RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C DCP2P53550 970 aaKnown RBP5.4□□□□□ -1.54
LSM6YDR378C REG1Q00816 1014 aa5.4□□□□□ -1.54
LSM6YDR378C YPL071CQ02864 156 aa5.4□□□□□ -1.54
LSM6YDR378C SNO4Q04902 237 aa5.4□□□□□ -1.54
LSM6YDR378C SPN1Q06505 410 aaPredicted RBP5.4□□□□□ -1.54
LSM6YDR378C BSP1Q06604 576 aa5.4□□□□□ -1.54
LSM6YDR378C HSP33Q08914 237 aaKnown RBP5.4□□□□□ -1.54
LSM6YDR378C LEA1Q08963 238 aaPredicted RBP5.4□□□□□ -1.54
LSM6YDR378C HSP32Q08992 237 aa5.4□□□□□ -1.54
LSM6YDR378C NDJ1Q12366 352 aa5.4□□□□□ -1.54
LSM6YDR378C PFK26P40433 827 aaKnown RBP5.39□□□□□ -1.55
LSM6YDR378C ATP23P53722 227 aa5.39□□□□□ -1.55
LSM6YDR378C ERG8P24521 451 aa5.38□□□□□ -1.55
LSM6YDR378C GFD2P25370 566 aaKnown RBP5.38□□□□□ -1.55
LSM6YDR378C CDC15P27636 974 aa5.38□□□□□ -1.55
LSM6YDR378C GEX2P36173 615 aa5.38□□□□□ -1.55
LSM6YDR378C FTH1P38310 465 aa5.38□□□□□ -1.55
LSM6YDR378C NAB3P38996 802 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
LSM6YDR378C VPS4P52917 437 aa5.38□□□□□ -1.55
LSM6YDR378C MEP3P53390 489 aa5.38□□□□□ -1.55
LSM6YDR378C SVL3Q03088 825 aaKnown RBP5.38□□□□□ -1.55
LSM6YDR378C RAD34Q06665 692 aa5.38□□□□□ -1.55
LSM6YDR378C SWA2Q06677 668 aa5.38□□□□□ -1.55
LSM6YDR378C FUM1P08417 488 aaKnown RBP5.37□□□□□ -1.55
LSM6YDR378C SUI3P09064 285 aaKnown RBP5.37□□□□□ -1.55
LSM6YDR378C NUP1P20676 1076 aa5.37□□□□□ -1.55
LSM6YDR378C CHS3P29465 1165 aa5.37□□□□□ -1.55
LSM6YDR378C CBF2P32504 956 aa5.37□□□□□ -1.55
LSM6YDR378C ATF1P40353 525 aa5.37□□□□□ -1.55
LSM6YDR378C UBP7P40453 1071 aa5.37□□□□□ -1.55
LSM6YDR378C ASG1P40467 964 aa5.37□□□□□ -1.55
LSM6YDR378C ADE16P54113 591 aaKnown RBP5.37□□□□□ -1.55
LSM6YDR378C FCP1Q03254 732 aa5.37□□□□□ -1.55
LSM6YDR378C COQ11Q05892 277 aa5.37□□□□□ -1.55
LSM6YDR378C CRN1Q06440 651 aa5.37□□□□□ -1.55
LSM6YDR378C TPO3Q06451 622 aa5.37□□□□□ -1.55
LSM6YDR378C LYS21Q12122 440 aaKnown RBP5.37□□□□□ -1.55
LSM6YDR378C YNL162W-AQ3E7A8 72 aa5.37□□□□□ -1.55
LSM6YDR378C YOL087CQ99247 1116 aa5.37□□□□□ -1.55
LSM6YDR378C SRB5P32585 307 aa5.36□□□□□ -1.55
LSM6YDR378C IMD2P38697 523 aaKnown RBP5.36□□□□□ -1.55
LSM6YDR378C PHM8P40025 321 aa5.36□□□□□ -1.55
LSM6YDR378C BPL1P48445 690 aaPredicted RBP5.36□□□□□ -1.55
LSM6YDR378C IMD3P50095 523 aaKnown RBP5.36□□□□□ -1.55
LSM6YDR378C VPS72Q03388 795 aa5.36□□□□□ -1.55
LSM6YDR378C RCO1Q04779 684 aa5.36□□□□□ -1.55
LSM6YDR378C VCX1Q99385 411 aa5.36□□□□□ -1.55
LSM6YDR378C CET1O13297 549 aaPredicted RBP5.35□□□□□ -1.55
LSM6YDR378C ILS1P09436 1072 aaKnown RBP5.35□□□□□ -1.55
LSM6YDR378C APN1P22936 367 aa5.35□□□□□ -1.55
LSM6YDR378C MAK32P23060 363 aa5.35□□□□□ -1.55
LSM6YDR378C URE2P23202 354 aaKnown RBP5.35□□□□□ -1.55
LSM6YDR378C MSS51P32335 436 aa5.35□□□□□ -1.55
LSM6YDR378C GSH1P32477 678 aa5.35□□□□□ -1.55
LSM6YDR378C SWE1P32944 819 aa5.35□□□□□ -1.55
LSM6YDR378C PSD1P39006 500 aa5.35□□□□□ -1.55
LSM6YDR378C YJR061WP40355 935 aa5.35□□□□□ -1.55
LSM6YDR378C MNT3P40549 630 aa5.35□□□□□ -1.55
LSM6YDR378C SNU56Q03782 492 aaKnown RBP5.35□□□□□ -1.55
LSM6YDR378C THI3Q07471 609 aa5.35□□□□□ -1.55
LSM6YDR378C SKM1Q12469 655 aa5.35□□□□□ -1.55
LSM6YDR378C PGK1P00560 416 aaKnown RBP5.34□□□□□ -1.55
LSM6YDR378C YSP3P25036 478 aa5.34□□□□□ -1.55
LSM6YDR378C MRP20P32387 263 aa5.34□□□□□ -1.55
LSM6YDR378C LHS1P36016 881 aa5.34□□□□□ -1.55
LSM6YDR378C MRX1P40050 688 aa5.34□□□□□ -1.55
LSM6YDR378C TMA108P40462 946 aa5.34□□□□□ -1.55
LSM6YDR378C DPH1P40487 425 aaKnown RBP5.34□□□□□ -1.55
LSM6YDR378C BSC5P53755 489 aa5.34□□□□□ -1.55
LSM6YDR378C LGE1Q02796 332 aaKnown RBP5.34□□□□□ -1.55
LSM6YDR378C THI7Q05998 598 aa5.34□□□□□ -1.55
LSM6YDR378C YLR111WQ12528 110 aa5.34□□□□□ -1.55
LSM6YDR378C RPB2P08518 1224 aaKnown RBP5.33□□□□□ -1.56
LSM6YDR378C SOF1P33750 489 aaKnown RBP5.33□□□□□ -1.56
LSM6YDR378C KTR3P38130 404 aaPredicted RBP5.33□□□□□ -1.56
LSM6YDR378C CIN1P40987 1014 aa5.33□□□□□ -1.56
LSM6YDR378C IRC7P43623 340 aa5.33□□□□□ -1.56
LSM6YDR378C ORC5P50874 479 aa5.33□□□□□ -1.56
LSM6YDR378C ENT1Q12518 454 aa5.33□□□□□ -1.56
LSM6YDR378C MRP2P10663 115 aaPredicted RBP5.32□□□□□ -1.56
LSM6YDR378C PCT1P13259 424 aa5.32□□□□□ -1.56
LSM6YDR378C PRE8P23639 250 aa5.32□□□□□ -1.56
LSM6YDR378C YEL068CP39977 110 aa5.32□□□□□ -1.56
LSM6YDR378C SNO3P43544 222 aa5.32□□□□□ -1.56
LSM6YDR378C NMD5P46970 1048 aa5.32□□□□□ -1.56
LSM6YDR378C YPR003CP53394 754 aa5.32□□□□□ -1.56
LSM6YDR378C MUB1Q03162 620 aa5.32□□□□□ -1.56
LSM6YDR378C SEG1Q04279 960 aa5.32□□□□□ -1.56
LSM6YDR378C TMA64Q04600 565 aaKnown RBP5.32□□□□□ -1.56
LSM6YDR378C PSK2Q08217 1101 aa5.32□□□□□ -1.56
LSM6YDR378C YDR056CQ12025 205 aa5.32□□□□□ -1.56
LSM6YDR378C YOR019WQ99248 730 aa5.32□□□□□ -1.56
LSM6YDR378C ALY1P36117 915 aa5.31□□□□□ -1.56
LSM6YDR378C NTR2P36118 322 aaPredicted RBP5.31□□□□□ -1.56
LSM6YDR378C AAP1P37898 856 aaKnown RBP5.31□□□□□ -1.56
LSM6YDR378C SEC31P38968 1273 aaKnown RBP5.31□□□□□ -1.56
LSM6YDR378C IME4P41833 600 aa5.31□□□□□ -1.56
LSM6YDR378C ARC1P46672 376 aaKnown RBP5.31□□□□□ -1.56
LSM6YDR378C YBR085C-AO43137 85 aa5.3□□□□□ -1.56
LSM6YDR378C CDC24P11433 854 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms