RNA–Protein interactions for RNA: YDR198C

RKM2, Transcript of Ribosomal protein lysine methyltransferase, yeast

Gene RKM2, Length 1,440 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RKM2	YDR198C	PSF3	Q12146	194 aa		4.87	□□□□□ -1.63
RKM2	YDR198C	NBP2	Q12163	236 aa		4.87	□□□□□ -1.63
RKM2	YDR198C	KRE5	P22023	1365 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	NOT3	P06102	836 aa	Known RBP	4.86	□□□□□ -1.63
RKM2	YDR198C	BIK1	P11709	440 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	DBP3	P20447	523 aa	Known RBP	4.86	□□□□□ -1.63
RKM2	YDR198C	MIH1	P23748	554 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	CLB3	P24870	427 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	PRD1	P25375	712 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	PHO91	P27514	894 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	PEP3	P27801	918 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	YJU2	P28320	278 aa	Predicted RBP	4.86	□□□□□ -1.63
RKM2	YDR198C	MEI5	P32489	222 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	DOA4	P32571	926 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	OAF3	P36023	863 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	PEX32	P38292	413 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	YHR202W	P38887	602 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	HXT6	P39003	570 aa	Known RBP	4.86	□□□□□ -1.63
RKM2	YDR198C	HXT7	P39004	570 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	SDS3	P40505	327 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	NAS2	P40555	220 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	YFL052W	P43551	465 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	NIT3	P49954	291 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	VPS75	P53853	264 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	YNL144C	P53907	740 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	YNL050C	P53952	270 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	RKM2	Q03942	479 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	DON1	Q05610	365 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	KAP95	Q06142	861 aa	Known RBP	4.86	□□□□□ -1.63
RKM2	YDR198C	ARR1	Q06596	294 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	RSB1	Q08417	382 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	MET7	Q08645	548 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	MCH5	Q08777	521 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	PSY3	Q12318	242 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	TAD3	Q9URQ3	322 aa		4.86	□□□□□ -1.63
RKM2	YDR198C	HEM13	P11353	328 aa	Known RBP	4.85	□□□□□ -1.63
RKM2	YDR198C	CLN1	P20437	546 aa		4.85	□□□□□ -1.63
RKM2	YDR198C	SEC65	P29478	273 aa		4.85	□□□□□ -1.63
RKM2	YDR198C	CCR4	P31384	837 aa	Known RBP	4.85	□□□□□ -1.63
RKM2	YDR198C	ASF2	P32448	525 aa	Predicted RBP	4.85	□□□□□ -1.63
RKM2	YDR198C	REC104	P33323	182 aa		4.85	□□□□□ -1.63
RKM2	YDR198C	EMC3	P36039	253 aa		4.85	□□□□□ -1.63
RKM2	YDR198C	ECM4	P36156	370 aa		4.85	□□□□□ -1.63
RKM2	YDR198C	IFA38	P38286	347 aa		4.85	□□□□□ -1.63
RKM2	YDR198C	YHL017W	P38745	532 aa		4.85	□□□□□ -1.63
RKM2	YDR198C	TCD1	P38756	429 aa		4.85	□□□□□ -1.63
RKM2	YDR198C	YDR089W	P38966	869 aa		4.85	□□□□□ -1.63
RKM2	YDR198C	LCL3	P53153	274 aa		4.85	□□□□□ -1.63
RKM2	YDR198C	DUO1	P53168	247 aa	Known RBP	4.85	□□□□□ -1.63
RKM2	YDR198C	GTB1	Q04924	702 aa		4.85	□□□□□ -1.63
RKM2	YDR198C	MRD1	Q06106	887 aa	Known RBP	4.85	□□□□□ -1.63
RKM2	YDR198C	RCN2	Q12044	265 aa		4.85	□□□□□ -1.63
RKM2	YDR198C	CWC2	Q12046	339 aa	Predicted RBP	4.85	□□□□□ -1.63
RKM2	YDR198C	SPE3	Q12074	293 aa	Known RBP	4.85	□□□□□ -1.63
RKM2	YDR198C	TAF3	Q12297	353 aa		4.85	□□□□□ -1.63
RKM2	YDR198C	YBR126W-A	Q8TGU7	68 aa		4.85	□□□□□ -1.63
RKM2	YDR198C	YOR111W	Q99210	232 aa		4.85	□□□□□ -1.63
RKM2	YDR198C	BCK1	Q01389	1478 aa		4.85	□□□□□ -1.63
RKM2	YDR198C	BET2	P20133	325 aa		4.84	□□□□□ -1.63
RKM2	YDR198C	AFG2	P32794	780 aa		4.84	□□□□□ -1.63
RKM2	YDR198C	SRB2	P34162	210 aa		4.84	□□□□□ -1.63
RKM2	YDR198C	PXL1	P36166	706 aa		4.84	□□□□□ -1.63
RKM2	YDR198C	YBR138C	P38277	524 aa		4.84	□□□□□ -1.63
RKM2	YDR198C	YHR097C	P38809	366 aa	Known RBP	4.84	□□□□□ -1.63
RKM2	YDR198C	YJR061W	P40355	935 aa		4.84	□□□□□ -1.63
RKM2	YDR198C	YIL089W	P40500	205 aa		4.84	□□□□□ -1.63
RKM2	YDR198C	TCB2	P48231	1178 aa		4.84	□□□□□ -1.63
RKM2	YDR198C	PUS4	P48567	403 aa	Known RBP	4.84	□□□□□ -1.63
RKM2	YDR198C	LYS4	P49367	693 aa	Predicted RBP	4.84	□□□□□ -1.63
RKM2	YDR198C	BRE5	P53741	515 aa	Known RBP	4.84	□□□□□ -1.63
RKM2	YDR198C	PRO2	P54885	456 aa	Known RBP	4.84	□□□□□ -1.63
RKM2	YDR198C	RRT8	Q08219	342 aa		4.84	□□□□□ -1.63
RKM2	YDR198C	CTI6	Q08923	506 aa		4.84	□□□□□ -1.63
RKM2	YDR198C	GLE1	Q12315	538 aa		4.84	□□□□□ -1.63
RKM2	YDR198C	YRF1-4	O13559	1382 aa		4.84	□□□□□ -1.64
RKM2	YDR198C	APE1	P14904	514 aa		4.83	□□□□□ -1.64
RKM2	YDR198C	CLC1	P17891	233 aa		4.83	□□□□□ -1.64
RKM2	YDR198C	CWH43	P25618	953 aa		4.83	□□□□□ -1.64
RKM2	YDR198C	PER1	P25625	357 aa		4.83	□□□□□ -1.64
RKM2	YDR198C	UBP11	P36026	717 aa		4.83	□□□□□ -1.64
RKM2	YDR198C	ERT1	P38140	529 aa		4.83	□□□□□ -1.64
RKM2	YDR198C	GDT1	P38301	280 aa	Predicted RBP	4.83	□□□□□ -1.64
RKM2	YDR198C	YHR054C	P38780	354 aa		4.83	□□□□□ -1.64
RKM2	YDR198C	SCS2	P40075	244 aa	Known RBP	4.83	□□□□□ -1.64
RKM2	YDR198C	SIP5	P40210	489 aa	Known RBP	4.83	□□□□□ -1.64
RKM2	YDR198C	FET5	P43561	622 aa		4.83	□□□□□ -1.64
RKM2	YDR198C	RRT6	P53117	311 aa	Predicted RBP	4.83	□□□□□ -1.64
RKM2	YDR198C	PLB2	Q03674	706 aa		4.83	□□□□□ -1.64
RKM2	YDR198C	GPM3	Q12326	303 aa		4.83	□□□□□ -1.64
RKM2	YDR198C	AHC1	Q12433	566 aa		4.83	□□□□□ -1.64
RKM2	YDR198C	PTC5	Q12511	572 aa		4.83	□□□□□ -1.64
RKM2	YDR198C	RPS21B	Q3E754	87 aa	Known RBP	4.83	□□□□□ -1.64
RKM2	YDR198C	CET1	O13297	549 aa	Predicted RBP	4.82	□□□□□ -1.64
RKM2	YDR198C	TDH1	P00360	332 aa	Known RBP	4.82	□□□□□ -1.64
RKM2	YDR198C	CDC24	P11433	854 aa	Predicted RBP	4.82	□□□□□ -1.64
RKM2	YDR198C	SPS22	P25380	463 aa		4.82	□□□□□ -1.64
RKM2	YDR198C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
RKM2	YDR198C	YBL029W	P38201	376 aa		4.82	□□□□□ -1.64
RKM2	YDR198C	SRP68	P38687	599 aa	Known RBP	4.82	□□□□□ -1.64
RKM2	YDR198C	KEL1	P38853	1164 aa	Known RBP	4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms