53□□□□□ -1.36
YPT1YFL038C AFI1Q99222 893 aa6.53□□□□□ -1.36
YPT1YFL038C NHA1Q99271 985 aa6.53□□□□□ -1.36
YPT1YFL038C SPE1P08432 466 aa6.52□□□□□ -1.37
YPT1YFL038C GLN4P13188 809 aaKnown RBP6.52□□□□□ -1.37
YPT1YFL038C ACO1P19414 778 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
YPT1YFL038C CSM1P25651 190 aa6.52□□□□□ -1.37
YPT1YFL038C PHO91P27514 894 aa6.52□□□□□ -1.37
YPT1YFL038C ATP7P30902 174 aa6.52□□□□□ -1.37
YPT1YFL038C CCR4P31384 837 aaKnown RBP6.52□□□□□ -1.37
YPT1YFL038C PAH1P32567 862 aa6.52□□□□□ -1.37
YPT1YFL038C CSE1P33307 960 aa6.52□□□□□ -1.37
YPT1YFL038C HMT1P38074 348 aa6.52□□□□□ -1.37
YPT1YFL038C GRS1P38088 690 aaKnown RBP6.52□□□□□ -1.37
YPT1YFL038C KAP104P38217 918 aaKnown RBP6.52□□□□□ -1.37
YPT1YFL038C SLM4P38247 162 aa6.52□□□□□ -1.37
YPT1YFL038C XDJ1P39102 459 aa6.52□□□□□ -1.37
YPT1YFL038C AFG3P39925 761 aa6.52□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms