RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W DOT6P40059 670 aaKnown RBP1.41□□□□□ -2.18
SMC1YFL008W ERR3P42222 437 aa1.41□□□□□ -2.18
SMC1YFL008W SIP4P46954 829 aa1.41□□□□□ -2.18
SMC1YFL008W TDA9Q04545 1251 aa1.41□□□□□ -2.18
SMC1YFL008W DIA2Q08496 732 aaPredicted RBP1.41□□□□□ -2.18
SMC1YFL008W TRM8Q12009 286 aa1.41□□□□□ -2.18
SMC1YFL008W TUF1P02992 437 aaKnown RBP1.41□□□□□ -2.18
SMC1YFL008W ADE3P07245 946 aaKnown RBP1.41□□□□□ -2.18
SMC1YFL008W MTF2P10849 440 aa1.41□□□□□ -2.18
SMC1YFL008W CDC23P16522 626 aa1.41□□□□□ -2.18
SMC1YFL008W PPE1P38796 400 aa1.41□□□□□ -2.18
SMC1YFL008W NOP2P40991 618 aaKnown RBP1.41□□□□□ -2.18
SMC1YFL008W YJL107CP42947 387 aa1.41□□□□□ -2.18
SMC1YFL008W GAT1P43574 510 aa1.41□□□□□ -2.18
SMC1YFL008W CSL4P53859 292 aaPredicted RBP1.41□□□□□ -2.18
SMC1YFL008W LGE1Q02796 332 aaKnown RBP1.41□□□□□ -2.18
SMC1YFL008W UBP16Q02863 499 aa1.41□□□□□ -2.18
SMC1YFL008W RIM13Q03792 727 aa1.41□□□□□ -2.18
SMC1YFL008W HOF1Q05080 669 aa1.41□□□□□ -2.18
SMC1YFL008W YBR255C-AQ3E776 120 aa1.41□□□□□ -2.18
SMC1YFL008W NUP145P49687 1317 aa1.41□□□□□ -2.18
SMC1YFL008W CBP3P21560 335 aa1.41□□□□□ -2.18
SMC1YFL008W PHO3P24031 467 aa1.41□□□□□ -2.18
SMC1YFL008W STE50P25344 346 aa1.41□□□□□ -2.18
SMC1YFL008W SFP1P32432 683 aa1.41□□□□□ -2.18
SMC1YFL008W BPL1P48445 690 aaPredicted RBP1.41□□□□□ -2.18
SMC1YFL008W SLD3P53135 668 aa1.41□□□□□ -2.18
SMC1YFL008W ESF2P53743 316 aaKnown RBP1.41□□□□□ -2.18
SMC1YFL008W ASI1P54074 624 aa1.41□□□□□ -2.18
SMC1YFL008W GTB1Q04924 702 aa1.41□□□□□ -2.18
SMC1YFL008W BSP1Q06604 576 aa1.41□□□□□ -2.18
SMC1YFL008W TRE2Q08693 809 aa1.41□□□□□ -2.18
SMC1YFL008W ATP4P05626 244 aa1.4□□□□□ -2.19
SMC1YFL008W MRS3P10566 314 aa1.4□□□□□ -2.19
SMC1YFL008W PCK1P10963 549 aa1.4□□□□□ -2.19
SMC1YFL008W PPZ2P33329 710 aa1.4□□□□□ -2.19
SMC1YFL008W APT2P36973 181 aa1.4□□□□□ -2.19
SMC1YFL008W IFA38P38286 347 aa1.4□□□□□ -2.19
SMC1YFL008W OPT1P40897 799 aa1.4□□□□□ -2.19
SMC1YFL008W PKP2P53170 491 aa1.4□□□□□ -2.19
SMC1YFL008W TRS130Q03660 1102 aa1.4□□□□□ -2.19
SMC1YFL008W ECM16Q04217 1267 aaKnown RBP1.4□□□□□ -2.19
SMC1YFL008W CRD1Q07560 283 aa1.4□□□□□ -2.19
SMC1YFL008W ATG9Q12142 997 aa1.4□□□□□ -2.19
SMC1YFL008W NCE102Q12207 173 aaRIP-Chip data1.4□□□□□ -2.19not detected
SMC1YFL008W ADE5,7P07244 802 aaKnown RBP1.4□□□□□ -2.19
SMC1YFL008W YUR1P26725 428 aa1.4□□□□□ -2.19
SMC1YFL008W NTH1P32356 751 aa1.4□□□□□ -2.19
SMC1YFL008W TOM20P35180 183 aa1.4□□□□□ -2.19
SMC1YFL008W RPN11P43588 306 aaKnown RBP1.4□□□□□ -2.19
SMC1YFL008W NGL2Q03264 515 aaKnown RBP1.4□□□□□ -2.19
SMC1YFL008W PPN1Q04119 674 aa1.4□□□□□ -2.19
SMC1YFL008W GPN2Q08726 347 aaPredicted RBP1.4□□□□□ -2.19
SMC1YFL008W YMR084WA2P2R3 262 aa1.39□□□□□ -2.19
SMC1YFL008W GPA1P08539 472 aa1.39□□□□□ -2.19
SMC1YFL008W YER130CP39959 443 aa1.39□□□□□ -2.19
SMC1YFL008W RPS10BP46784 105 aaKnown RBP1.39□□□□□ -2.19
SMC1YFL008W LYS20P48570 428 aaKnown RBP1.39□□□□□ -2.19
SMC1YFL008W YAT1P80235 687 aa1.39□□□□□ -2.19
SMC1YFL008W CEF1Q03654 590 aaPredicted RBP1.39□□□□□ -2.19
SMC1YFL008W SEG1Q04279 960 aa1.39□□□□□ -2.19
SMC1YFL008W PSF3Q12146 194 aa1.39□□□□□ -2.19
SMC1YFL008W RRP6Q12149 733 aaKnown RBP1.39□□□□□ -2.19
SMC1YFL008W VCX1Q99385 411 aa1.39□□□□□ -2.19
SMC1YFL008W TRA1P38811 3744 aa1.39□□□□□ -2.19
SMC1YFL008W RTC1Q08281 1341 aa1.39□□□□□ -2.19
SMC1YFL008W YPK1P12688 680 aaKnown RBP1.39□□□□□ -2.19
SMC1YFL008W SYN8P31377 255 aa1.39□□□□□ -2.19
SMC1YFL008W GND1P38720 489 aaKnown RBP1.39□□□□□ -2.19
SMC1YFL008W YND1P40009 630 aa1.39□□□□□ -2.19
SMC1YFL008W CFD1P40558 293 aa1.39□□□□□ -2.19
SMC1YFL008W RNR4P49723 345 aaKnown RBP1.39□□□□□ -2.19
SMC1YFL008W APM1Q00776 475 aaPredicted RBP1.39□□□□□ -2.19
SMC1YFL008W STP3Q05937 343 aa1.39□□□□□ -2.19
SMC1YFL008W APL5Q08951 932 aaKnown RBP1.39□□□□□ -2.19
SMC1YFL008W YOL087CQ99247 1116 aa1.39□□□□□ -2.19
SMC1YFL008W RPS2P25443 254 aaKnown RBP1.39□□□□□ -2.19
SMC1YFL008W DHR2P36009 735 aaPredicted RBP1.39□□□□□ -2.19
SMC1YFL008W PIL1P53252 339 aaKnown RBP1.39□□□□□ -2.19
SMC1YFL008W WAR1Q03631 944 aa1.39□□□□□ -2.19
SMC1YFL008W IWR1Q07532 353 aaPredicted RBP1.39□□□□□ -2.19
SMC1YFL008W NUR1Q12066 484 aa1.39□□□□□ -2.19
SMC1YFL008W KAR3P17119 729 aa1.38□□□□□ -2.19
SMC1YFL008W CLB2P24869 491 aa1.38□□□□□ -2.19
SMC1YFL008W DMC1P25453 334 aa1.38□□□□□ -2.19
SMC1YFL008W YCL049CP25577 312 aa1.38□□□□□ -2.19
SMC1YFL008W ACA1P39970 489 aa1.38□□□□□ -2.19
SMC1YFL008W ASK10P48361 1146 aa1.38□□□□□ -2.19
SMC1YFL008W SPC105P53148 917 aa1.38□□□□□ -2.19
SMC1YFL008W ICT1Q12385 394 aa1.38□□□□□ -2.19
SMC1YFL008W RRD2Q12461 358 aa1.38□□□□□ -2.19
SMC1YFL008W IKI3Q06706 1349 aaKnown RBP1.38□□□□□ -2.19
SMC1YFL008W YER145C-AA0A023PYF4 145 aa1.38□□□□□ -2.19
SMC1YFL008W SNF1P06782 633 aaKnown RBP1.38□□□□□ -2.19
SMC1YFL008W PET111P08468 800 aa1.38□□□□□ -2.19
SMC1YFL008W BET2P20133 325 aa1.38□□□□□ -2.19
SMC1YFL008W NIC96P34077 839 aa1.38□□□□□ -2.19
SMC1YFL008W FTH1P38310 465 aa1.38□□□□□ -2.19
SMC1YFL008W VBA2P38358 474 aaKnown RBP1.38□□□□□ -2.19
SMC1YFL008W SAP1P39955 897 aaKnown RBP1.38□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms